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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041035 ID=TCONS_00041035|Name=TCONS_00041035|organism=Clytia hemisphaerica|type=transcript|length=1255bp
atcctgtctatttttatttttagaaatctaaTGAGAAATTATAGATAAGA
AAAAAGATACAAGAAGGCAGAAAATATGACTTTTGGGGAAGATGAAATAC
ACATTATGTCCATCGGTCCTTCAGGCGTAGGAAAATCAACCATTGGAAAT
AAGTTGTTGAAGCTAACATCTAAAGATCCTGAATACCTGAATGCTAGTGC
GTCAGCAGAAAGCTGCACTCAAAAGCCAGCTACTGTTACATCTGGTAAAA
TTGTTTATACAGATGTGCCCGGAATCCCAGATACCAACCCAGCGAACACA
AAGCTATTCTACAATATGATTATCAATGAAGCAAAAGCTCCAATGACTGC
TATCTTCTTTGTCTTCGCTGTTGATATGCGAATGGACAAACCAACTAAAG
ATCGCATCAAACAATGTTCATTGCTGTTTAGTGAAATCAATAAATGCTCT
GCCGCCAAAATCCTGATTCTAAACGATATGAGAGCTTGGTGTAATCCAAA
CGGTTTAGATGATGATAGTGATGAATATCAGGAGGAGAAAGCGCTACATG
ATCAGGTCCGCCTGGAAGTCCAAGAAGCTTATAAGAATGACATCATCAAA
GCAACATGTATCGAGTTTTATTGCACTAAGGTTATCTATGGTCTCAATAG
CAAGATCAATACAGATAATAACATGGAGGCTGTTATGAAATATCTCAAGT
TGACTCTTCAATCATTCCCGTGTGATGCATCGCCACATTTGCGTACTTTT
GAAGAACTGGAAAAAGATGTCATGAAAGCCAAACAAAACCAAGATTATGA
GCAGCGGCTCATCAATGAAGAAGATAAGCACATTGCCAGCTTGGAAACCA
ACATTGAAATCCTCAAAATCACCCTCCAAGCTGCAACTGCGGTAGCTGGC
ACGGCTGGAGCGGCTGCCAGTATTGCCAATTTCTTTACATTTGGTACAGC
TGCAGTTGTGGGTGGTCTTGTCGCTGGTGGTGCCACAAGTGTGGCAACAT
CAGCGAAAATAGCGATTGCTGCCAAAGAAAAAGAGCTAGAAGAtgccaaa
gaaaaaataaataaacaaaatttggaTGTAGCtgtaaaaacattcgaaac
acAATATCAATTATTCGACGAGTTAAAAAAAGAACTTAATTGTCAATAAA
TAACAATATACTgaaagttaaaatatttccatttaattaaaataatttca
aaatatttcgaaaatgaAAACTGTTCAGGTGTGAAACAGAGTTTCGACTT
ACCTT Run BLAST on NCBI protein sequence of TCONS_00041035-protein >TCONS_00041035-protein ID=TCONS_00041035-protein|Name=TCONS_00041035-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
MTFGEDEIHIMSIGPSGVGKSTIGNKLLKLTSKDPEYLNASASAESCTQK
PATVTSGKIVYTDVPGIPDTNPANTKLFYNMIINEAKAPMTAIFFVFAVD
MRMDKPTKDRIKQCSLLFSEINKCSAAKILILNDMRAWCNPNGLDDDSDE
YQEEKALHDQVRLEVQEAYKNDIIKATCIEFYCTKVIYGLNSKINTDNNM
EAVMKYLKLTLQSFPCDASPHLRTFEELEKDVMKAKQNQDYEQRLINEED
KHIASLETNIEILKITLQAATAVAGTAGAAASIANFFTFGTAAVVGGLVA
GGATSVATSAKIAIAAKEKELEDAKEKINKQNLDVAVKTFETQYQLFDEL
KKELNCQ Run BLAST on NCBI transcript from alignment at sc0002675:1888..3142 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041035 ID=TCONS_00041035|Name=TCONS_00041035|organism=Clytia hemisphaerica|type=transcript|length=1255bp|location=Sequence derived from alignment at sc0002675:1888..3142 (Clytia hemisphaerica)
AAGGTAAGTCGAAACTCTGTTTCACACCTGAACAGTTTtcattttcgaaa
tattttgaaattattttaattaaatggaaatattttaactttcAGTATAT
TGTTATTTATTGACAATTAAGTTCTTTTTTTAACTCGTCGAATAATTGAT
ATTgtgtttcgaatgtttttacaGCTACAtccaaattttgtttatttatt
ttttctttggcaTCTTCTAGCTCTTTTTCTTTGGCAGCAATCGCTATTTT
CGCTGATGTTGCCACACTTGTGGCACCACCAGCGACAAGACCACCCACAA
CTGCAGCTGTACCAAATGTAAAGAAATTGGCAATACTGGCAGCCGCTCCA
GCCGTGCCAGCTACCGCAGTTGCAGCTTGGAGGGTGATTTTGAGGATTTC
AATGTTGGTTTCCAAGCTGGCAATGTGCTTATCTTCTTCATTGATGAGCC
GCTGCTCATAATCTTGGTTTTGTTTGGCTTTCATGACATCTTTTTCCAGT
TCTTCAAAAGTACGCAAATGTGGCGATGCATCACACGGGAATGATTGAAG
AGTCAACTTGAGATATTTCATAACAGCCTCCATGTTATTATCTGTATTGA
TCTTGCTATTGAGACCATAGATAACCTTAGTGCAATAAAACTCGATACAT
GTTGCTTTGATGATGTCATTCTTATAAGCTTCTTGGACTTCCAGGCGGAC
CTGATCATGTAGCGCTTTCTCCTCCTGATATTCATCACTATCATCATCTA
AACCGTTTGGATTACACCAAGCTCTCATATCGTTTAGAATCAGGATTTTG
GCGGCAGAGCATTTATTGATTTCACTAAACAGCAATGAACATTGTTTGAT
GCGATCTTTAGTTGGTTTGTCCATTCGCATATCAACAGCGAAGACAAAGA
AGATAGCAGTCATTGGAGCTTTTGCTTCATTGATAATCATATTGTAGAAT
AGCTTTGTGTTCGCTGGGTTGGTATCTGGGATTCCGGGCACATCTGTATA
AACAATTTTACCAGATGTAACAGTAGCTGGCTTTTGAGTGCAGCTTTCTG
CTGACGCACTAGCATTCAGGTATTCAGGATCTTTAGATGTTAGCTTCAAC
AACTTATTTCCAATGGTTGATTTTCCTACGCCTGAAGGACCGATGGACAT
AATGTGTATTTCATCTTCCCCAAAAGTCATATTTTCTGCCTTCTTGTATC
TTTTTTCTTATCTATAATTTCTCAttagatttctaaaaataaaaatagac
aggat Coding sequence (CDS) from alignment at sc0002675:1888..3142 >TCONS_00041035 ID=TCONS_00041035|Name=TCONS_00041035|organism=Clytia hemisphaerica|type=CDS|length=1074bp|location=Sequence derived from alignment at sc0002675:1888..3142 (Clytia hemisphaerica)
TTATTGACAATTAAGTTCTTTTTTTAACTCGTCGAATAATTGATATTgtg
tttcgaatgtttttacaGCTACAtccaaattttgtttatttattttttct
ttggcaTCTTCTAGCTCTTTTTCTTTGGCAGCAATCGCTATTTTCGCTGA
TGTTGCCACACTTGTGGCACCACCAGCGACAAGACCACCCACAACTGCAG
CTGTACCAAATGTAAAGAAATTGGCAATACTGGCAGCCGCTCCAGCCGTG
CCAGCTACCGCAGTTGCAGCTTGGAGGGTGATTTTGAGGATTTCAATGTT
GGTTTCCAAGCTGGCAATGTGCTTATCTTCTTCATTGATGAGCCGCTGCT
CATAATCTTGGTTTTGTTTGGCTTTCATGACATCTTTTTCCAGTTCTTCA
AAAGTACGCAAATGTGGCGATGCATCACACGGGAATGATTGAAGAGTCAA
CTTGAGATATTTCATAACAGCCTCCATGTTATTATCTGTATTGATCTTGC
TATTGAGACCATAGATAACCTTAGTGCAATAAAACTCGATACATGTTGCT
TTGATGATGTCATTCTTATAAGCTTCTTGGACTTCCAGGCGGACCTGATC
ATGTAGCGCTTTCTCCTCCTGATATTCATCACTATCATCATCTAAACCGT
TTGGATTACACCAAGCTCTCATATCGTTTAGAATCAGGATTTTGGCGGCA
GAGCATTTATTGATTTCACTAAACAGCAATGAACATTGTTTGATGCGATC
TTTAGTTGGTTTGTCCATTCGCATATCAACAGCGAAGACAAAGAAGATAG
CAGTCATTGGAGCTTTTGCTTCATTGATAATCATATTGTAGAATAGCTTT
GTGTTCGCTGGGTTGGTATCTGGGATTCCGGGCACATCTGTATAAACAAT
TTTACCAGATGTAACAGTAGCTGGCTTTTGAGTGCAGCTTTCTGCTGACG
CACTAGCATTCAGGTATTCAGGATCTTTAGATGTTAGCTTCAACAACTTA
TTTCCAATGGTTGATTTTCCTACGCCTGAAGGACCGATGGACATAATGTG
TATTTCATCTTCCCCAAAAGTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041035-exon-sc0002675-1491911889:1888..3142 | TCONS_00041035-exon-sc0002675-1491911889:1888..3142 | Clytia hemisphaerica | exon |
| TCONS_00041035-exon-sc0002675-1510915933:1888..3142 | TCONS_00041035-exon-sc0002675-1510915933:1888..3142 | Clytia hemisphaerica | exon |
| TCONS_00041035-exon-sc0002675-1575043694:1888..3142 | TCONS_00041035-exon-sc0002675-1575043694:1888..3142 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002675 | supercontig | sc0002675:1888..3142 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
The following BLAST results are available for this feature:
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