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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041006 ID=TCONS_00041006|Name=TCONS_00041006|organism=Clytia hemisphaerica|type=transcript|length=922bp
cctgtataCTCTTTTATGTGCCTTCATAGCCTCTGAATTTTCACATCCCC
ACTAAGTTTCTCCAAATTTTGTGAGACCAAGGGCTAcctaatttattttt
cattttcccataAAGTTGTGGAATCATCAAAATAAGCATTTTGATGAATA
CACTGACTTTTTGTGTACACATGCCATAACATAAGTTCAAAGTGTTAGGT
TAGGAATTTAAAAGAACTTGACAAAAAGATACCATTATACCCCATTCCAT
AACCTTGTGATTGCAGGTTATGCACCGCCCTTATTTACAAAAACCAAAAA
Ccgatcattttgaatgaaaacaaaaagttataaggggcgcgctatcagtg
aaagctATCGTGACATTTTATGAtagaaagtttgattgataaacttggtg
gagatatcaaaacaaatttgttatcaaaaagatttaacagtaagtgaaaa
tacagaccagatatcaaccagtcccatgattcgaccaatcgtcccaagtt
agagcagttaacCGTATCCTCAATCATTGCATCACAGCGAaagatttgtt
ttcattttagtttgtatctttgaatgaccccatcggatttaggctgggct
gtcggatttaggaccactcacgatATGGATTTCTTTAATAGAACTTAATC
gaaactttatattttgaagaatttatgAGTATTCAATTAAAGTTTGACAA
CCAAACTTAGTCGAACATTATTCGGacaacaaagtttgattttgacaaca
aattttcaTCCAGTGGGTGGTGTTCTTTCGAGAATCTGGCTTCCAGAATT
GTCCTCCTCTCTGTGACTTGGTTTTACCCTTGTTCTAGTAGCTTGTACCT
GCATCCTCGTCCAGACGACTTGTAGCTTTCTAGTTTTTTATTACAcatac
ttttttttttcctCACTCTTTC Run BLAST on NCBI transcript from alignment at sc0002659:9353..10274 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041006 ID=TCONS_00041006|Name=TCONS_00041006|organism=Clytia hemisphaerica|type=transcript|length=922bp|location=Sequence derived from alignment at sc0002659:9353..10274 (Clytia hemisphaerica)
GAAAGAGTGaggaaaaaaaaaagtatgTGTAATAAAAAACTAGAAAGCTA
CAAGTCGTCTGGACGAGGATGCAGGTACAAGCTACTAGAACAAGGGTAAA
ACCAAGTCACAGAGAGGAGGACAATTCTGGAAGCCAGATTCTCGAAAGAA
CACCACCCACTGGAtgaaaatttgttgtcaaaatcaaactttgttgtCCG
AATAATGTTCGACTAAGTTTGGTTGTCAAACTTTAATTGAATACTcataa
attcttcaaaatataaagtttcGATTAAGTTCTATTAAAGAAATCCATat
cgtgagtggtcctaaatccgacagcccagcctaaatccgatggggtcatt
caaagatacaaactaaaatgaaaacaaatcttTCGCTGTGATGCAATGAT
TGAGGATACGgttaactgctctaacttgggacgattggtcgaatcatggg
actggttgatatctggtctgtattttcacttactgttaaatctttttgat
aacaaatttgttttgatatctccaccaagtttatcaatcaaactttctaT
CATAAAATGTCACGATagctttcactgatagcgcgccccttataactttt
tgttttcattcaaaatgatcgGTTTTTGGTTTTTGTAAATAAGGGCGGTG
CATAACCTGCAATCACAAGGTTATGGAATGGGGTATAATGGTATCTTTTT
GTCAAGTTCTTTTAAATTCCTAACCTAACACTTTGAACTTATGTTATGGC
ATGTGTACACAAAAAGTCAGTGTATTCATCAAAATGCTTATTTTGATGAT
TCCACAACTTtatgggaaaatgaaaaataaattaggTAGCCCTTGGTCTC
ACAAAATTTGGAGAAACTTAGTGGGGATGTGAAAATTCAGAGGCTATGAA
GGCACATAAAAGAGtatacagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041006-exon-sc0002659-1491911889:9353..10274 | TCONS_00041006-exon-sc0002659-1491911889:9353..10274 | Clytia hemisphaerica | exon |
| TCONS_00041006-exon-sc0002659-1510915933:9353..10274 | TCONS_00041006-exon-sc0002659-1510915933:9353..10274 | Clytia hemisphaerica | exon |
| TCONS_00041006-exon-sc0002659-1575043694:9353..10274 | TCONS_00041006-exon-sc0002659-1575043694:9353..10274 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002659 | supercontig | sc0002659:9353..10274 . |
Blast
The following BLAST results are available for this feature:
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