TCONS_00040980 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040980
Unique NameTCONS_00040980
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040980 ID=TCONS_00040980|Name=TCONS_00040980|organism=Clytia hemisphaerica|type=transcript|length=146bp
CTTTAATACATTCTGTATTCTATGACCTCAAAGGAAAAGCTCACTTTTAT
TGGAAAACAGAAATAAGTATAGCACTCAAATCTCTTGACCAGATTCCGat
taaaatgtctttttttgaaCTTCCTAACTGAATACATAACTTTGAC
Run BLAST on NCBI

transcript from alignment at sc0002651:7243..7388

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040980 ID=TCONS_00040980|Name=TCONS_00040980|organism=Clytia hemisphaerica|type=transcript|length=146bp|location=Sequence derived from alignment at sc0002651:7243..7388 (Clytia hemisphaerica)
GTCAAAGTTATGTATTCAGTTAGGAAGttcaaaaaaagacattttaatCG
GAATCTGGTCAAGAGATTTGAGTGCTATACTTATTTCTGTTTTCCAATAA
AAGTGAGCTTTTCCTTTGAGGTCATAGAATACAGAATGTATTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025020XLOC_025020Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040980-exon-sc0002651-1491911889:7243..7388TCONS_00040980-exon-sc0002651-1491911889:7243..7388Clytia hemisphaericaexon
TCONS_00040980-exon-sc0002651-1510915933:7243..7388TCONS_00040980-exon-sc0002651-1510915933:7243..7388Clytia hemisphaericaexon
TCONS_00040980-exon-sc0002651-1575043694:7243..7388TCONS_00040980-exon-sc0002651-1575043694:7243..7388Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002651supercontigsc0002651:7243..7388 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040980 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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