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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040977 ID=TCONS_00040977|Name=TCONS_00040977|organism=Clytia hemisphaerica|type=transcript|length=422bp
GGtagtaaaaaattttttccattttttgtcacaccaccacggtagtaaac
gtcattatgtctgagattttactaccgaccccccctgcCAGTCAACCAAT
GATTATCAATTGATGGTCAATCTGTCAATTAATAAGTAATTGATCATATT
AGCAATCTATGATCAAACATAATCAGGATCTTGAGGGGGGGTTGAATCAG
TCAGGACttcctttcactttatcgatattacatGGCAGTGTGCGCTATAA
Tattttggtttcgctttcgattttaaaaggatgttgacaaaatatgcaca
gccctgacaaaatatgcacaaCATTGATTTTGACAAcataGATGACGATG
AACGTGAATGTACTGACATTCGTACTGACAATATACTGACTGAATTGACA
TAAACAAAACACACCAGAAANN Run BLAST on NCBI transcript from alignment at sc0002647:18802..19961- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040977 ID=TCONS_00040977|Name=TCONS_00040977|organism=Clytia hemisphaerica|type=transcript|length=1160bp|location=Sequence derived from alignment at sc0002647:18802..19961- (Clytia hemisphaerica)
GGTAGTAAAAAATTTTTTCCATTTTTTGTCACACCACCACGGTAGTAAAC
GTCATTATGTCTGAGATTTTACTACCGACCCCCCCTGCCAGTCAACCAAT
GATTATCAATTGATGGTCAATCTGTCAATTAATAAGTAATTGATCATATT
AGCAATCTATGATCAAACATAATCAGGATCTTGAGGGGGGGTTGAATCAG
TCAGGACTTCCTTTCACTTTATCGATATTACATGGCAGTGTGCGCTATAA
TATTTTGGTTTCGCTTTCGATTTTAAAAGGATGTTGACAAAATATGCACA
GCCCTGACAAAATATGCACAACATTGATTTTGACAACATGTAAATATTTC
TTTTCATCTTGAGATTTTGAAATAAGAGCAGAAGAGAGTCAAATTTAATG
TTTGTTTCCCATCTGGATTATATTAGCTTAGAATATATTATAATACGGTA
ATTTTCATTTTCAATGAAAAATATTTCGGGAATTTTAGGCGAAAATAAAA
TGTTTTTGAAAAAAGTTGTTTCTTCGTTTTTGGTAACCATTTTTACTCTG
TAAAAACAAGCAAAAAGTAGTCAATATTTCTTGTTCTCGGAAAGTGAACC
TGAGAAATACTGATTTGAAATTTTCGGTTCGTCTGAGTCACACACATATA
TCACATATATCATTTATCGTCGTAGAAAAGGAAAGCCTTAACTGCCTTTT
TCAAAATTTTGACTTTTTAACAGAAGCAGATTCTGCAAAAAGTTTGGAAG
AAAAAAAGCCGTATCTCCAAAAAAAAGCTGTATAATTTTCCTAACAGTTT
CTAGAGCAAATTCTAGTAAAATCCAAGAAGAAAAGATTGAAAATTTTTTA
ATGAAATTAGCCATAACTTCATTGGCTGATTTTTTCTTTGCCTAGAACAG
GTTACAGTGGATTGCATATGTCAGAATTTCTTAGAACTCCAAAAAAAGTA
GAGATATATATATAATATATACAATATACAAGAAAATTTTATCATGGATT
TTTGCCCTGGTGGCTAGGTCAGAAGACAACATGAGAGCGACTGTATTCAC
TTCATACAAGAAAATTTTATTTTACAGAGATGACGATGAACGTGAATGTA
CTGACATTCGTACTGACAATATACTGACTGAATTGACATAAACAAAACAC
ACCAGAAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040977-exon-sc0002647-1575043694:19623..19961 | TCONS_00040977-exon-sc0002647-1575043694:19623..19961 | Clytia hemisphaerica | exon |
| TCONS_00040977-exon-sc0002647-1575043694:18802..18884 | TCONS_00040977-exon-sc0002647-1575043694:18802..18884 | Clytia hemisphaerica | exon |
| TCONS_00040977-exon-sc0002647-1510915933:19623..19961 | TCONS_00040977-exon-sc0002647-1510915933:19623..19961 | Clytia hemisphaerica | exon |
| TCONS_00040977-exon-sc0002647-1510915933:18802..18884 | TCONS_00040977-exon-sc0002647-1510915933:18802..18884 | Clytia hemisphaerica | exon |
| TCONS_00040977-exon-sc0002647-1491911889:19623..19961 | TCONS_00040977-exon-sc0002647-1491911889:19623..19961 | Clytia hemisphaerica | exon |
| TCONS_00040977-exon-sc0002647-1491911889:18802..18884 | TCONS_00040977-exon-sc0002647-1491911889:18802..18884 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002647 | supercontig | sc0002647:18802..19961 - |
Blast
The following BLAST results are available for this feature:
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