TCONS_00040976 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040976
Unique NameTCONS_00040976
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5064

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040976 ID=TCONS_00040976|Name=TCONS_00040976|organism=Clytia hemisphaerica|type=transcript|length=5064bp
NNGACTTCAGTCCTCCTGGTTCAACAGACATTGTTGTTCCTTCTGGTTCT
TCTACCTTGACAGACATCTTTGCTCCTGGTTTATCTAGCTCGACAAACGT
ATTTGTTCCTCCTGGTTCTTCTAGCTCAACAAACGTCTTTGGTCCTCCTG
GTAGCAGGCACAAAAGAAAAGAACTTTGTATTGCCACAGGTGTTTATGAG
ATCGAGAAGAAAGAGCTCCAACCCCATGACGTTGTTTCGGTCTACGGCAA
CCCTGAAGACCAGGATGGCATCCAAAAGTTTTGGCTCTTTAGGGTTTTAT
CAACGACCCCGAGAAAGATCCAGGGACATTACCTAATTAAAGAAAACTGC
CCTGAATTCAGAAGAGAATATATGCTTGGCACGACCTGGGAGAAAATCCC
TTTTAAATCTGTCATAAAAGGAAACAAACAAGCACGGCTATACATAATTA
AGATGGAGCAAGATGACcaaaataatttcttcctcCAAGCAGCAACGCAC
GATTTTTTATTTAGGAGTTGCCCTCTCTAGAATTTTCATTCAAGCTGACA
GTAAAATTAGAGAATTAAACAGAAAATTTACAGCTATTACAGGGGGTTCA
TGCAGTTGTATGAGACCATGACACTTACTACTGTGGTGGTCTaaattttc
acaatttaaaTAGCAGTTACTACAGATACGTAGTAACTGCAAATATATTG
TAGTGTTGTAGTAACtgccaaaaaatttttgatatataatttattaatta
ttaatttcaaattatcattgaattttttttggaattttcttcaattttca
gacaagattttaaaattttcataccCCTTGTCCACTCAATCAATTTTTCT
ACAAGAACTGATTGAATGAAACTTTGATATGGAAAAAAAGTACCAAATGg
gtcagaatttcaaaaattactaaaattttgaACCATTAGTTCTGTAATTT
TGGGTAAAAAAGCTAGCAAAGGGTGGTGTATGCAAAATTTTAACTGAAAA
GCAGTTACTACAGAtcgtagtaactgcaaaggggtGGTGGTATGAAATTG
TTGGCTTCAAAAAGACACTTACACATTTATATAAGGAACAAGTTCATAAG
GAACTCAAGGCTGAAAAAGGTCCAAAAagtaaggaattgttaaggaactg
ctcaggccgaggataagaaaacaatttttaatgaaCAGTAAGATTTTTCA
CTTGAACTAGCAATTATCTTGTGTTCTCCAAGTCTTTCGTTGAAATAGTC
GATGTTACCACCAATTTTCATAGTTTCCTTTGAACTATTAGCtttgtaaa
taaggaactcgataaggaactttgaggctgaaattatttataaaaataag
gaactcagAGGCTCAGATCAAAGTTAAGGTTATTACtaatcatgtcttgt
agtactGCATGACCCTCTTGGCTATTATCACGTTTCAagcaaatttgttt
tcaaatatgAGTAGAAAATGTCTTCTGtgtaatgtataattttttctgta
atttttcaaagggatACATATCCGGAACGACTATTGCATGTGAAATAACC
TATAAATTCAGTCCTGTTCAGTCCTTCCGTAGAAGTTTTAAAAGGGCACA
GAAGGGCATGACTAAGATCCAGATTATGTTATtacgtttatttttattta
ggtTATGTATTTAGGAGCAACTTAAATTAGATATGAAAAACGGTCTAATA
GAATATTATTTTATGGTATTTTTCCTGTCACTTCGAATTAACCACAGATG
AGTATTGGGTTGATCAGAAACAAAGAATAATTGCAtaattttttgaatat
cttATGTAATTGCTAGGAGGTGGTAAAATAACTTTATAGTAGAGGGTAGT
GCCTTTCTTGTGAACCTAAGGGTGTTATCACTCTTGGCAAGCAAATTGTG
GGGGACGGTCTAATAGCAAATTGTagtcaacatttttgaaaaatatcata
aacagGGTGGGCTTTATATAAGGTTTTATATAAAATTTATTAATCAGTGG
ACGGAAATAAGACGTAGTTTGAAGAgtggtttttatttttgaaagatgaA
TAAAATCTATCTCAATTTGCACATTGAGTTGTTTATCAATAAGTCTGTTA
CTAATGTTTTGCTGTGTTTCCAAGTGACTTCCGCAAACTCTATCTTGAAA
TTGATTTATAATCTCATTCTTTATTGCCAATAGGGAAGGGATACTTTTAG
CCAGGGAATGGTATTTTCAGTCAAATTTGTAAACGTGGAGGGATGTTAAT
AAATAGAAATAGATAcatattgaaattgaaattttatttcaaatagtATA
AGCATTTCGGCTACGCCATAGTCAGTACAAACATCGAATGGTAAAATCAC
AAATTTCtatctaaaatgttgaaaaaatctaagtttaaAGTCTAATTAtc
tacaaataaaaatttcatttataaaaGCGCCATACAAACGAATCGATAAA
AACGTAAATGCTAATAAAATTATTCTTTAGGGTATATTCAAGTAATGCCA
TTTCTGAAAAGATTGAATTGTTTTATCTCTAGCTGATTGTTAAGTGAAGG
TCCCATGATAGCTATAAATGAAGCTTCtagaaatttccttttttgtcGAA
TACTGGAGCTTTTAAAATACATCTCCAATGAAAATGATGGGtgtattttt
ctttcagatgATTAGCAGGCTCAGAGTTATGCTTGACGTTTTCGGATACA
TATTGCATGAATGttgaaatgggctcttccagaaaaaaactcaTAGGAAG
ATAGATTGtcaaggggtattgaaaaaaccctgaaaaactgccatgtccat
ggTGTGAATTTGTAATGTCCAGGGGCAAACTTTTGTGTCCAGGGAGTCAA
TTTGATGCATGTTGAGGGGTAAAACACGTGTCCAGAGGGtgaaaaataga
aatgtccaggggtacatcactgaaaaaataataaatcctCCATCCCCCCA
TGAACGGTTAACACTTTAACTTCAACTAGATCCTATATGAAATATGAAAC
TATACGAATTCTCTTCTCCTTAGGTAACTATCGAAAAAGACAAGGCAGCC
AAGGtgcaaattggaaaaaaaaaGTTACTTACATTGAGAACGAAATTGAA
CGAAAAAGAAGAAGCGAAGATTTGTTCAGCCAGATAATATCAAAGatGGA
ATACTGGTTCACGCTATGTAAAGCTCCGGCTTCCATCCTGGCTTTCTTTG
ACAATGATCTTCACTATTACGGTACTTCCAACAAAATGAAAGACTTCTGT
GATGATCCAATTGTCAAGAAACGATTCGCTTTTCACATGCGTCACGAAGT
CGAAGATGTTGACAATGATAAAGTCAAGCAATACCCTAAAGGCACATTGG
TCAATCTCTATGGTTGGAAGAAAAAAGGTTCAAAGGAGAAACAGAAAATT
GTTAGATCCTTAGTCAAACCTGGTAAGTTTAAAGGCTTAGGCTACCTGTG
ATTTGCTTTCTTTTATTTAAcctttgctttttttattgatacatacctga
aagaaagaaattttagcTCACCAGTCATTCCGTCAGcttcaatgcaattt
ttcgaaattaatttCGGAGCGtaaggaaactttttttttcgagtttCTTG
TTTGAGTGCTTTTGCCAAAATTCACCTCTCGAACTCTTGAAACTCTCTAA
TTGGTCAATCGTTTAAATTTTGcgtttttcctttttccatcacttaaatt
atatttttttacagTTGAGTCAAAAGGTTGCATTAACTGGAAAACTTGTC
CGTTGTTATCTTGGTGGCCCAGCGATGTTCCGTTCAAAAACCCAACTGGA
ACTCCCAAGATGACAGTTGTTGAGTGTGACAAAGTGATCACCAGTTTTGT
TTACGGAGAACTTGTTCACTTGCCCGAagatttgattttggaatcGGAAG
AGCGTTACTCTAACGTCCATTGTCGTTATCTTTTGGGAAATATTTCGAGA
ATGGGAACTTCAGACATCGTCTCTCTTCTGAATAAATTACAAAACGTCCT
ACCAGAGCATCTGTATGACATGCACTCAAATGATATCAACCTTTGGACAC
GGAATTCAAAGGAAGTAATTGGGTTCGAGCCTGTCAATGTTTCAAGAGAC
GGTGACAGTTTCTACCGAACCATTTCAATGCTTTATTATGGTGAAGAAAA
TTCATTTGATTTAATAAAACTTGGAATTATCGCTTTCGGAATTGTCAACG
CAGAGCAATTATCTTCGATTCTGAATATTTGTTCACAAGATTTGAGAGAT
TCGTTGTTTAATAAAGCGGCTTCGTCCGACGGAGATCAAGGTTCTTTTGA
ATACTACAGCGCCTCTGGTTTTACTCAGCGCCCAATAGATCTGAGAGCTC
ACGAAAAGTGGAAAGAAAATACCTCggaaactttcatttttaaaagcCCT
GATCAATCGAAGAAAGCTCTTTCTATTTTGAAATCAGGTGTTTACCAGGC
ATCGAAGGTTGCGAAATATTATACACCACTCCAACCAAGAAGAGTATGCC
CGGTGACTTGTGCTGCCATGGACTTTTGTGTTGCTCCAACAGAAGAGTCA
TTGAACTTCAAGTGTCAACTCTGTGGGTTCTCTTTCCACAAAATGTGCGT
GTTCCCCTCTGACCATCGGAATGAATCATGTGGCTGCCACCGGATTCCAA
TAATGAATGACAAAAATAGTTTATCCTGGATTCCGACGGATCTTCCGAAa
tggtttgaaaaatatttacatcaAATCAAGAACAATATAGTTGTTCGTTC
GGCAGGAACAGAATCGCCATCGTTTGGTGCAGTTCATTATATTAAAGACA
GTGAAAAGGTTGATGCATTGATGGTGCAGCTTAATCATGCTTTTCCTGGT
TTTTGTGACGAAGTTATTCGCAAAAAAATCTTACCTGAGGCCATTATCTA
CGTATCGTCGCGAAAAGAAAGCTGTTCAAGGCTGTGTATCAGGCGCCTAC
TTAAATATAACGTCACGTAGCAATATGTATATTCAATTATTGTAGATTTA
TGCAATGTAcatttggtcaaaataaaatatattcacATTAATGTATTCAC
AATAACTACTCTTA
Run BLAST on NCBI

transcript from alignment at sc0002647:8359..17535-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040976 ID=TCONS_00040976|Name=TCONS_00040976|organism=Clytia hemisphaerica|type=transcript|length=9177bp|location=Sequence derived from alignment at sc0002647:8359..17535- (Clytia hemisphaerica)
NNGACTTCAGTCCTCCTGGTTCAACAGACATTGTTGTTCCTTCTGGTTCT
TCTACCTTGACAGACATCTTTGCTCCTGGTTTATCTAGCTCGACAAACGT
ATTTGTTCCTCCTGGTTCTTCTAGCTCAACAAACGTCTTTGGTCCTCCTG
GTAGCAGGCACAAAAGAAAAGAACTTTGTATTGCCACAGGTGTTTATGGT
ATGCCTTGTGAATTATTTCTATTTGTTCAAATAAATCATAAAATGACTTT
TGGTTAATAATTTGAATAGTTTGAAGAGGTGTGTAAAATTAGAAAGTTTA
TATAATGGATTTTAGAGATCAAACAAACAACAAATTCCTTAATACTTTAA
TTTTACATGGCTAAACTTATCATTTTAAAATCATCTTTAGAGATCGAGAA
GAAAGAGCTCCAACCCCATGACGTTGTTTCGGTCTACGGCAACCCTGAAG
ACCAGGATGGCATCCAAAAGTTTTGGCTCTTTAGGGTTTTATCAACGACC
CCGAGAAAGATCCAGGGACATTACCTAATTAAAGAAAACTGCCCTGAATT
CAGAAGAGAATATATGCTTGGCACGACCTGGGAGAAAATCCCTTTTAAAT
CTGTCATAAAAGGAAACAAACAAGCACGGCTATACATAATTAAGATGGAG
CAAGATGACCAAAATAATTTCTTCCTCCAAGCAGCAACGCACGATTTTTT
ATTTAGGAGTTGCCCTCTCTAGAATTTTCATTCAAGCTGACAGTAAAATT
AGAGAATTAAACAGAAAATTTACAGCTATTACAGGGGGTTCATGCAGTTG
TATGAGACCATGACACTTACTACTGTGGTGGTCTAAATTTTCACAATTTA
AATAGCAGTTACTACAGATACGTAGTAACTGCAAATATATTGTAGTGTTG
TAGTAACTGCCAAAAAATTTTTGATATATAATTTATTAATTATTAATTTC
AAATTATCATTGAATTTTTTTTGGAATTTTCTTCAATTTTCAGACAAGAT
TTTAAAATTTTCATACCCCTTGTCCACTCAATCAATTTTTCTACAAGAAC
TGATTGAATGAAACTTTGATATGGAAAAAAAGTACCAAATGGGTCAGAAT
TTCAAAAATTACTAAAATTTTGAACCATTAGTTCTGTAATTTTGGGTAAA
AAAGCTAGCAAAGGGTGGTGTATGCAAAATTTTAACTGAAAAGCAGTTAC
TACAGATCGTAGTAACTGCAAAGGGGTGGTGGTATGAAATTGTTGGCTTC
AAAAAGACACTTACACATTTATATAAGGAACAAGTTCATAAGGAACTCAA
GGCTGAAAAAGGTCCAAAAAGTAAGGAATTGTTAAGGAACTGCTCAGGCC
GAGGATAAGAAAACAATTTTTAATGAACAGTAAGATTTTTCACTTGAACT
AGCAATTATCTTGTGTTCTCCAAGTCTTTCGTTGAAATAGTCGATGTTAC
CACCAATTTTCATAGTTTCCTTTGAACTATTAGCTTTGTAAATAAGGAAC
TCGATAAGGAACTTTGAGGCTGAAATTATTTATAAAAATAAGGAACTCAG
AGGCTCAGATCAAAGTTAAGGTTATTACTAATCATGTCTTGTAGTACTGC
ATGACCCTCTTGGCTATTATCACGTTTCAAGCAAATTTGTTTTCAAATAT
GAGTAGAAAATGTCTTCTGTGTAATGTATAATTTTTTCTGTAATTTTTCA
AAGGGATACATATCCGGAACGACTATTGCATGTGAAATAACCTATAAATT
CAGTCCTGTTCAGTCCTTCCGTAGAAGTTTTAAAAGGGCACAGAAGGGCA
TGACTAAGATCCAGATTATGTTATTACGTTTATTTTTATTTAGGTTATGT
ATTTAGGAGCAACTTAAATTAGATATGAAAAACGGTCTAATAGAATATTA
TTTTATGGTATTTTTCCTGTCACTTCGAATTAACCACAGATGAGTATTGG
GTTGATCAGAAACAAAGAATAATTGCATAATTTTTTGAATATCTTATGTA
ATTGCTAGGAGGTGGTAAAATAACTTTATAGTAGAGGGTAGTGCCTTTCT
TGTGAACCTAAGGGTGTTATCACTCTTGGCAAGCAAATTGTGGGGGACGG
TCTAATAGCAAATTGTAGTCAACATTTTTGAAAAATATCATAAACAGGGT
GGGCTTTATATAAGGTTTTATATAAAATTTATTAATCAGTGGACGGAAAT
AAGACGTAGTTTGAAGAGTGGTTTTTATTTTTGAAAGATGAATAAAATCT
ATCTCAATTTGCACATTGAGTTGTTTATCAATAAGTCTGTTACTAATGTT
TTGCTGTGTTTCCAAGTGACTTCCGCAAACTCTATCTTGAAATTGATTTA
TAATCTCATTCTTTATTGCCAATAGGGAAGGGATACTTTTAGCCAGGGAA
TGGTATTTTCAGTCAAATTTGTAAACGTGGAGGGATGTTAATAAATAGAA
ATAGATACATATTGAAATTGAAATTTTATTTCAAATAGTATAAGCATTTC
GGCTACGCCATAGTCAGTACAAACATCGAATGGTAAAATCACAAATTTCT
ATCTAAAATGTTGAAAAAATCTAAGTTTAAAGTCTAATTATCTACAAATA
AAAATTTCATTTATAAAAGCGCCATACAAACGAATCGATAAAAACGTAAA
TGCTAATAAAATTATTCTTTAGGGTATATTCAAGTAATGCCATTTCTGAA
AAGATTGAATTGTTTTATCTCTAGCTGATTGTTAAGTGAAGGTCCCATGA
TAGCTATAAATGAAGCTTCTAGAAATTTCCTTTTTTGTCGAATACTGGAG
CTTTTAAAATACATCTCCAATGAAAATGATGGGTGTATTTTTCTTTCAGA
TGATTAGCAGGCTCAGAGTTATGCTTGACGTTTTCGGATACATATTGCAT
GAATGTTGAAATGGGCTCTTCCAGAAAAAAACTCATAGGAAGATAGATTG
TCAAGGGGTATTGAAAAAACCCTGAAAAACTGCCATGTCCATGGTGTGAA
TTTGTAATGTCCAGGGGCAAACTTTTGTGTCCAGGGAGTCAATTTGATGC
ATGTTGAGGGGTAAAACACGTGTCCAGAGGGTGAAAAATAGAAATGTCCA
GGGGTACATCACTGAAAAAATAATAAATCCTCCATCCCCCCATGAACGGT
TAACACTTTAACTTCAACTAGATCCTATATGAAATATGAAACTATACGAA
TTCTCTTCTCCTTAGGTAACTATCGAAAAAGACAAGGCAGCCAAGGTGCA
AATTGGAAAAAAAAAGTTAGTTTTTATATTATCTGCGACTTTATAAGAAA
TGATTAGGAGAAAATTGATTCAGATTAATCACTCTCATCTTAAAAACATC
AAGTATAATAGAAAACAAATCCCGAAAAAAGTGCATCTTTGAGAAACTCA
AAATTTAAGTTACCAAAAAGAATAACACATTGATGTAAAATATAGTCTTA
TCGTGATAATTTCAATGATGATATATACCCATCGCTACCCTTTATTAGTG
AATGATACTGAATAGATTAAACACGGTAGTGAATTTAATAAGAATCTTTC
CTGTTCTTCGCTACTCTTTCTTGTGTATTTCTTTTCTACATTTCGTTGTG
AGACGGTGATCCCTGGTTTTTCATTCCAGGTTACTTACATTGAGAACGAA
ATTGAACGAAAAAGAAGAAGCGAAGATTTGTTCAGCCAGATAATATCAAA
GGTTTTGTTGTACATTATAGTCATTTTTTCAATAAGCACTTATCTTCTAC
ATTTTTATATGAAACATTTGCCAGCCATGACCATTAGACGGTACGGCGTC
GTTAGATACCCGGTAATTAAGATTATGCTATAGATTTCATAATATTAAAA
TTGTTTTGAAATTTAGATGGAATACTGGTTCACGCTATGTAAAGCTCCGG
CTTCCATCCTGGCTTTCTTTGACAATGATCTTCACTATTACGGTTAGATT
TACTTCCTGATTCAACATAATTTACATAATTCGATTACTTCGATTCAATT
ACCTTTGCTCCCCAATTTTACGTTCTCTTTGCAAGAAGCACTTGTCTAAG
TCAAATCGATCCGAGCCTCGTAGCAGCCTCGTATTTTTGGACGAGTTATA
AATTTTATCACTTCATTCTTATTTATCAGGTACTTCCAACAAAATGAAAG
ACTTCTGTGATGATCCAATTGTCAAGAAACGATTCGCTTTTCACATGCGT
CACGAAGTCGAAGATGTTGACAATGATAAAGTCAAGCAATACCCTAAAGG
TTATTTTTACTTTGCTGTTCAAAATTTGAATGATCTCAAAATTTCAAAAA
ATGTTTTCAAATAAATCGTTTTTCCTCTACTAAACGTCATCGTCTCATGA
GGCTATACTTTCAATATCAGCCCTTATTTGAAAATAAAGATTGGAAAATA
GAGGACGATATGCAATCGTCCAATCTGACAGTACTTAGCTAGTTTAAACT
TATAATCATGAAGATATTTTTTATTTTTTTAAAAGATAAAAACATCATTT
AGAGCGCTTACAAAAGAGCCTAAATTGTCTTGAGATTTGATAGAAGATGG
TAATTTGTTCCAGGTTGAAACAGCTCTAAAATTGAATGTGTTTACTCCAA
AGGCACTGTTGTATTTTTTATAGAAAGGGAGACAAGGTGTGACCAGAACG
AAGATTATACTTTGATTGTAATGTGACAAATATACAATACATACAAATAT
ACAAAAATAATAAATTCAATGATAAATTTGTACACATTAGGCACATTGGT
CAATCTCTATGGTTGGAAGAAAAAAGGTTCAAAGGAGAAACAGAAAATTG
TTAGATCCTTAGTCAAACCTGGTAAGTTTAAAGGCTTAGGCTACCTGTGA
TTTGCTTTCTTTTATTTAACCTTTGCTTTTTTTATTGATACATACCTGAA
AGAAAGAAATTTTAGCTCACCAGTCATTCCGTCAGCTTCAATGCAATTTT
TCGAAATTAATTTCGGAGCGTAAGGAAACTTTTTTTTTCGAGTTTCTTGT
TTGAGTGCTTTTGCCAAAATTCACCTCTCGAACTCTTGAAACTCTCTAAT
TGGTCAATCGTTTAAATTTTGCGTTTTTCCTTTTTCCATCACTTAAATTA
TATTTTTTTACAGTTGAGTCAAAAGGTTGCATTAACTGGAAAACTTGTCC
GTTGTTATCTTGGTGGCCCAGCGATGTTCCGTTCAAAAACCCAACTGGAA
CTCCCAAGATGACAGTTGTTGAGTGTGACAAAGTGATCACCAGTTTTGTT
TACGGAGAACTTGTTCACTTGCCCGAAGATTTGATTTTGGAATCGGAAGA
GGTGAACTGGATTTTACTTGAGTGAGGTTTGACAGAGTGAATTATCATTC
GTTGATGCAGTTTTGTATTGGCCTCCGGGGCTAAAACTAATATTATGATT
TCAATTCCATTTTTAGCGTTACTCTAACGTCCATTGTCGTTATCTTTTGG
GAAATATTTCGAGAATGGGAACTTCAGACATCGTCTCTCTTCTGAATAAA
TTACAAAACGTCCTACCAGAGCATCTGTATGACATGCACTCAAATGATAT
CAACCTTTGGTAAGATTCTCAAGATTTCTATTTCGAATGCACTGTTTTTT
CTCTAGACGGCTGACTTTGACTTTTTCTGTGAAAACACAGATGAATGTGA
CATTGGAGTTAAACTAATGTGTTAGTATATTTTTGTGTTTCATTCCTTTC
ACTTTGCTGGCGAAGTTATCAAAATATATCAAAAATTTGCTGCAGTTACC
ACTACTAATTTTACTTTTACGTTTTCTGTCATGTTTTTATTCAGGACACG
GAATTCAAAGGAAGTAATTGGGTTCGAGCCTGTCAATGTTTCAAGAGACG
GTGACAGTTTCTACCGAACCATTTCAATGCTTTATTATGGTGAAGAAAAT
TCATTTGATTTAATAAAACTTGGAATTATCGCTTTCGGAATTGTCAACGC
AGAGCAATTATCTTCGATTGTAAGTCTTTTCAGGGGCCTAGTCTTATTAC
ATAATTTGAGATTTTATGAACATAAATACACAGTTACTTACTCTCGGGTA
CCTTATAAACGGGGGTGTGGAATAAGTGGGGTGGGTGTAAACAATCTCAA
AATTAAATAAGCAGGGGGTGATGTCCTGGGTGGAAAGGTTTTGAAAAGGA
GGCTAATCCAGATGAATAAGGGCAATATAAAGAGGAACTTTCAAAATATT
TTCCCAAAAATTAATAAACGAGGGGGTTGGAATAAGAATGTCCTGAGTGG
AAAATTTTCGAAAAATTAATTAGCGGGAGGACGCTTATTAGTCACCCGAG
AGTACACAATACAACTTACAACGGATATTTATTTCCTTGAAAACATTTGA
ATACAATACAAAATAACTATATAAAATAAATTTTCTTATTACTATTGAAT
GAATCCCTTAACTGCAACGTAGTGCAGTTCACTATAGTTCTCAACCTGTG
GTATCTTTTAATTTAGCTGAATATTTGTTCACAAGATTTGAGAGATTCGT
TGTTTAATAAAGCGGCTTCGTCCGACGGAGATCAAGGTATACATTATAAA
TTTAATCTGCCGATATATTATGATACTTAATCTAAACCTAATTTAGGAAA
TATAAACTTAGGAAATTTAGGCTGAAGGAAAAAAGTAATCCTGATATAAT
AAATTTTTGTGATTTGCGTGTACAGTTTAAGTTTAATGGGACAAAACTTA
GGTAAATCAAGCAAACCTTTGAGAAATCAGCCAAACTCTTTTACTTTCCG
GGGTACTACATCCCTTTTTAATATTTGTCGCTTGTGTTGCGATAGTATAT
CATAATTTCTCTCTTTAGGTTCTTTTGAATACTACAGCGCCTCTGGTTTT
ACTCAGCGCCCAATAGATCTGAGAGCTCACGAAAAGTGGAAAGAAAATAC
CTCGGAAACTTTCATTTTTAAAAGCCCTGATCAATCGAAGAAAGCTCTTT
CTATTTTGAAATCAGGTGAATTTTATAATTAATACTTACAATCATATTTT
AGAAGCGGAATCCATCCCATTGTTTTTGTAGCAGGATTATTGTCATGTTG
AAAGATTTGAAAGTCATTAGCATAGCTAAATGCACCCTCTCAGGAAGTCC
TCGATTAAAATAGATTTTACAGTTATTTTACGTATCGTTAAACCAGCAGA
TGATATTTTCTCTTTGCAATTTCAAAACCAGGGAAAGGACTGGTGACCTC
CCCAACCTTAGGGTAGACATCTACAGGAAAATGGAGCTTTAGGGTCGCCC
TCGACTGCGGTCGCAAAATTTACTAAAAACAAAGTGTAATTACTTTCACA
TTATTTTGCAGGTGTTTACCAGGCATCGAAGGTTGCGAAATATTATACAC
CACTCCAACCAAGAAGAGTATGCCCGGTGACTTGTGCTGCCATGGACTTT
TGTGTTGCTCCAACAGAAGAGTCATTGAACTTCAAGTGTCAACTCTGTGG
GTTCTCTTTCCACAAAATGTGCGTGTTCCCCTCTGACCATCGGAATGAAT
CATGTGGCTGCCACCGGATTCCAATAATGAATGACAAAAATAGGTAACAT
CTATTAGCATGGTCATGGAGGCCGTAAACTTTTTTGTTTTGACGATTTAA
TTTATGACCTTGTCTACCTACATTCTTTGCATACAAAATTTGGGATACAA
CACATTGGGAATTTTCAAGCTCTATTTAGATTTAAAATTATAGATTTAGC
TGGCCTTGTTGCCACTCAATCTAGGTAGTAATTTTTAGACATTGGTTATG
ACCTTTTTAACTTTTTTTTTTGGACTTATCAGTTATCAAAAGTAAAATTT
ATGGCTTAGAATATTTTTCTTTTTTCACAGTTTATCCTGGATTCCGACGG
ATCTTCCGAAATGGTTTGAAAAATATTTACATCAAATCAAGAACAATATA
GTTGTATGTACAAATTTAAGTTGATAATCCAAGGCGACAGATAGCTTGCC
TTTCATGGTTTTTTATCGAAACAGTGTTAATTCTTTTCTTTTTGAGTTTT
TATTTTGTGCTTATAGCACTTTTTTGGAATTTGATATAAGCATTGCTGGC
TCAGAATTGGAGATGAATGTTTTGCGAAATACGTCGCTTGACAAAAAATT
GCGATGCACTAATATACCATTATCCCTTATTCAGGTTCGTTCGGCAGGAA
CAGAATCGCCATCGTTTGGTGCAGTTCATTATATTAAAGACAGTGAAAAG
GTAAGGAATTATTACTTTAAAAGACATTCCCCGATCTCAGTCTTGCCGTA
GCCAAAAGTAGGTTGGTCTTTTTCTTGTCTGTCTAATTACAAAAACTAAA
CACTCTCGTTCAGCAATAGTTTTGAAGACGGATTTAATGAGAAAATTCCA
ATGTTTCTTTTAGGTTGATGCATTGATGGTGCAGCTTAATCATGCTTTTC
CTGGTTTTTGTGACGAAGTTATTCGCAAAAAAATCTTACCTGAGGTTAGC
TTTTCTTCTTTCCCTCCCAGCGATGAACCTTTAAACGAATCAATTTTCGT
GGTAACTAATTTTCGCTGACATATCTTTCGCGTTTTTGCGTGTCTACCGC
AAAAATTAGGTCGGTAAAATACAATTTTTATTTTCAAATCAACATACAAC
CCCTACAAAGAAAGAATATAGGTGAAAAATGGGTGTAAACCGCGACTATT
TTTTCCACGAAAAGTGATAATACACAAATTTTCTATTAGCAGATTCATGT
AAAAAAGATATGTTTATGTGTGCAATTTTCAGCCAATCAGAGCTTTACAT
GACGTTTTTGGTGACTTTTTTACCAGTATCTGCTAATATGAAATTCGTGT
ATTCTATACCGTGAAAATTGGTTTCGTGAAAATTAGTCAACTCATTGTAT
CCTTTTGTGTTGATTTATATGTCTTTTGATTATGGAAACTGTCTACTGGG
ATGTTTGGGATTGATGTCTACCGTATGATTACGATTTCCTTAGCACTAGT
TTCGTTTGAACTTCTTATACACTTCATAATTATGATAATATCTTCATTTC
AGGCCATTATCTACGTATCGTCGCGAAAAGAAAGCTGTTCAAGGCTGTGT
ATCAGGCGCCTACTTAAATATAACGTCACGTAGCAATATGTATATTCAAT
TATTGTAGATTTATGCAATGTACATTTGGTCAAAATAAAATATATTCACA
TTAATGTATTCACAATAACTACTCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025017XLOC_025017Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040976-exon-sc0002647-1575043694:17338..17535TCONS_00040976-exon-sc0002647-1575043694:17338..17535Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:14271..17145TCONS_00040976-exon-sc0002647-1575043694:14271..17145Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:13835..13906TCONS_00040976-exon-sc0002647-1575043694:13835..13906Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:13594..13669TCONS_00040976-exon-sc0002647-1575043694:13594..13669Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:13287..13406TCONS_00040976-exon-sc0002647-1575043694:13287..13406Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:12235..12795TCONS_00040976-exon-sc0002647-1575043694:12235..12795Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:11977..12119TCONS_00040976-exon-sc0002647-1575043694:11977..12119Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:11567..11741TCONS_00040976-exon-sc0002647-1575043694:11567..11741Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:11000..11069TCONS_00040976-exon-sc0002647-1575043694:11000..11069Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:10571..10717TCONS_00040976-exon-sc0002647-1575043694:10571..10717Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:9993..10224TCONS_00040976-exon-sc0002647-1575043694:9993..10224Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:9633..9705TCONS_00040976-exon-sc0002647-1575043694:9633..9705Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:9336..9401TCONS_00040976-exon-sc0002647-1575043694:9336..9401Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:9092..9172TCONS_00040976-exon-sc0002647-1575043694:9092..9172Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1575043694:8359..8533TCONS_00040976-exon-sc0002647-1575043694:8359..8533Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:17338..17535TCONS_00040976-exon-sc0002647-1510915933:17338..17535Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:14271..17145TCONS_00040976-exon-sc0002647-1510915933:14271..17145Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:13835..13906TCONS_00040976-exon-sc0002647-1510915933:13835..13906Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:13594..13669TCONS_00040976-exon-sc0002647-1510915933:13594..13669Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:13287..13406TCONS_00040976-exon-sc0002647-1510915933:13287..13406Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:12235..12795TCONS_00040976-exon-sc0002647-1510915933:12235..12795Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:11977..12119TCONS_00040976-exon-sc0002647-1510915933:11977..12119Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:11567..11741TCONS_00040976-exon-sc0002647-1510915933:11567..11741Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:11000..11069TCONS_00040976-exon-sc0002647-1510915933:11000..11069Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:10571..10717TCONS_00040976-exon-sc0002647-1510915933:10571..10717Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:9993..10224TCONS_00040976-exon-sc0002647-1510915933:9993..10224Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:9633..9705TCONS_00040976-exon-sc0002647-1510915933:9633..9705Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:9336..9401TCONS_00040976-exon-sc0002647-1510915933:9336..9401Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:9092..9172TCONS_00040976-exon-sc0002647-1510915933:9092..9172Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1510915933:8359..8533TCONS_00040976-exon-sc0002647-1510915933:8359..8533Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:17338..17535TCONS_00040976-exon-sc0002647-1491911889:17338..17535Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:14271..17145TCONS_00040976-exon-sc0002647-1491911889:14271..17145Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:13835..13906TCONS_00040976-exon-sc0002647-1491911889:13835..13906Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:13594..13669TCONS_00040976-exon-sc0002647-1491911889:13594..13669Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:13287..13406TCONS_00040976-exon-sc0002647-1491911889:13287..13406Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:12235..12795TCONS_00040976-exon-sc0002647-1491911889:12235..12795Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:11977..12119TCONS_00040976-exon-sc0002647-1491911889:11977..12119Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:11567..11741TCONS_00040976-exon-sc0002647-1491911889:11567..11741Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:11000..11069TCONS_00040976-exon-sc0002647-1491911889:11000..11069Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:10571..10717TCONS_00040976-exon-sc0002647-1491911889:10571..10717Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:9993..10224TCONS_00040976-exon-sc0002647-1491911889:9993..10224Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:9633..9705TCONS_00040976-exon-sc0002647-1491911889:9633..9705Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:9336..9401TCONS_00040976-exon-sc0002647-1491911889:9336..9401Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:9092..9172TCONS_00040976-exon-sc0002647-1491911889:9092..9172Clytia hemisphaericaexon
TCONS_00040976-exon-sc0002647-1491911889:8359..8533TCONS_00040976-exon-sc0002647-1491911889:8359..8533Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002647supercontigsc0002647:8359..17535 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.17292	2.81154	1.16185	0.344472	1.02527	0.206124	0.728429	0.771078	0.466588	2.35817	1.84846	2.07341	0.374669	1.04778	0.310299	0.559791	0.549574	0.231929	1.01817	0.694955	1.71661	1.5004	0.564152	0.387655	0.203205	0	0.648044	1.98126	1.87923	1.76085
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040976 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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