TCONS_00040951 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040951
Unique NameTCONS_00040951
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2455

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040951 ID=TCONS_00040951|Name=TCONS_00040951|organism=Clytia hemisphaerica|type=transcript|length=2455bp
ACCGAGAAatTCAGGGAAGATAAATAAtacaaaacatttcaaatgaATGG
GCAAAACACTAACAACCACACTCACCACCAACAAGGACAGCCCAGTAACA
GTCAAGTTCCCACCTCCTCTGAAACTGATCCCATCCTGATCGAAGGTGCA
AGTGCAAACCCTTCATCATCTTCTCATACTGGTTTATCTTCTGACGATGA
AGTGCCCGTGGGTACATCTCGTGAAGAGCGCTTGGTGAAAAAATTGAAGG
TCATTGATGTCCTTTCGCCTAAATCAAGTATTGACATTGCAGATAATGAG
GTTGATAATATCATTCGCCCAACGTTCACTAGAATGAATGTTaaccagca
acaacaacaacaattacaacaagtatcacaaccacaacaacaacaaatgc
AACAGCAACATTATCAACAGCATCTTCCAAATGAAACTCATCTACCAAGC
ATTCAAAAACAACGTGTAGATCAGTTCAAACAAAACCACTCACCAAAGTC
CATTTCCTTTGGAGGCACAATACCAAGGAACCGTGAGCCGAGAACTTTAC
CATCAAGAATAACATTGCTTGTCAATGGAACACGTTTTGTGGTGAACCCA
TGTATTTTCACCAAATACCCGAACACTCTCCTCGGCAGGATGTTCAATTC
ATCGAGTGATTACGTCACCACCAACGAACATGGTGAATATGAAGTAGCTC
AAGGAATCACCGCTAATGTCTTCAAATCAATTCTAGACTATTACAAAACT
GGTACCATAAATTGTCCTTCATCCATCAGTTGTTCAGAGTTGAGGGAAGC
TTGTGATTACCTTCTTGTTCCTTTCAATTCACAAATTGTCAAAGCTCAAA
ATCTTTGTGAACTACTGCACGAACTATCAAACGACGGTGCAAGAGAAGTG
TTCATGTCGTCGTTCGTTGAGAATGTTATCTTACCTAAAATGTTGCGTTG
TGCGGAGAAAGGAAATCGTGAATGTCATTTGGTGATATTGAAAGATGATG
ATGTAGTGGAATGGGGCGAGTTTCCGCCTGCCAATGGTGAAGAATACGCA
GAAATCGTCAACAACACTGCCTTATACCGCTTCTTCAAATATTTCGAAAA
CCGTGACGTTGCGAAAGATGTTTTGATTGAACGTGGCTTGAAGAAAGTGA
AGCTTGGCATCGAAGGTTATCCAACACACATGGAGAAAGTCAAATATAAA
CAGCATGGAAAACCTGAAGTGATATACAGTTACATCCAAAGACCTTTCGT
GCACATGTCTTGGGAGAAAGAAGGTAGTAAGAGCCGTCATGTAGATTTTC
AATGTGTAAAGCCGAAAACAGGCATAAGTGGTGCTGTAGATGAACCGGCT
GCTCTTGCCAATGACATGGATTTACCTCTTCCCGGTGAACTGCTATCTGG
TGATGGATTCATCTCCAATGAGTTGCATGATAACAACGAGTAGACTGTTA
CGGTGTTCAAAAAAGGTTTAGATGACCAAGTGTCTTCACCATCCACGGAT
TGGACCAGTCCTTTTAATTTGATGGTAATCCATGACAGCTTGTCGGTTGT
ACATGCCTGATGATGCGTTGATATTTGACTCTTATTGTTTTCAGACTTTG
TTCACGACTGTTACTGTCGGTAGACACTGTTTATGAGCAACCTTTGTTAC
CTGATAACAGGGATCAGTTTTAAAACGAGGAAATCCACTCCTCCAATTTG
CCAATAGTTTCTATAAGATTCAGGGGTCAAGTTTGTCAGGAAGCGTTTAA
AATAAACAACTTCAGTGCTTTTTTGCATACATACAGGACACTCttcacaa
aaagacaaaattagTTCATTTGTGACAATGTGGTTTAATAATTTAAGAAA
TTTCTGCTATAGTTGGCAAGATTAAGTCTCGATTTCCATCAAAGTTACAG
AAAAGCTGTAGCGTGCTACGTGAAGAGAGCCTTCTCCAATCAATTACAAT
GACGGTCATAATACTTGAGAAAAAGTAGGGGAATTCCTGCAAAATTCTGA
AAACCACGAATGATATTTAAGTGCTCTAACTTACTTCTGAATGTAGAATT
TTAACTCCGAATTTTACCATTAGGTTTTAAGAGGACCTTAGGATCCCAGG
ATTCAAATGCTCAAAAATCTACCAATAAGAttgagaatatagcctgaaag
CCACTGAAGCTCTCTATAAAATCCAATGTCCAATGAAATAATGTAGAAAT
GTTGAAAATACCATTCTCGCCCGAGTTTTATAATCTAAAAAACGGTAAAA
TACCCGAAAAGCTCAATAAATGTTCATGATATTGATAAAAGTTGGAAGTA
AGTTGAACTTTCCTAGaaggattatttttttcagaaagtacTGGAAGTCT
AGATATTTTATTTGTTTACGTAATCTATTTGTCAACTTGtaatttattgt
tttgtttattgttttgtacattttttaacaaattataaTACACACGATGA
TGTAG
Run BLAST on NCBI

transcript from alignment at sc0002640:8072..18129+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040951 ID=TCONS_00040951|Name=TCONS_00040951|organism=Clytia hemisphaerica|type=transcript|length=10058bp|location=Sequence derived from alignment at sc0002640:8072..18129+ (Clytia hemisphaerica)
ACCGAGAAATTCCAGTAAAGTTTGATTACTTCGACTGATTCGATGTGCTT
TTGTTCACAAATCATTCTTGCAGCGCATGAACAACTCTTTTCTGTNGCAG
CCAACAACGAGGAAGATGATTGATTaatccaggggatgtcaatcgaaaat
caaaatcaattgaactTAATCGAgcgataggtgttcgattgggtCACAAG
TGTTACgtgtaagccaaatcgcgtattacgaacaacctctaaattgccga
gtaggtaccggttgaaacacttgtgagAGGTCAGACACAATTTATTGTTT
GGTTAGTGTCCTAGAAGCTCTAAAAAATGGGTCGGTCAGTAGCTAAAATT
GGataacctttttttatttttcccaccaaaaacctcaatttttgaaatca
tccATTCTTCGAGCAATTGCACAATCCTGGATTCCAACACAATGGTATAA
GCTGCCTTATTTTATATTTCGTTTCTGTGCGCGAAGTGGATGTGGACATG
AAAAGGAGGAAAGAAGGATTTGATTTTTCTGACTCaaaatgaagcatttt
ttctcaaatacttAGAGTCGGTCTGAGGACACAAatatcaattgggcctg
gccttaCCAAACCGAATCAAACAGTCATTAAACCGAGAAATTCCAGTAAA
GTTTGATTACTTCGACTGATTCGATGTGCTTTTGTTCACAAATCATTCTT
GCAGCGCATGAACAACTCTTTTCTGTTAATCCAATGATTCTTGGGGATCG
TTTAGGCTAGAGCTGTTGCGCTAACAATAACAggaaccatttgagctaca
aaaacacTGACGGTCTAatcttaaactcctatatcggGATTAGAAACTAG
GGCTAGTCTTATTTCTTTTATCTTCTCCTTTGtatcaatacaatgctgac
aagttgaccagagttgacacaacacattgacaagtaatccctgagaaaAG
TTTATATATTAAaattctgcaacaaaaacgaaaatggtctcttctactga
ttgctttaTCAACACTCCTTACAGCTATTTATCAAATTTctaccaatgag
gttgccgtaTTTCAAACGCCCCTTCCTTTTGGCACTCATGGcttttcagt
gccttgcacggctggcggctgtaaaatccccccttcatatatttgtttca
atctgtgattCTAAGGCCTTGGGATTTTCTCATCCTTCAATtttctgaag
aaagcgggaatccaatgcaagagttagattgtcaacaaagtgccataaaa
aatcattgaataaaagaagaaatttaaatcttagatattttcattttgaa
gaattggtgccagaatgaaacatggaaaagttttattttttattggttca
atcgaaataagggaatttagaaaattttctttgtttgttttttttgtaga
aacccctgtaactatgggcaagtACCCCATTGCTAAGATGTtagcttgaa
atcgaaagtgaaaccactgaaaatgaaagtaaaattggtccgcactccaa
atcccgtaatcttgaaaTTTGATGGTTCAATTAAGAAAATTGGTTCAATA
GGATTCGGTTGACTTTGCCTGGATTTAtgataaaaaagtcatttaattta
ACATAACTGCGAGATTTAATAGCCCCTCGTCAAGTAAGGCATTGTAATAC
CACAGGCGTCAAAAAGAAGGGCAGTGTGAAATGCGACAATCTTATTGGTG
GAAATTAAATATAAACAGTCTGCGAAGGAGCACTACAAAGCAATCAGTTG
AAGAGACTACTTTCGTGGAAGAGAAGATTATATCTATCTCATCtaaaatt
tgagtaatttggTTAGGAACATTGATCTAAGCTTATAAAAAGTGATTCTT
ATGGATAAAGATTCAATTTTTgagacaaaaaaatctttttttgaaaattc
agtcaTCCTTTACCAATTATGGTATATATCTGCTTTCATgcaaaattcaa
ttcaaagaaaaattaatgattcaGTATTCAACAAAGTCAAAGTCATTGGT
AGAgtgcttttaaaaaaatatcaaatttgtcccatttttctataaaaaca
cctCAAGAAACCAAGATTTTGTGATTATAAATAGAAGAAGTATAGAAGAA
GAAGGATTTAATATAAAAGAATCGTATCATCTAATCTTATTGTTATTACT
ATGATAagttattttttggacctaccttggaggttctttaaattaaccca
tgactttttgtgaaattgcttcatttgtttttcagattttttgtgtAAAG
ATGCTCTGAAAAGTGGCTGAAGCTGTTTTTTCCGGATATTTTCTTTGACC
GACaaaattggattttcttatttgggaccattcaaaaagtatgtacgctc
gaaatggcaaatttttgactccccctcccccttttACGCTTTCGTACGCT
TTATGGTGTACCCCCTTCAGCGTATgtacgctttttagtacacccccccc
ctaaccaaagtcgaaacttgaaactcttgtaacagtagaatatgtaggta
tccaatcgtatttataacaaagtttcaagaaattaaaagaatctataaaa
ataccaaaggagaaatgaaaaataacaatcgcaaaaacaattttttgatg
tgaaaatattgccgttttctctcaaaaaagacagtttaggaaaaGTTACG
AGCCTACGTACTTCTCCTCGAGGACCCCCTTCCCCTCGTACGCTTTTAGG
AGTACCCCCCTCCTCCCTCTcaagcgtacgtactttttgaatggtccctt
tGGGGAGATTCCTTTTTTTGTCATTAATAAGGGAAATGAGCATTTCATAT
CCTTACAGGGGATGGTTAATGGAATCAGCCCAATTGGCTTGGGCTGCTTG
Ggctattttctgattttttagtttatagtagggggaaattttttaaaatc
acccgatttttttagtcaaagcacttgttatacatttttggaaagtacaA
CTATAGAGGAGTCCGAATTTCAATGTTTCCAATtatttttcggacacttt
ggtgtgattttcggacaaatatgacggtctcaggcaaaaatcatagggtt
aaaaattaatgaaaattttagctcgagaaaacNtaaaaattaatgaaaat
tttagcttgagaaaacggagacctgttgtatatttttggaaatttctcaa
aaaattaggattagagatatactagccgtcacccggcgtcgcacccgccg
agtagagtgttgttgaacacatcaaaagccctttggatggtggggaggGT
AAAAAGATCTGGTTGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatgaggggtcaacga
cctcccaactccttttcaaactcgagatatcgcattttgaagtttttctc
aaatctgtgacgtcattgggtccctttacccctaatgttgaaaacggtca
attcgcgaatttcggaatttttgcggtcaacgggtagcttatgccccaag
ggtcccaaaaaactaaaaaacgtcaattatttccacgggaaaNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNgctttcgttttcaaccacccatccatccatccaaccaaaatcggtc
acgtaactctcgaacccccatctcaaaaatccataatggccccccACAGC
TCAATCTATATTACTAAACGTAGAATTCGTATTGAAATCACCTATAATTG
CAATATATGTACCTAACTCGaaatattgagcttcaaaaagcgcaaaaact
ggacaaaacagctgttatctggctgaaaaacacggttttcaagggttgaT
ATCTTGAgataggtacagaaatcacctataatTGCAATATATGTCTAATC
TTAAattcatatttgtccgaaaatcacaccaaagtgttcgaaaaaaaatt
ggaaacattgaaattttgattcccctaccccttagctttccaaaaatgta
taacaagtgctttgaccaaaataatcgagcgacctcaaaaaaacaaacaa
atttcccccctactattatattttcaaactttctttgccattttttgttt
atatctttCATCAGTATTTCAGCTTATTTTGGGAATTTTCTGTTTTAAAG
AGAATGAATTGGATCGGAGGAGCAAGAAATAGATTAAAtagaagaaatga
aaaaagaaagcaGGAACAGTTTTTTGAAGATAAACGAAAAGCAAAACAGT
TGAATAATACCACTGTCACCAGCCATTTTCAAAGTAGCAGCTTACATCTG
AGCCAAGACATTCTGTCCATCAAAACTCTTTCAAATGCATACAGTGAAAA
ATCTGTGGAAAGTTGTAAACCACCAAAACATGCGAGATTTGTTGATTTAG
AGCATGGAAAGTCAAACTCTAGATTTGTAAGCCTTAAAAGTCATGATGAC
AGCTTCGAAAAGAATATCAAGCCCTCAAAACTTCCTTTAGGTGAATACGA
TGAGACATTGAGCAAGTCATGTTTTCCTAAAGAAAAAGTGGACTTTTCAA
TTTGTAAAGGAGTAAATAAAATGGTTGATTTTCTCGACGAGTCTGTTATT
GAAGAATCAAAAGCCTATGAAAAGTGTCTTTCAAGTTCTGAGGAAAGCCT
TATAGAAGAAGCTGAAAATGTTGTGCTCAAGGACACTGTTAAACTTCAAc
agaaagaaatcaagaaagtcAACAAAGAGTCAAACTTACCCACAATGACC
AAGTCACAAGCTAATGAGAAAATGAAAGAGATCAAAAGCTCAAACGCCTT
CTTCAATCTCTTTAATTGCTAGCCAATGGATAATATCTCAATGGAGAAGT
TGTGTTTTACTATTACCAGTTTCATTTGGTCTTGAATATATACATTTAGC
CTTTATAAGAACTATGAATTTAAGACTCGTTAGCCTGCTTATTGCCTTTT
TTTTTAGTTAcctttaaaaagttgaaatgttaaCATTCGAATATTGCTTT
TCTTAATAATCGATACTCTGCAGGTGTTGTTAACATTAGAATATTTGGAA
CATTTTCTAAGCAGTTTTCATTTTGGGCCACCCTTTATAGAATTGATCCA
TTCTGCTAGCCGAACCGACTATTTTTTTACAGGGCATATTGTTTGcagtt
tataagaattttattacAAAGTTTTATAGAGAATTTGCAATTTTGATCAA
TTTACCTAATATTATAAATCATATACTGTGTGTACATTTTATGTCTTCTT
AACGTTTCTACCGTATTCtcgcctggagacttcaaaaatattttagttct
TGGGAAAATGAGTTCTCTTAAGTTACTAACATTTTAAAGTTGGAGTTACA
TGTAAAATTCCCAAAAGTATACTTGCCATTCATTTTGGTTTTCTCCATCT
CATATTCTTTCAGCTCAGATTATATGCTCTTTAAAACTAgcattgaaatc
gaaaatgtttGCTGTTATATCTTTTTGGAATTGACTGATCTTTATTAAAT
AAGGGATATATCTTTTGTGACTTCTATAAtgagttttaaagctaatttca
TTTGCTACAATCGGGcctttgaataatttgaagctactgaagttgagccc
agtgcgttgcgcacctTCGACTATTTGGTTTAAGAGTTTTTATTCTAGCA
AgacgattttttcaaaaaataatgatttgaTGATTGAACTATtcattctt
tgttgtttacatTCAGGGAAGATAAATAAtacaaaacatttcaaatgaAT
GGGCAAAACACTAACAACCACACTCACCACCAACAAGGACAGCCCAGTAA
CAGTCAAGTTCCCACCTCCTCTGAAACTGATCCCATCCTGATCGAAGGTG
CAAGTGCAAACCCTTCATCATCTTCTCATACTGGTTTATCTTCTGACGAT
GAAGTGCCCGTGGGTACATCTCGTGAAGAGCGCTTGGTGAAAAAATTGAA
GGTCATTGATGTCCTTTCGCCTAAATCAAGTATTGACATTGCAGATAATG
AGGTTGATAATATCATTCGCCCAACGTTCACTAGAATGAATGTTaaccag
caacaacaacaacaattacaacaagtatcacaaccacaacaacaacaaat
gcAACAGCAACATTATCAACAGCATCTTCCAAATGAAACTCATCTACCAA
GCATTCAAAAACAACGTGTAGATCAGTTCAAACAAAACCACTCACCAAAG
TCCATTTCCTTTGGAGGCACAATACCAAGGAACCGTGAGCCGAGAACTTT
ACCATCAAGAATAACATTGCTTGTCAATGGAACACGTTTTGTGGTGAACC
CATGTATTTTCACCAAATACCCGAACACTCTCCTCGGCAGGTACTCCATC
ATTTCAATGCTGCCAGCAGCTTCATTACAATTTTTGAATAGGTTTTCGAA
AGTAGAACCACCCAGCCTTAAGATAATTTAAATCAAACGAGCTGTTATTA
GATTAGAACATTGTATAAATTTTAATCTCTTcgaatttcttaaaatttct
ttcctttcgCTACTCTTTTTAGGATGTTCAATTCATCGAGTGATTACGTC
ACCACCAACGAACATGGTGAATATGAAGTAGCTCAAGGAATCACCGCTAA
TGTCTTCAAATCAATTCTAGTAAGGATTATTCTTCTGCAAGGAAGGAGAT
GAGCGAGGAAAGGTTTTATCTGAATaaagtttcgatctttttgtTAACAA
TATTGTTATAACTTAAATCCTTTGCTTGGTATTTCAAGATGTTTTTTATC
TTCTACAGGACTATTACAAAACTGGTACCATAAATTGTCCTTCATCCATC
AGTTGTTCAGAGTTGAGGGAAGCTTGTGATTACCTTCTTGTTCCTTTCAA
TTCACAAATTGTCAAAGCTCAAAATCTTTGtaaggttttaaaatttttat
tatattacTTCTCAGTACTTCTATTTATTACtaagttttgtttattttca
tcaaaaattaaagtttttactGAATGGCGAATAGCACACCCCTATCTCGC
AGCtccggtggaacttcttcccacagtggggatgaaagttCCTATCAAAA
TCCCAATTGGGTAAGGAATTCTAATATTCCCAggtaaaaaaatccagtgg
gacgGTTTTcgagtgcaatttttttcactgattttcatattgggggtcaa
aacaaagtcaattttccagtttgATGAAATTGTTGGGTATTTCATCAACC
TAGGACGACAGTGGGTAGTGGGTGCCACTGAATCTGTGACACAATGGTGT
AATAGCGATACACTCCAATCATGATTCAATAAATATCTTCTTCGGAGTTA
CGTCAATTCCAACTAACAGTGAATGGTATAGATTTGTTTggttagtttag
tttttttgtataagattcttTGACAATGTGGATATTGCAtaaaaaactaa
cttcaatCAAATCCATTTCGTCCGAAGAATTGTTTAAATAAAGTATAAAC
AATGGATGAAATTATTAGACATTAGCTTATTTTATTTGCAGGTGAACTAC
TGCACGAACTATCAAACGACGGTGCAAGAGAAGTGTTCATGTCGTCGTTC
GTTGAGAATGTTATCTTACCTAAAATGTTGCGTTGTGCGGAGGTAACACG
TCATAGAAAATAGTCCTTTGTATGTTTGTATACATTTGTGAAAGTTTACA
ATTAATCTTATCCGAATTGTCAGGACTCGTATAGTTTCTTTGAAAACTAG
AGTCTTCAAGTCACTTGAAGTCTTCCAAGTGTGTGCTTTAGTTATTCAAG
GATTATTTATTGTTCTTCTTATCTTCAACGCTTTTCAATTCTGCCACTCT
TTTGTAGAAAGGAAATCGTGAATGTCATTTGGTGATATTGAAAGATGATG
ATGTAGTGGAATGGGGCGAGTTTCCGCCTGCCAATGGTGAAGAATACGCA
GAAAGTGAGTACATCTCCCAGTCTACAATTTGTTCTGTTTTTACTCTCAA
GAGAAATCATAAGTGCCTTAgaaattcaagattttcaaaCGAGTAGTTCA
TTCGTTGTGTTTAAAGCTAGTCATCGAACACCGCTCTTCTTTGTATCTTG
AAGAAAAGTTTTCTAAAAAGCATCTTTGATATGGAAAGTAGAACGGTTTG
AGGTGGTAAATcaatttaaattaaattaaaatagaaatattttggagTGT
GATCTAATAGTATATTGAAAAATGTTCAATGTTTAGTCGTCAACAACACT
GCCTTATACCGCTTCTTCAAATATTTCGAAAACCGTGACGTTGCGAAAGA
TGTTTTGATTGAACGTGGCTTGAAGAAAGTGAAGCTTGGCATCGAAGGTT
ATCCAACACACATGGAGAAAGTCAAATATAAACAGCATGGAAAACCTGAA
GGTTCGTTAACAACTTTTTAAACTCTTGCACTAACGAGTCTACGTCATTA
TTGATTTTACACAATCAGTCTTCAATAAAAACTCGCATGGTGGTTTACAA
CATTACAGTCATTGTAGACAAGTAGATGAATAAAAAGCTGATTTAAGACG
TGAAAAATGCTACGAACTTCTCAATTTTCATCGTTTTTCATTTCAGTGAT
ATACAGTTACATCCAAAGACCTTTCGTGCACATGTCTTGGGAGAAAGAAG
GTAGTAAGAGCCGTCATGTAGATTTTCAATGTGTAAAGCCGAAAACAGGC
ATAAGTGGTGCTGTAGATGAACCGGCTGCTCTTGCCAATGACATGGATTT
ACCTCTTCCCGGTGAACTGCTATCTGGTGATGGATTCATCTCCAATGAGT
TGCATGATAACAACGAGTAGACTGTTACGGTGTTCAAAAAAGGTTGAGAT
GGCCAAGTGTCTTTACCATCCACGGATTGGACCAGTCCTTTTAATTTGAT
GATGGTAATCCATGANAGGTTTAGATGACCAAGTGTCTTCACCATCCACG
GATTGGACCAGTCCTTTTAATTTGATGGTAATCCATGACAGCTTGTCGGT
TGTACATGCCTGATGATGCGTTGATATTTGACTCTTATTGTTTTCAGACT
TTGTTCACGACTGTTACTGTCGGTAGACACTGTTTATGAGCAACCTTTGT
TACCTGATAACAGGGATCAGTTTTAAAACGAGGAAATCCACTCCTCCAAT
TTGCCAATAGTTTCTATAAGATTCAGGGGTCAAGTTTGTCAGGAAGCGTT
TAAAATAAACAACTTCAGTGCTTTTTTGCATACATACAGGACACTCttca
caaaaagacaaaattagTTCATTTGTGACAATGTGGTTTAATAATTTAAG
AAATTTCTGCTATAGTTGGCAAGATTAAGTCTCGATTTCCATCAAAGTTA
CAGAAAAGCTGTAGCGTGCTACGTGAAGAGAGCCTTCTCCAATCAATTAC
AATGACGGTCATAATACTTGAGAAAAAGTAGGGGAATTCCTGCAAAATTC
TGAAAACCACGAATGATATTTAAGTGCTCTAACTTACTTCTGAATGTAGA
ATTTTAACTCCGAATTTTACCATTAGGTTTTAAGAGGACCTTAGGATCCC
AGGATTCAAATGCTCAAAAATCTACCAATAAGAttgagaatatagcctga
aagCCACTGAAGCTCTCTATAAAATCCAATGTCCAATGAAATAATGTAGA
AATGTTGAAAATACCATTCTCGCCCGAGTTTTATAATCTAAAAAACGGTA
AAATACCCGAAAAGCTCAATAAATGTTCATGATATTGATAAAAGTTGGAA
GTAAGTTGAACTTTCCTAGaaggattatttttttcagaaagtacTGGAAG
TCTAGATATTTTATTTGTTTACGTAATCTATTTGTCAACTTGtaatttat
tgttttgtttattgttttgtacattttttaacaaattataaTACACACGA
TGATGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025001XLOC_025001Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040951-exon-sc0002640-1491911889:8072..8079TCONS_00040951-exon-sc0002640-1491911889:8072..8079Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:8072..8079TCONS_00040951-exon-sc0002640-1510915933:8072..8079Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:8072..8079TCONS_00040951-exon-sc0002640-1575043694:8072..8079Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1491911889:13982..14611TCONS_00040951-exon-sc0002640-1491911889:13982..14611Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:13982..14611TCONS_00040951-exon-sc0002640-1510915933:13982..14611Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:13982..14611TCONS_00040951-exon-sc0002640-1575043694:13982..14611Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1491911889:14794..14890TCONS_00040951-exon-sc0002640-1491911889:14794..14890Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:14794..14890TCONS_00040951-exon-sc0002640-1510915933:14794..14890Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:14794..14890TCONS_00040951-exon-sc0002640-1575043694:14794..14890Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1491911889:15030..15150TCONS_00040951-exon-sc0002640-1491911889:15030..15150Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:15030..15150TCONS_00040951-exon-sc0002640-1510915933:15030..15150Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:15030..15150TCONS_00040951-exon-sc0002640-1575043694:15030..15150Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1491911889:15763..15863TCONS_00040951-exon-sc0002640-1491911889:15763..15863Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:15763..15863TCONS_00040951-exon-sc0002640-1510915933:15763..15863Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:15763..15863TCONS_00040951-exon-sc0002640-1575043694:15763..15863Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1491911889:16079..16175TCONS_00040951-exon-sc0002640-1491911889:16079..16175Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:16079..16175TCONS_00040951-exon-sc0002640-1510915933:16079..16175Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:16079..16175TCONS_00040951-exon-sc0002640-1575043694:16079..16175Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1491911889:16458..16622TCONS_00040951-exon-sc0002640-1491911889:16458..16622Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:16458..16622TCONS_00040951-exon-sc0002640-1510915933:16458..16622Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:16458..16622TCONS_00040951-exon-sc0002640-1575043694:16458..16622Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1491911889:16818..17063TCONS_00040951-exon-sc0002640-1491911889:16818..17063Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:16818..17063TCONS_00040951-exon-sc0002640-1510915933:16818..17063Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:16818..17063TCONS_00040951-exon-sc0002640-1575043694:16818..17063Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1491911889:17140..18129TCONS_00040951-exon-sc0002640-1491911889:17140..18129Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1510915933:17140..18129TCONS_00040951-exon-sc0002640-1510915933:17140..18129Clytia hemisphaericaexon
TCONS_00040951-exon-sc0002640-1575043694:17140..18129TCONS_00040951-exon-sc0002640-1575043694:17140..18129Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002640supercontigsc0002640:8072..18129 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.2846	37.9852	38.0772	36.5177	14.2189	11.2865	16.9472	18.2708	16.6919	17.238	13.771	13.8864	9.80679	9.78624	7.4043	8.65824	15.528	16.9549	11.1243	12.5018	13.6459	13.4647	19.189	19.6684	18.3671	17.2776	10.938	7.62812	14.131	14.6474
Blast
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BLAST of TCONS_00040951 vs. Swiss-Prot (Human)
Match: KCD20 (BTB/POZ domain-containing protein KCTD20 OS=Homo sapiens GN=KCTD20 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.035e-105
Identity = 162/293 (55.29%), Postives = 211/293 (72.01%), Query Frame = 1 
Query:  478 KQNHSP---------KSISFGGTIPRNREPRTLPSRITLLVNGTRFVVNPCIFTKYPNTLLGRMFNSSSDYVTT--NEHGEYEVAQGITANVFKSILDYYKTGTINCPSSISCSELREACDYLLVPFNSQIVKAQNLCELLHELSNDGAREVFMSSFVENVILPKMLRCAEKGNRECHLVILKDDDVVEWGE-FPPANGEEYAEIVNNTALYRFFKYFENRDVAKDVLIERGLKKVKLGIEGYPTHMEKVKYKQHGKPEVIYSYIQRPFVHMSWEKEGSKSRHVDFQCVKPKT 1320
            K+NH P          S+ FG     +      P ++TLLV+GTRFVVNP IFT +P+T+LGRMF    +Y  T  NE GEYE+A+GI+A VF+++LDYYKTG INCP  IS  +LR+ CDYL + F+   ++ Q+L  LLHELSNDGA + F   ++E +ILP M+ CA+KG RECH+V+L D+D V+W E  PP  GEEY++I+ ++ LYRFFKY ENRDVAK VL ERGLK +++GIEGYPT  EK+K +  G+ EVIY+Y+QRPF+ MSWEKE  KSRHVDFQCV+ K+
Sbjct:   88 KRNHEPFIAPERFGNSSVGFG-----SNSHSQAPEKVTLLVDGTRFVVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISATVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIRCQDLSALLHELSNDGAHKQF-DHYLEELILPIMVGCAKKGERECHIVVLTDEDSVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEGYPTCKEKIKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKS 374
The following BLAST results are available for this feature:
BLAST of TCONS_00040951 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCD201.035e-10555.29BTB/POZ domain-containing protein KCTD20 OS=Homo s... [more]
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