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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040949 ID=TCONS_00040949|Name=TCONS_00040949|organism=Clytia hemisphaerica|type=transcript|length=1043bp
TTGAACgttgaattagagagcatcaattGTGattgaaggtagagagtcta
tcaccatatttccctaacaccctgcttggaagagcttgggattcgaacac
agtccataTGCGGtgaaagtctgtgatcgaaaccttcacactactaATCG
GCAAAATGTTAGTGAGATAAAGTGATCGCGTTATCACCTTATCCAGATAG
TGAGTGAATGTATAcagagtttatcgttctacatctgcaatttcaCATGT
CATTCTCTCTCAatccggctgataatcgaagtataGATCGGcgtcaaatg
agcttagtaaagctcaaattgcagatgtagaacgataaagcTTCAATTAT
ATTGGTAACAAAAGTTGTGGGCAGTGAATGAGACTGTCATTGTTTCTTCA
TTTGACAAGATCATAATAAGCTAATAATGACGCACATGTGTTTAATGAGT
GTTTTAATGAACTTTCCGTATCAAGATTTTTCATACTTATGCAATATAAA
ACCTTCGTGGTCTTTGAGAGATGCTAACTTTATTATCTAACGGCATTTCA
AAGCATTTAAACTTTTGGGTCCAAGGGACTAAAGCCGCTTAAGACTTTCG
CAATTACGTTTCACATGCTTCTATTTAATATTGACCACTATCTTTGTCTT
AGTTCAGATTCACTCCATATATCTGGTGTATTAAATCAAGTATCAATACC
ACgatacttatttcccatccagggcAAAATATTAGTGAGATACAGTGATA
CGCATTGTTTTACACAAACGCTAAGATCTATCactatatttcaaaaaatg
tagtcctccaaaacaaaaaaagccgctgcatacaatccgtcgtcataaTT
ACGGCGCGTTCATTGTGCGTTTTGGATgtgaaataagtggcttcaatttc
tcttgccttagaagggttaaagtttcgcctctagctcttcgggtttgaaa
ctcaatggtcttaGCCTCATCCTCTCGTTGTCTTTGGAATTTCATGGGGA
TTTCAACCAGCTGATACCTCataacttaaaaaattgttagact Run BLAST on NCBI transcript from alignment at sc0002639:530..1572 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040949 ID=TCONS_00040949|Name=TCONS_00040949|organism=Clytia hemisphaerica|type=transcript|length=1043bp|location=Sequence derived from alignment at sc0002639:530..1572 (Clytia hemisphaerica)
agtctaacaattttttaagttatGAGGTATCAGCTGGTTGAAATCCCCAT
GAAATTCCAAAGACAACGAGAGGATGAGGCtaagaccattgagtttcaaa
cccgaagagctagaggcgaaactttaacccttctaaggcaagagaaattg
aagccacttatttcacATCCAAAACGCACAATGAACGCGCCGTAAttatg
acgacggattgtatgcagcggctttttttgttttggaggactacattttt
tgaaatatagtGATAGATCTTAGCGTTTGTGTAAAACAATGCGTATCACT
GTATCTCACTAATATTTTgccctggatgggaaataagtatcGTGGTATTG
ATACTTGATTTAATACACCAGATATATGGAGTGAATCTGAACTAAGACAA
AGATAGTGGTCAATATTAAATAGAAGCATGTGAAACGTAATTGCGAAAGT
CTTAAGCGGCTTTAGTCCCTTGGACCCAAAAGTTTAAATGCTTTGAAATG
CCGTTAGATAATAAAGTTAGCATCTCTCAAAGACCACGAAGGTTTTATAT
TGCATAAGTATGAAAAATCTTGATACGGAAAGTTCATTAAAACACTCATT
AAACACATGTGCGTCATTATTAGCTTATTATGATCTTGTCAAATGAAGAA
ACAATGACAGTCTCATTCACTGCCCACAACTTTTGTTACCAATATAATTG
AAgctttatcgttctacatctgcaatttgagctttactaagctcatttga
cgCCGATCtatacttcgattatcagccggatTGAGAGAGAATGACATGtg
aaattgcagatgtagaacgataaactctgTATACATTCACTCACTATCTG
GATAAGGTGATAACGCGATCACTTTATCTCACTAACATTTTGCCGATtag
tagtgtgaaggtttcgatcacagactttcaCCGCAtatggactgtgttcg
aatcccaagctcttccaagcagggtgttagggaaatatggtgatagactc
tctaccttcaatCACaattgatgctctctaattcaacGTTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040949-exon-sc0002639-1491911889:530..1572 | TCONS_00040949-exon-sc0002639-1491911889:530..1572 | Clytia hemisphaerica | exon |
| TCONS_00040949-exon-sc0002639-1510915933:530..1572 | TCONS_00040949-exon-sc0002639-1510915933:530..1572 | Clytia hemisphaerica | exon |
| TCONS_00040949-exon-sc0002639-1575043694:530..1572 | TCONS_00040949-exon-sc0002639-1575043694:530..1572 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002639 | supercontig | sc0002639:530..1572 . |
Blast
The following BLAST results are available for this feature:
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