TCONS_00040945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040945
Unique NameTCONS_00040945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length204

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040945 ID=TCONS_00040945|Name=TCONS_00040945|organism=Clytia hemisphaerica|type=transcript|length=204bp
AGTTATGCCCAACATGATGTACAACAAAAATTCATAGAAAGCCATGAAAG
TCAGACATTCTAGCAAACACACAAACCTTGTGAATTTGTAAAGTGCTTCA
ATTCTTCAAACATTAAATGTTCCAAACTTGgattcacaaaaaatttccct
tcaacctaaaaaaagattaaaaagaatttATCGCTGACTTTTCTGATGAT
AATC
Run BLAST on NCBI

transcript from alignment at sc0002638:323..526

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040945 ID=TCONS_00040945|Name=TCONS_00040945|organism=Clytia hemisphaerica|type=transcript|length=204bp|location=Sequence derived from alignment at sc0002638:323..526 (Clytia hemisphaerica)
GATTATCATCAGAAAAGTCAGCGATaaattctttttaatctttttttagg
ttgaagggaaattttttgtgaatcCAAGTTTGGAACATTTAATGTTTGAA
GAATTGAAGCACTTTACAAATTCACAAGGTTTGTGTGTTTGCTAGAATGT
CTGACTTTCATGGCTTTCTATGAATTTTTGTTGTACATCATGTTGGGCAT
AACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024996XLOC_024996Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040945-exon-sc0002638-1491911889:323..526TCONS_00040945-exon-sc0002638-1491911889:323..526Clytia hemisphaericaexon
TCONS_00040945-exon-sc0002638-1510915933:323..526TCONS_00040945-exon-sc0002638-1510915933:323..526Clytia hemisphaericaexon
TCONS_00040945-exon-sc0002638-1575043694:323..526TCONS_00040945-exon-sc0002638-1575043694:323..526Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002638supercontigsc0002638:323..526 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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