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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040943 ID=TCONS_00040943|Name=TCONS_00040943|organism=Clytia hemisphaerica|type=transcript|length=1092bp
AGCCTGTAAGTTTATTTCagtctgtacgtttatttcagcctgtacgttta
ttaattccaattttataCCCCCACTGTAagtttattttggtctgtatGTT
TATTACCATAGACAACCGAGAGTACGTGTCTGAGATTTTAGCAACAACCC
CCTTCTTGAGAATCAATCAGCAATCAATTATTTCAAAGCTATCGATTATC
AATATTAATTATCTATCGATTATTTTTAGAAACCATTGATTACATATCGA
TCATATTTTGATCATTATTGAATATTGACTATATACCTTATTGGCCCTGC
TATGCTAGACCTTATTACGACAGCGATGAAAAAATATAATGCAAATATAC
AAAAGGCTGATGTTAAGATATTCACTGTGGACCTTATTACGTCAGCGATG
AAAATCTATCAACAATTGATAGCCAATAGATGAAAAATAACcaaccaggg
gatgtcaatcgaaaaattcgatTACCGAATCAATTGAACTTTATCAAagc
caatcgaatgattgattttctattagccgaattgatcgaacgccaatcga
atttcacatcttttttttgattggaTTCGATTAACGTTCGCTTGGTGTTC
GATTGACgttcgattagtttcgattagCTTCGATTGCATATACTTTTCAA
TTGATACGATTAGTTCGCATACtcatcactcatttttgcctaagtacccc
ccccagGAATTAAGCAAACATTCTTAAGCGTTAAACGgagttgatcgaac
gttaatcgaagttgatcgaagctcgtcgaactcaatcgaaaccaatcgaa
tttcacatgTTTTTCGGTTTCGATTAGAATTCGATTGGCGTTGGATCAAT
Tcggctaatcgaaaatcaatcattcgattggattcgagtagattcgatta
attcgattggttcgattggcaatcgaacgttcgattgacatcccctgccC
TGGAACCAATCAATTATCCATAAGGATAAGCAAAATACCTATCAATCATC
ATCTTACCTAATGACTGGCAATCGATTGGTCTTCGATTGGAAGAAATTAT
CGATTAAACCAAGTGGGGGAGTCTGGGATAGTTCAATCAATT Run BLAST on NCBI transcript from alignment at sc0002636:892..1983 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040943 ID=TCONS_00040943|Name=TCONS_00040943|organism=Clytia hemisphaerica|type=transcript|length=1092bp|location=Sequence derived from alignment at sc0002636:892..1983 (Clytia hemisphaerica)
AATTGATTGAACTATCCCAGACTCCCCCACTTGGTTTAATCGATAATTTC
TTCCAATCGAAGACCAATCGATTGCCAGTCATTAGGTAAGATGATGATTG
ATAGGTATTTTGCTTATCCTTATGGATAATTGATTGGTTCCAGggcaggg
gatgtcaatcgaacgttcgattgccaatcgaaccaatcgaattaatcgaa
tctactcgaatccaatcgaatgattgattttcgattagccgAATTGATCC
AACGCCAATCGAATTCTAATCGAAACCGAAAAAcatgtgaaattcgattg
gtttcgattgagttcgacgagcttcgatcaacttcgattaacgttcgatc
aactcCGTTTAACGCTTAAGAATGTTTGCTTAATTCctggggggggtact
taggcaaaaatgagtgatgaGTATGCGAACTAATCGTATCAATTGAAAAG
TATATGCAATCGAAGctaatcgaaactaatcgaacGTCAATCGAACACCA
AGCGAACGTTAATCGAAtccaatcaaaaaaaagatgtgaaattcgattgg
cgttcgatcaattcggctaatagaaaatcaatcattcgattggctTTGAT
AAAGTTCAATTGATTCGGTAatcgaatttttcgattgacatcccctggtt
gGTTATTTTTCATCTATTGGCTATCAATTGTTGATAGATTTTCATCGCTG
ACGTAATAAGGTCCACAGTGAATATCTTAACATCAGCCTTTTGTATATTT
GCATTATATTTTTTCATCGCTGTCGTAATAAGGTCTAGCATAGCAGGGCC
AATAAGGTATATAGTCAATATTCAATAATGATCAAAATATGATCGATATG
TAATCAATGGTTTCTAAAAATAATCGATAGATAATTAATATTGATAATCG
ATAGCTTTGAAATAATTGATTGCTGATTGATTCTCAAGAAGGGGGTTGTT
GCTAAAATCTCAGACACGTACTCTCGGTTGTCTATGGTAATAAACataca
gaccaaaataaactTACAGTGGGGGtataaaattggaattaataaacgta
caggctgaaataaacgtacagactGAAATAAACTTACAGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040943-exon-sc0002636-1491911889:892..1983 | TCONS_00040943-exon-sc0002636-1491911889:892..1983 | Clytia hemisphaerica | exon |
| TCONS_00040943-exon-sc0002636-1510915933:892..1983 | TCONS_00040943-exon-sc0002636-1510915933:892..1983 | Clytia hemisphaerica | exon |
| TCONS_00040943-exon-sc0002636-1575043694:892..1983 | TCONS_00040943-exon-sc0002636-1575043694:892..1983 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002636 | supercontig | sc0002636:892..1983 . |
Blast
The following BLAST results are available for this feature:
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