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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040908 ID=TCONS_00040908|Name=TCONS_00040908|organism=Clytia hemisphaerica|type=transcript|length=784bp
GGGTGCTATTTTTGTTGTGCTTGTCAGCCTTCTGGCGGGTTAACCTTTTA
CTCGAATGACCTAAAACTTTCACAAAtaaaatcatcaatttttttctatt
cgAGTAAATTTAATTCAGTGCTTGCTAGCCTTATGGTGGGTGCTAATTTT
ATTGTGCTTGTCAGCCTTCTGGCGGGTTAACCTTTTACTCGAATGACCTA
AAACTTATACAAATaaaatcatcatcaattttttttccatttgttGTTTG
TAAAATACGTAAGACatatttgtatatttttcgTCCTTGCTTCAATTAAG
ATCAGGGTTACAAAAACTGAAGTTTCTTTGTCGTTCtctcttttcctttt
ttcaggacAACCGATGGTAACTGGGCGTAGCTGACAGAAAAGAACGTGAC
GATCATAGAACAGATAACGCCAAAAAAGCATCCAAGCTACATTAAGTTAC
CCACATTCAAAGCAGATTGACGAGGCTAAAGAGATGAAAGCTTTTTGTAA
CTATCAATTGACCGATTTTAACAATTACTGTTGATGACGTGGAGTAGAGC
TGCCAAATATTAAATCAATTTATACTAAAATCATGTAGTANtaacgatta
atcactcgtaacaaaggagaaaataccgtaattactattttctcctttgt
tactcgtgattaatcgttaattgcactccaaaccatacgattaatACTAA
AATCATGTAGTATTTCAGTCAGTTACATTAAAATTAAAGTGAAAGATACA
AATACAGAATACAACAGAAATTCATAATATTAAT Run BLAST on NCBI transcript from alignment at sc0002619:18108..19078- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040908 ID=TCONS_00040908|Name=TCONS_00040908|organism=Clytia hemisphaerica|type=transcript|length=971bp|location=Sequence derived from alignment at sc0002619:18108..19078- (Clytia hemisphaerica)
GGGTGCTATTTTTGTTGTGCTTGTCAGCCTTCTGGCGGGTTAACCTTTTA
CTCGAATGACCTAAAACTTTCACAAATAAAATCATCAATTTTTTTCTATT
CGAGTAAATTTAATTCAGTGCTTGCTAGCCTTATGGTGGGTGCTAATTTT
ATTGTGCTTGTCAGCCTTCTGGCGGGTTAACCTTTTACTCGAATGACCTA
AAACTTATACAAATAAAATCATCATCAATTTTTTTTCCATTTGTTGTTTG
TAAAATACGTAAGACATATTTGTATATTTTTCGTCCTTGCTTCAATTAAG
ATCAGGGTTACAAAAACTGAAGTTTCTTTGTCGTTCTCTCTTTTCCTTTT
TTCAGGACAACCGATGGTAACTGGGCGTAGCTGACAGAAAAGAACGTGAC
GATCATAGAACAGATAACGCCAAAAAAGCATCCAAGCTACATTAAGTTAC
CCACATTCAAAGCAGGTAAAAACTACTTTTGCCGTGCACTTTCGAATCTT
TGGTGTATTTTTATCTGATTAATTTTACTTTGTTTATAGATTTCCCGCTT
ATCTCTATCGTATTAGCTTTAGTGGCTCTCGTTTCTACTCATAGGTCAAT
CCAGGTTCCAAAACAAGTAAATTTTAATATGCTCATTTTGATTGTTTTTC
AGATTGACGAGGCTAAAGAGATGAAAGCTTTTTGTAACTATCAATTGACC
GATTTTAACAATTACTGTTGATGACGTGGAGTAGAGCTGCCAAATATTAA
ATCAATTTATACTAAAATCATGTAGTANTAACGATTAATCACTCGTAACA
AAGGAGAAAATACCGTAATTACTATTTTCTCCTTTGTTACTCGTGATTAA
TCGTTAATTGCACTCCAAACCATACGATTAATACTAAAATCATGTAGTAT
TTCAGTCAGTTACATTAAAATTAAAGTGAAAGATACAAATACAGAATACA
ACAGAAATTCATAATATTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040908-exon-sc0002619-1575043694:18614..19078 | TCONS_00040908-exon-sc0002619-1575043694:18614..19078 | Clytia hemisphaerica | exon |
| TCONS_00040908-exon-sc0002619-1575043694:18108..18426 | TCONS_00040908-exon-sc0002619-1575043694:18108..18426 | Clytia hemisphaerica | exon |
| TCONS_00040908-exon-sc0002619-1510915933:18614..19078 | TCONS_00040908-exon-sc0002619-1510915933:18614..19078 | Clytia hemisphaerica | exon |
| TCONS_00040908-exon-sc0002619-1510915933:18108..18426 | TCONS_00040908-exon-sc0002619-1510915933:18108..18426 | Clytia hemisphaerica | exon |
| TCONS_00040908-exon-sc0002619-1491911889:18614..19078 | TCONS_00040908-exon-sc0002619-1491911889:18614..19078 | Clytia hemisphaerica | exon |
| TCONS_00040908-exon-sc0002619-1491911889:18108..18426 | TCONS_00040908-exon-sc0002619-1491911889:18108..18426 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002619 | supercontig | sc0002619:18108..19078 - |
Blast
The following BLAST results are available for this feature:
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