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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040901 ID=TCONS_00040901|Name=TCONS_00040901|organism=Clytia hemisphaerica|type=transcript|length=1310bp
GCGGTAATTGGGGTTCCCTCATTTCACCCTAGTTTTACTActtatatttt
gaatattatgCGTTGAGGCTGAATTTTGTTCTAGAATTGCTCTTATTTTC
TTTCATCATCAAAGTGTCGtgaataaaatttcatgttttttgatACATAC
GACTTTTTCAGGAAGTTTTCCTATATAAATACAGATTTTCTCATAATTTT
TACATTTACTCTCTTTTCCTCAGGACTCTCAACCCAGGCTCCATTACCAT
CAGGTAATGGGAAAACAACTGATCATATATGGATTCCCAGCTGTAAGTTT
TAAATACACgatgtcaaaaatttttgcaGCGTTATTAGTGTTTTTAAATG
ACAAGATCTATAGTTTCAagatattttcctttttgtaaaAAGAACTGTAT
ACAGTAGTgcatcatttttcaattttccaaccCTTTCAAGCTATTTTTCC
ACTCTTCACGACATGAAAGCTGGATTTTTCTTAAATAAGACTCTCTTCAG
TGTATTTTGCTCATGTCAATCCTTTCTACGGTGCTTTTCCAGGATCTAAA
AAAAACCCACCCATCCGTCAGCAATTTTTGCCAAGTGCCCCGGGAACATT
CTATGATTGTAGTCtcacttttttcataaaataaggGATGGTAATTTTGG
GAAGGGAAGAATTAGAATGAGAATAATTTTGAAGTGAAAACTTCAAACCA
ATGTATCATCATGTATCTTTTATAGGGCAAAGATTTCGAGAATGCATCTG
AAATCATTAAAGGTTTCAAAGCGATTGGCCATTCTGTCAGATTTGTTAGA
TTTGTTTCCAGGTAAATTTTCTTATTGAAAGGTTAAAACTGAATGATTTA
TACCATTATTTATCTACGGGGGCCTTAGGAAAAATAGGGTAAGAGAACCT
GTTGAATTTTCAAAGCTATACAAGATTTTAATTAGAGTTATATCTAAGTT
ATATCTAAGCTACCATCTCTGGATGGTAGAAGAAATTCTATTTCTCCACA
TACCATATTCATCTAATATGTATGATCTTTAGATACGCGGAAGTGCATTT
TCAAACAAGTGAGGAGGCCTACAAAGCCTTCTTTGCTGaggaattaaaaa
tttttgggcgACGTGTTTTCAATACAGCCGAATGACTATGTAAATAATTT
GTAACATATtgtaaataattgaaaaatatatacgAGAGACAAACCAACGT
TTTGTATTGAGTTCGTTTTTGAGAATGGAATATTATATTTTGGTCTTACT
TTTAGTCTTACCTTAGTGACTCATGATTCATGGGTCAGCGTAGATTTTTC
GAACTGTTCA Run BLAST on NCBI transcript from alignment at sc0002618:1075..2384+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040901 ID=TCONS_00040901|Name=TCONS_00040901|organism=Clytia hemisphaerica|type=transcript|length=1310bp|location=Sequence derived from alignment at sc0002618:1075..2384+ (Clytia hemisphaerica)
GCGGTAATTGGGGTTCCCTCATTTCACCCTAGTTTTACTActtatatttt
gaatattatgCGTTGAGGCTGAATTTTGTTCTAGAATTGCTCTTATTTTC
TTTCATCATCAAAGTGTCGtgaataaaatttcatgttttttgatACATAC
GACTTTTTCAGGAAGTTTTCCTATATAAATACAGATTTTCTCATAATTTT
TACATTTACTCTCTTTTCCTCAGGACTCTCAACCCAGGCTCCATTACCAT
CAGGTAATGGGAAAACAACTGATCATATATGGATTCCCAGCTGTAAGTTT
TAAATACACgatgtcaaaaatttttgcaGCGTTATTAGTGTTTTTAAATG
ACAAGATCTATAGTTTCAagatattttcctttttgtaaaAAGAACTGTAT
ACAGTAGTgcatcatttttcaattttccaaccCTTTCAAGCTATTTTTCC
ACTCTTCACGACATGAAAGCTGGATTTTTCTTAAATAAGACTCTCTTCAG
TGTATTTTGCTCATGTCAATCCTTTCTACGGTGCTTTTCCAGGATCTAAA
AAAAACCCACCCATCCGTCAGCAATTTTTGCCAAGTGCCCCGGGAACATT
CTATGATTGTAGTCtcacttttttcataaaataaggGATGGTAATTTTGG
GAAGGGAAGAATTAGAATGAGAATAATTTTGAAGTGAAAACTTCAAACCA
ATGTATCATCATGTATCTTTTATAGGGCAAAGATTTCGAGAATGCATCTG
AAATCATTAAAGGTTTCAAAGCGATTGGCCATTCTGTCAGATTTGTTAGA
TTTGTTTCCAGGTAAATTTTCTTATTGAAAGGTTAAAACTGAATGATTTA
TACCATTATTTATCTACGGGGGCCTTAGGAAAAATAGGGTAAGAGAACCT
GTTGAATTTTCAAAGCTATACAAGATTTTAATTAGAGTTATATCTAAGTT
ATATCTAAGCTACCATCTCTGGATGGTAGAAGAAATTCTATTTCTCCACA
TACCATATTCATCTAATATGTATGATCTTTAGATACGCGGAAGTGCATTT
TCAAACAAGTGAGGAGGCCTACAAAGCCTTCTTTGCTGaggaattaaaaa
tttttgggcgACGTGTTTTCAATACAGCCGAATGACTATGTAAATAATTT
GTAACATATtgtaaataattgaaaaatatatacgAGAGACAAACCAACGT
TTTGTATTGAGTTCGTTTTTGAGAATGGAATATTATATTTTGGTCTTACT
TTTAGTCTTACCTTAGTGACTCATGATTCATGGGTCAGCGTAGATTTTTC
GAACTGTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040901-exon-sc0002618-1491911889:1075..2384 | TCONS_00040901-exon-sc0002618-1491911889:1075..2384 | Clytia hemisphaerica | exon |
| TCONS_00040901-exon-sc0002618-1510915933:1075..2384 | TCONS_00040901-exon-sc0002618-1510915933:1075..2384 | Clytia hemisphaerica | exon |
| TCONS_00040901-exon-sc0002618-1575043694:1075..2384 | TCONS_00040901-exon-sc0002618-1575043694:1075..2384 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002618 | supercontig | sc0002618:1075..2384 + |
Blast
The following BLAST results are available for this feature:
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