TCONS_00040900 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040900
Unique NameTCONS_00040900
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length190

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040900 ID=TCONS_00040900|Name=TCONS_00040900|organism=Clytia hemisphaerica|type=transcript|length=190bp
tgttgACAAATAAATGTTTAATTCTAATCTATACTTATTTATAGTATGTC
TATATAATTTACTGTATCTTCCAGAGCGATATCAAATTTCACATCTTTAG
TTCAATCCCGAGAAATCATATTCAGCTTCGATACACTACTAAACTTCGCA
AATCTGCTTAAATCTAGCTTATGTTGATCTTAGACTTTTG
Run BLAST on NCBI

transcript from alignment at sc0002617:4368..4557

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040900 ID=TCONS_00040900|Name=TCONS_00040900|organism=Clytia hemisphaerica|type=transcript|length=190bp|location=Sequence derived from alignment at sc0002617:4368..4557 (Clytia hemisphaerica)
CAAAAGTCTAAGATCAACATAAGCTAGATTTAAGCAGATTTGCGAAGTTT
AGTAGTGTATCGAAGCTGAATATGATTTCTCGGGATTGAACTAAAGATGT
GAAATTTGATATCGCTCTGGAAGATACAGTAAATTATATAGACATACTAT
AAATAAGTATAGATTAGAATTAAACATTTATTTGTcaaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024960XLOC_024960Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040900-exon-sc0002617-1491911889:4368..4557TCONS_00040900-exon-sc0002617-1491911889:4368..4557Clytia hemisphaericaexon
TCONS_00040900-exon-sc0002617-1510915933:4368..4557TCONS_00040900-exon-sc0002617-1510915933:4368..4557Clytia hemisphaericaexon
TCONS_00040900-exon-sc0002617-1575043694:4368..4557TCONS_00040900-exon-sc0002617-1575043694:4368..4557Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002617supercontigsc0002617:4368..4557 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040900 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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