TCONS_00040898 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040898
Unique NameTCONS_00040898
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1976

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040898 ID=TCONS_00040898|Name=TCONS_00040898|organism=Clytia hemisphaerica|type=transcript|length=1976bp
AGAAAACAAAGAACTTAAACGATTTGGCACTTTTGaagtttctttgattt
tattaacATTTGACAGAAAATTTACcgcggcaaaattttgccgcaGCAAA
CAAGGAATAATCAAATTTACGGCAGCTTTTACCGCGGCATTTGCCTCGTG
CCGCGGCCAATTGCCAGGACTGTTACATCTATTTCGATGAAAGAATTTTG
GAATACAATTTCTGTCCAGTCCTTATCTGTTATTTACTGTCCTTATATCT
GTATTTTaggtaaaataaacaaaaacaccaaaaagcTCGAGCTAAATGTG
GCTTCACATTGGTCCAAAGTCAAACACTGTatgttagaaaaaaattatgc
cCCATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTTTAGT
GATGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTCATGG
CAGTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAGGCAG
TCGCCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAAGTGG
GGTGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATGAACA
CTGTGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATGGCTTG
TGATGGAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGtACACAAG
AAGCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTTTAAG
TGGGCTAGCATTCCTACATCAAAATAATAGGATACACAGAGATAtcaaag
CTGGCAACATTTTGTTATCAGAAAAAGGCATTGTGAAGCTTGCTGATTTT
GGATCTGCATCGATGAAATCACCAGCAAATTCTTTTGTTGGGACACCTTA
ttggatGTCACCTGAGGTAATCTTAGCCATGGATGAAGGACAGTATGATG
GcaaagttgatatctggtctCTTGGAATTACTTGTATTGAACTAGCTGAA
CGAAAACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTACCACAT
TGCTCAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTGGTCAA
CGGAGTTTAGTGTATTCATTGCTAAATGTCTTTCCAAACAACCTGGAGGC
CGACCATGCGCTGACGAACTACTGAAAGAACCGTTCATAACGAGACGTCG
TCCACCAAACACCATCCTTGATCTAATAGACAGGACGAAAAATCAAGTCA
GGGAGTTAGACACGGATAATTACAACCGTATCACTAGAATTATCATGAAC
GAAGAAGTTGACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAATCAAC
GCCACAAAGTAGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGACCGAA
TAGAATCATTGAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAGATTCG
AATGGCGAAACAGGTCAGATCATTGTCCAAGAAAGGGTCAACGATGGACC
TTTCATACTGACGCAACCTACTACAGAGGAGGTAGAGGATCGTTTTGCGA
CGTTACGTCCAGCGCAATTTGTTCGCCGACAAATGCAAGAACACAAGTCT
GATGCTTACAGGGAACAACTCCAAGTTTATAAGAGGTAAGTTGTCTACCT
TTGTTTTATGATCACCCTATAAAAAGCGCAGTGGTTATGACCCATTTTCG
TTTGCTTGCGTGTTGTTATTCTTTGATGTTTAGCTTTTTCAAACAATGTG
ACCCCCACGATATCaatgaattttttgacaaatgACCCACAAAAGTGACC
TAATATTTTGACTAACACTATTGATCCCGGTTATTCGAACCTGCACTTAT
TCGAATAATGCGGTTACTCGAAGTGAGATGATGTTCCCTCAAAAATACTC
TTGGTTATTCGAACTTCAGTTATTCAAACTTTCAATTATTCCCCCCCCCT
CTgttattaaaaattttcttatcagG
Run BLAST on NCBI

protein sequence of TCONS_00040898-protein

>TCONS_00040898-protein ID=TCONS_00040898-protein|Name=TCONS_00040898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=430bp
MPHHPNKGNKNPGLKYFSDVDPEKVFYDLREIGHGSFGAVFYARHVQSKE
AVAIKKMSYSGKNTNEKWGDIVKEVEFFIGLDHEHCVKYHGCYLKDHTAW
LVMEYCVGSASDILEVHKKPLQENECAAISHGALSGLAFLHQNNRIHRDI
KAGNILLSEKGIVKLADFGSASMKSPANSFVGTPYWMSPEVILAMDEGQY
DGKVDIWSLGITCIELAERKPPLFNMNAMSALYHIAQNDPPQLNMDNANW
STEFSVFIAKCLSKQPGGRPCADELLKEPFITRRRPPNTILDLIDRTKNQ
VRELDTDNYNRITRIIMNEEVDGAESTPPSSQQSTPQSRNGAAMVENVED
RIESLSLNSRSSSISEDSNGETGQIIVQERVNDGPFILTQPTTEEVEDRF
ATLRPAQFVRRQMQEHKSDAYREQLQVYKR
Run BLAST on NCBI

transcript from alignment at sc0002617:15383..19673+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040898 ID=TCONS_00040898|Name=TCONS_00040898|organism=Clytia hemisphaerica|type=transcript|length=4291bp|location=Sequence derived from alignment at sc0002617:15383..19673+ (Clytia hemisphaerica)
AGAAAACAAAGAACTTAAACGATTTGGCACTTTTGaagtttctttgattt
tattaacATTTGACAGAAAATTTACcgcggcaaaattttgccgcaGCAAA
CAAGGAATAATCAAATTTACGGCAGCTTTTACCGCGGCATTTGCCTCGTG
CCGCGGCCAATTGCCAGGACTGTTACATCTATTTCGATGAAAGAATTTTG
GAATACAATTTCTGTCCAGTCCTTATCTGTTATTTACTGTCCTTATATCT
GTATTTTaggtaaaataaacaaaaacaccaaaaagcTCGAGCTAAATGTG
GCTTCACATTGGTCCAAAGTCAAACACTGTatgttagaaaaaaattatgc
cCCATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTTTAGT
GATGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTCATGG
CAGTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAGGCAG
TCGCCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAAGTGG
GGTGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATGAACA
CTGTGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATGGGTAA
GTTTTTGTTTTCCAGATtgatttttaaatgaattttatttttttgttaca
aaATCTACCCATCATTTATAATGGTCCGTTGACTGAGATATGCATTTATT
TCATGTTCGAATTTGTTAGGCTAGCAAATGACAAATCAACTTAGCTGGAT
TTTAAGGTGAATTAGATTGATTAGTGAAATACTTAGATTGGtgaatcaaa
aatttattaCTTCAGAGTTTGTCGGGCCAAAATAAGACTCCTGTTTTCAT
TTCAAGCATAAAATCAATTAAATCCGCTCATTTGTTTTCAGCTTGTGATG
GAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGGTAAACAACAGAT
TGGTTATGTATCTGTTATGATAAGTCTTTCACTTCTTTTTCTTGACCAAC
TTTTTGGATTAAttttgttttacatttttctgtaagATATAAATGAAAAA
GgcctcaaaacttttcaaaacaaaatttatctttttttagtACACAAGAA
GCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTTTAAGTG
GGCTAGCATTCCTACATCAAAATAATAGGATACACAGAGATAtcaaaggt
gaatttttttcctctttcctTTCAGGTGTCAAGGTTAGACTAAAGGTTTT
AATAAATTGTGTTaacaattttatataaaaattagtATAGGCTAAAATTA
ATTCTCTTTAGCTGGAAGTCTACTTGGAAAAATAAGTTTAtcacaaattt
gtttatcacAAATTTGTTTGTCACAAAAAATCCCAGACATTTGAAGATGC
TAAATCTTAATTTGTAGCTGCCAGCATAAATTTAACTTGGAATAAGTAAA
GTGTGCAGTTTCATAATATCTTTGTGCTATTTGGGTTTATAAATTATAGT
TTTACCCAGAACTTCTATTCCTATATGaagaatataaaaaataattatac
ATTACGTTTCAGCTGGCAACATTTTGTTATCAGAAAAAGGCATTGTGAAG
CTTGGTAAGTTTTTTTTGGTTGTGTTTTTGTGACATTGGTTTACCGTAAT
ACTCTTGGTAGAAATAACTTTTATACTGTACATTATAATTAAAAAACCTT
GGattttacagttttctgaaAAGCCTTCAATTACTGTTAAATACTAAAGT
ATTCTTACTTCATTTTTTAGCTGATTTTGGATCTGCATCGATGAAATCAC
CAGCAAATTCTTTTGTTGGGACACCTTAttggtaatttttttaaatctta
agtTCCAAAGCCAATAATACTACAGAACAGTTTATCAAACCCCTAAATTT
CTTTCTTATGTCAATGAATAAGGATGTCTGTTACAGCAGCCATATAACTG
ATTGAAGAAAAATTGCCTTGCCTTGCTTGTTCTGTTTTAGTGCTGAAACT
AATATAAAAACCCAGTTAAACCTTTGTATCCTGGCAGCTCAaattattga
tttattttttttaggatGTCACCTGAGGTAATCTTAGCCATGGATGAAGG
ACAGTATGATGGcaaagttgatatctggtctCTTGGAATTACTTGTATTG
AACTAGGTGAGCTACTCATTTTTctcgtattttttttttcttatcaaAGT
TTTTATTGTCTGTTTGCCGAAGATGCCAAAAAAGTGGGTTTGGGTATTTT
ATTTCTCTGGTCTCGACTTGAAAACTGACCAGGTTTTGACTTGATTTAAG
AAACTCCTGAACAGAGAACATTAATTTTCTTTCACGTACAGCTGAACGAA
AACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTACCACATTGCT
CAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTGGTAGGCCTC
TGCTAATTACCTCTCGTAATTGTATGACACTTACTTACTGCTTACTCTAA
CCACGCTAAAAAGAAATGAGCCTTTAACCCTTGTACTTGTCCTTATATTG
ATTTAAATcttatttgaattaaaaaaataaatgtcaagaaaaaaagattt
ttgatttaatttttatattttgtgctgcttaaaagtttgaaaaatttata
agaaattaaatgaaatgttgttgtttttgcgCAGGTCAACGGAGTTTAGT
GTATTCATTGCTAAATGTCTTTCCAAACAACCTGGAGGCCGACCATGCGC
TGACGAACTACTGAAAGTAAGATTTTGCACTTTGCAGAAGTCGAAGTTAG
GACCATCTACATTTAATTATATTGGTACTTCGAACACTATCGATGGTTTT
ATTCCTATTCTTAACCCAAACacattgttttcaagtaaagTAACAGATGA
TTCCACTAAAAATTagcttaaaagatttttaagcttGTTCTGTTTCAGTG
TttgaataaatataaaaatcCAATTAAACTTTTAGTATCTTGATAgctca
aattattttcatgCATTTTTTTCTCAGGAACCGTTCATAACGAGACGTCG
TCCACCAAACACCATCCTTGATCTAATAGACAGGACGAAAAATCAAGTCA
GGGAGTTAGACACGGATAATTACAACCGTATCACTAGAATTATCATGAAC
GAAGAAGTTGACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAATCAAC
GCCACAAAGTAGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGACCGAA
TAGAATCATTGAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAGATTCG
AATGGCGAAACAGGTCAGATCATTGTCCAAGAAAGGGTCAACGATGGACC
TTTCATACTGACGCAAGTAAGTAGGACATAGAGAATGTTCTTTTTACTGT
TGTTATTAGGTAATTAAGTTTTTGAATCGACAAAATTTTACACATTGCCT
ATGGCTAAAAAGTcaacattttatttaaaataattcAGCACAGCCAATAA
TGCATCAAATTCAAAAGTATTCACATAATTTTATGGTATACCCCATCATT
ATTGTGTTAAGATTAAACTACCTTACTACCTGAAAGACAATTAACTCATT
ACATTATACATATATCCACCCTTTTAAAGCGTGAGAAGGAGACGGGGTTA
TAGTTTACCAGAAAGATTGGCTTCAAATGTCTATATCCTCCTCGAAGAAT
TAATAACATGACGTTGATAGGGTGTATTGCAATGTCTCATCGTCATAGAA
TGAAATCAATCTGATATATTTCGACTTTTAGCCTACTACAGAGGAGGTAG
AGGATCGTTTTGCGACGTTACGTCCAGCGCAATTTGTTCGCCGACAAATG
CAAGAACACAAGTCTGATGCTTACAGGGAACAACTCCAAGTTTATAAGAG
GTAAGTTGTCTACCTTTGTTTTATGATCACCCTATAAAAAGCGCAGTGGT
TATGACCCATTTTCGTTTGCTTGCGTGTTGTTATTCTTTGATGTTTAGCT
TTTTCAAACAATGTGACCCCCACGATATCaatgaattttttgacaaatgA
CCCACAAAAGTGACCTAATATTTTGACTAACACTATTGATCCCGGTTATT
CGAACCTGCACTTATTCGAATAATGCGGTTACTCGAAGTGAGATGATGTT
CCCTCAAAAATACTCTTGGTTATTCGAACTTCAGTTATTCAAACTTTCAA
TTATTCCCCCCCCCTCTgttattaaaaattttcttatcagG

Coding sequence (CDS) from alignment at sc0002617:15383..19673+

>TCONS_00040898 ID=TCONS_00040898|Name=TCONS_00040898|organism=Clytia hemisphaerica|type=CDS|length=12930bp|location=Sequence derived from alignment at sc0002617:15383..19673+ (Clytia hemisphaerica)
atgccCCATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTT
TAGTGATGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTC
ATGGCAGTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAG
GCAGTCGCCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAA
GTGGGGTGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATG
AACACTGTGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATGG
CTTGTGATGGAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGtACA
CAAGAAGCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTT
TAAGTGGGCTAGCATTCCTACATCAAAATAATAGGATACACAGAGATAtc
aaagCTGGCAACATTTTGTTATCAGAAAAAGGCATTGTGAAGCTTGCTGA
TTTTGGATCTGCATCGATGAAATCACCAGCAAATTCTTTTGTTGGGACAC
CTTAttggatGTCACCTGAGGTAATCTTAGCCATGGATGAAGGACAGTAT
GATGGcaaagttgatatctggtctCTTGGAATTACTTGTATTGAACTAGC
TGAACGAAAACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTACC
ACATTGCTCAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTGG
TCAACGGAGTTTAGTGTATTCATTGCTAAATGTCTTTCCAAACAACCTGG
AGGCCGACCATGCGCTGACGAACTACTGAAAGAACCGTTCATAACGAGAC
GTCGTCCACCAAACACCATCCTTGATCTAATAGACAGGACGAAAAATCAA
GTCAGGGAGTTAGACACGGATAATTACAACCGTATCACTAGAATTATCAT
GAACGAAGAAGTTGACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAAT
CAACGCCACAAAGTAGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGAC
CGAATAGAATCATTGAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAGA
TTCGAATGGCGAAACAGGTCAGATCATTGTCCAAGAAAGGGTCAACGATG
GACCTTTCATACTGACGCAACCTACTACAGAGGAGGTAGAGGATCGTTTT
GCGACGTTACGTCCAGCGCAATTTGTTCGCCGACAAATGCAAGAACACAA
GTCTGATGCTTACAGGGAACAACTCCAAGTTTATAAGAGGTAAatgccCC
ATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTTTAGTGAT
GTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTCATGGCAG
TTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAGGCAGTCG
CCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAAGTGGGGT
GATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATGAACACTG
TGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATGGCTTGTGA
TGGAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGtACACAAGAAG
CCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTTTAAGTGG
GCTAGCATTCCTACATCAAAATAATAGGATACACAGAGATAtcaaagCTG
GCAACATTTTGTTATCAGAAAAAGGCATTGTGAAGCTTGCTGATTTTGGA
TCTGCATCGATGAAATCACCAGCAAATTCTTTTGTTGGGACACCTTAttg
gatGTCACCTGAGGTAATCTTAGCCATGGATGAAGGACAGTATGATGGca
aagttgatatctggtctCTTGGAATTACTTGTATTGAACTAGCTGAACGA
AAACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTACCACATTGC
TCAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTGGTCAACGG
AGTTTAGTGTATTCATTGCTAAATGTCTTTCCAAACAACCTGGAGGCCGA
CCATGCGCTGACGAACTACTGAAAGAACCGTTCATAACGAGACGTCGTCC
ACCAAACACCATCCTTGATCTAATAGACAGGACGAAAAATCAAGTCAGGG
AGTTAGACACGGATAATTACAACCGTATCACTAGAATTATCATGAACGAA
GAAGTTGACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAATCAACGCC
ACAAAGTAGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGACCGAATAG
AATCATTGAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAGATTCGAAT
GGCGAAACAGGTCAGATCATTGTCCAAGAAAGGGTCAACGATGGACCTTT
CATACTGACGCAACCTACTACAGAGGAGGTAGAGGATCGTTTTGCGACGT
TACGTCCAGCGCAATTTGTTCGCCGACAAATGCAAGAACACAAGTCTGAT
GCTTACAGGGAACAACTCCAAGTTTATAAGAGGTAAatgccCCATCACCC
TAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTTTAGTGATGTAGATC
CAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTCATGGCAGTTTTGGT
GCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAGGCAGTCGCCATTAA
GAAGATGTCCTACTCGGGAAAAAATACAAATGAAAAGTGGGGTGATATTG
TGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATGAACACTGTGTGAAA
TATCATGGTTGCTATTTGAAAGACCACACAGCATGGCTTGTGATGGAATA
TTGTGTTGGTTCAGCCTCTGATATTCTTGAAGtACACAAGAAGCCATTGC
AAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTTTAAGTGGGCTAGCA
TTCCTACATCAAAATAATAGGATACACAGAGATAtcaaagCTGGCAACAT
TTTGTTATCAGAAAAAGGCATTGTGAAGCTTGCTGATTTTGGATCTGCAT
CGATGAAATCACCAGCAAATTCTTTTGTTGGGACACCTTAttggatGTCA
CCTGAGGTAATCTTAGCCATGGATGAAGGACAGTATGATGGcaaagttga
tatctggtctCTTGGAATTACTTGTATTGAACTAGCTGAACGAAAACCAC
CACTGTTCAACATGAATGCAATGAGTGCACTCTACCACATTGCTCAAAAT
GACCCTCCACAGCTCAATATGGATAACGCAAACTGGTCAACGGAGTTTAG
TGTATTCATTGCTAAATGTCTTTCCAAACAACCTGGAGGCCGACCATGCG
CTGACGAACTACTGAAAGAACCGTTCATAACGAGACGTCGTCCACCAAAC
ACCATCCTTGATCTAATAGACAGGACGAAAAATCAAGTCAGGGAGTTAGA
CACGGATAATTACAACCGTATCACTAGAATTATCATGAACGAAGAAGTTG
ACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAATCAACGCCACAAAGT
AGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGACCGAATAGAATCATT
GAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAGATTCGAATGGCGAAA
CAGGTCAGATCATTGTCCAAGAAAGGGTCAACGATGGACCTTTCATACTG
ACGCAACCTACTACAGAGGAGGTAGAGGATCGTTTTGCGACGTTACGTCC
AGCGCAATTTGTTCGCCGACAAATGCAAGAACACAAGTCTGATGCTTACA
GGGAACAACTCCAAGTTTATAAGAGGTAAatgccCCATCACCCTAACAAG
GGTAATAAAAACCCCGGTCTTAAGTATTTTAGTGATGTAGATCCAGAAAA
GGTTTTTTACGATTTACGTGAGATTGGTCATGGCAGTTTTGGTGCTGTAT
TCTACGCACGGCATGTGCAGTCCAAAGAGGCAGTCGCCATTAAGAAGATG
TCCTACTCGGGAAAAAATACAAATGAAAAGTGGGGTGATATTGTGAAAGA
GGTTGAGTTCTTTATTGGACTTGACCATGAACACTGTGTGAAATATCATG
GTTGCTATTTGAAAGACCACACAGCATGGCTTGTGATGGAATATTGTGTT
GGTTCAGCCTCTGATATTCTTGAAGtACACAAGAAGCCATTGCAAGAAAA
TGAGTGTGCGGCAATTTCTCACGGTGCTTTAAGTGGGCTAGCATTCCTAC
ATCAAAATAATAGGATACACAGAGATAtcaaagCTGGCAACATTTTGTTA
TCAGAAAAAGGCATTGTGAAGCTTGCTGATTTTGGATCTGCATCGATGAA
ATCACCAGCAAATTCTTTTGTTGGGACACCTTAttggatGTCACCTGAGG
TAATCTTAGCCATGGATGAAGGACAGTATGATGGcaaagttgatatctgg
tctCTTGGAATTACTTGTATTGAACTAGCTGAACGAAAACCACCACTGTT
CAACATGAATGCAATGAGTGCACTCTACCACATTGCTCAAAATGACCCTC
CACAGCTCAATATGGATAACGCAAACTGGTCAACGGAGTTTAGTGTATTC
ATTGCTAAATGTCTTTCCAAACAACCTGGAGGCCGACCATGCGCTGACGA
ACTACTGAAAGAACCGTTCATAACGAGACGTCGTCCACCAAACACCATCC
TTGATCTAATAGACAGGACGAAAAATCAAGTCAGGGAGTTAGACACGGAT
AATTACAACCGTATCACTAGAATTATCATGAACGAAGAAGTTGACGGGGC
GGAGAGTACCCCGCCCTCGTCACAACAATCAACGCCACAAAGTAGGAATG
GTGCCGCCATGGTGGAAAATGTGGAGGACCGAATAGAATCATTGAGCTTG
AACAGTCGATCGAGTAGTATCAGTGAAGATTCGAATGGCGAAACAGGTCA
GATCATTGTCCAAGAAAGGGTCAACGATGGACCTTTCATACTGACGCAAC
CTACTACAGAGGAGGTAGAGGATCGTTTTGCGACGTTACGTCCAGCGCAA
TTTGTTCGCCGACAAATGCAAGAACACAAGTCTGATGCTTACAGGGAACA
ACTCCAAGTTTATAAGAGGTAAatgccCCATCACCCTAACAAGGGTAATA
AAAACCCCGGTCTTAAGTATTTTAGTGATGTAGATCCAGAAAAGGTTTTT
TACGATTTACGTGAGATTGGTCATGGCAGTTTTGGTGCTGTATTCTACGC
ACGGCATGTGCAGTCCAAAGAGGCAGTCGCCATTAAGAAGATGTCCTACT
CGGGAAAAAATACAAATGAAAAGTGGGGTGATATTGTGAAAGAGGTTGAG
TTCTTTATTGGACTTGACCATGAACACTGTGTGAAATATCATGGTTGCTA
TTTGAAAGACCACACAGCATGGCTTGTGATGGAATATTGTGTTGGTTCAG
CCTCTGATATTCTTGAAGtACACAAGAAGCCATTGCAAGAAAATGAGTGT
GCGGCAATTTCTCACGGTGCTTTAAGTGGGCTAGCATTCCTACATCAAAA
TAATAGGATACACAGAGATAtcaaagCTGGCAACATTTTGTTATCAGAAA
AAGGCATTGTGAAGCTTGCTGATTTTGGATCTGCATCGATGAAATCACCA
GCAAATTCTTTTGTTGGGACACCTTAttggatGTCACCTGAGGTAATCTT
AGCCATGGATGAAGGACAGTATGATGGcaaagttgatatctggtctCTTG
GAATTACTTGTATTGAACTAGCTGAACGAAAACCACCACTGTTCAACATG
AATGCAATGAGTGCACTCTACCACATTGCTCAAAATGACCCTCCACAGCT
CAATATGGATAACGCAAACTGGTCAACGGAGTTTAGTGTATTCATTGCTA
AATGTCTTTCCAAACAACCTGGAGGCCGACCATGCGCTGACGAACTACTG
AAAGAACCGTTCATAACGAGACGTCGTCCACCAAACACCATCCTTGATCT
AATAGACAGGACGAAAAATCAAGTCAGGGAGTTAGACACGGATAATTACA
ACCGTATCACTAGAATTATCATGAACGAAGAAGTTGACGGGGCGGAGAGT
ACCCCGCCCTCGTCACAACAATCAACGCCACAAAGTAGGAATGGTGCCGC
CATGGTGGAAAATGTGGAGGACCGAATAGAATCATTGAGCTTGAACAGTC
GATCGAGTAGTATCAGTGAAGATTCGAATGGCGAAACAGGTCAGATCATT
GTCCAAGAAAGGGTCAACGATGGACCTTTCATACTGACGCAACCTACTAC
AGAGGAGGTAGAGGATCGTTTTGCGACGTTACGTCCAGCGCAATTTGTTC
GCCGACAAATGCAAGAACACAAGTCTGATGCTTACAGGGAACAACTCCAA
GTTTATAAGAGGTAAatgccCCATCACCCTAACAAGGGTAATAAAAACCC
CGGTCTTAAGTATTTTAGTGATGTAGATCCAGAAAAGGTTTTTTACGATT
TACGTGAGATTGGTCATGGCAGTTTTGGTGCTGTATTCTACGCACGGCAT
GTGCAGTCCAAAGAGGCAGTCGCCATTAAGAAGATGTCCTACTCGGGAAA
AAATACAAATGAAAAGTGGGGTGATATTGTGAAAGAGGTTGAGTTCTTTA
TTGGACTTGACCATGAACACTGTGTGAAATATCATGGTTGCTATTTGAAA
GACCACACAGCATGGCTTGTGATGGAATATTGTGTTGGTTCAGCCTCTGA
TATTCTTGAAGtACACAAGAAGCCATTGCAAGAAAATGAGTGTGCGGCAA
TTTCTCACGGTGCTTTAAGTGGGCTAGCATTCCTACATCAAAATAATAGG
ATACACAGAGATAtcaaagCTGGCAACATTTTGTTATCAGAAAAAGGCAT
TGTGAAGCTTGCTGATTTTGGATCTGCATCGATGAAATCACCAGCAAATT
CTTTTGTTGGGACACCTTAttggatGTCACCTGAGGTAATCTTAGCCATG
GATGAAGGACAGTATGATGGcaaagttgatatctggtctCTTGGAATTAC
TTGTATTGAACTAGCTGAACGAAAACCACCACTGTTCAACATGAATGCAA
TGAGTGCACTCTACCACATTGCTCAAAATGACCCTCCACAGCTCAATATG
GATAACGCAAACTGGTCAACGGAGTTTAGTGTATTCATTGCTAAATGTCT
TTCCAAACAACCTGGAGGCCGACCATGCGCTGACGAACTACTGAAAGAAC
CGTTCATAACGAGACGTCGTCCACCAAACACCATCCTTGATCTAATAGAC
AGGACGAAAAATCAAGTCAGGGAGTTAGACACGGATAATTACAACCGTAT
CACTAGAATTATCATGAACGAAGAAGTTGACGGGGCGGAGAGTACCCCGC
CCTCGTCACAACAATCAACGCCACAAAGTAGGAATGGTGCCGCCATGGTG
GAAAATGTGGAGGACCGAATAGAATCATTGAGCTTGAACAGTCGATCGAG
TAGTATCAGTGAAGATTCGAATGGCGAAACAGGTCAGATCATTGTCCAAG
AAAGGGTCAACGATGGACCTTTCATACTGACGCAACCTACTACAGAGGAG
GTAGAGGATCGTTTTGCGACGTTACGTCCAGCGCAATTTGTTCGCCGACA
AATGCAAGAACACAAGTCTGATGCTTACAGGGAACAACTCCAAGTTTATA
AGAGGTAAatgccCCATCACCCTAACAAGGGTAATAAAAACCCCGGTCTT
AAGTATTTTAGTGATGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGA
GATTGGTCATGGCAGTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGT
CCAAAGAGGCAGTCGCCATTAAGAAGATGTCCTACTCGGGAAAAAATACA
AATGAAAAGTGGGGTGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACT
TGACCATGAACACTGTGTGAAATATCATGGTTGCTATTTGAAAGACCACA
CAGCATGGCTTGTGATGGAATATTGTGTTGGTTCAGCCTCTGATATTCTT
GAAGtACACAAGAAGCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCA
CGGTGCTTTAAGTGGGCTAGCATTCCTACATCAAAATAATAGGATACACA
GAGATAtcaaagCTGGCAACATTTTGTTATCAGAAAAAGGCATTGTGAAG
CTTGCTGATTTTGGATCTGCATCGATGAAATCACCAGCAAATTCTTTTGT
TGGGACACCTTAttggatGTCACCTGAGGTAATCTTAGCCATGGATGAAG
GACAGTATGATGGcaaagttgatatctggtctCTTGGAATTACTTGTATT
GAACTAGCTGAACGAAAACCACCACTGTTCAACATGAATGCAATGAGTGC
ACTCTACCACATTGCTCAAAATGACCCTCCACAGCTCAATATGGATAACG
CAAACTGGTCAACGGAGTTTAGTGTATTCATTGCTAAATGTCTTTCCAAA
CAACCTGGAGGCCGACCATGCGCTGACGAACTACTGAAAGAACCGTTCAT
AACGAGACGTCGTCCACCAAACACCATCCTTGATCTAATAGACAGGACGA
AAAATCAAGTCAGGGAGTTAGACACGGATAATTACAACCGTATCACTAGA
ATTATCATGAACGAAGAAGTTGACGGGGCGGAGAGTACCCCGCCCTCGTC
ACAACAATCAACGCCACAAAGTAGGAATGGTGCCGCCATGGTGGAAAATG
TGGAGGACCGAATAGAATCATTGAGCTTGAACAGTCGATCGAGTAGTATC
AGTGAAGATTCGAATGGCGAAACAGGTCAGATCATTGTCCAAGAAAGGGT
CAACGATGGACCTTTCATACTGACGCAACCTACTACAGAGGAGGTAGAGG
ATCGTTTTGCGACGTTACGTCCAGCGCAATTTGTTCGCCGACAAATGCAA
GAACACAAGTCTGATGCTTACAGGGAACAACTCCAAGTTTATAAGAGGTA
AatgccCCATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATT
TTAGTGATGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGT
CATGGCAGTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGA
GGCAGTCGCCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAA
AGTGGGGTGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCAT
GAACACTGTGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATG
GCTTGTGATGGAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGtAC
ACAAGAAGCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCT
TTAAGTGGGCTAGCATTCCTACATCAAAATAATAGGATACACAGAGATAt
caaagCTGGCAACATTTTGTTATCAGAAAAAGGCATTGTGAAGCTTGCTG
ATTTTGGATCTGCATCGATGAAATCACCAGCAAATTCTTTTGTTGGGACA
CCTTAttggatGTCACCTGAGGTAATCTTAGCCATGGATGAAGGACAGTA
TGATGGcaaagttgatatctggtctCTTGGAATTACTTGTATTGAACTAG
CTGAACGAAAACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTAC
CACATTGCTCAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTG
GTCAACGGAGTTTAGTGTATTCATTGCTAAATGTCTTTCCAAACAACCTG
GAGGCCGACCATGCGCTGACGAACTACTGAAAGAACCGTTCATAACGAGA
CGTCGTCCACCAAACACCATCCTTGATCTAATAGACAGGACGAAAAATCA
AGTCAGGGAGTTAGACACGGATAATTACAACCGTATCACTAGAATTATCA
TGAACGAAGAAGTTGACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAA
TCAACGCCACAAAGTAGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGA
CCGAATAGAATCATTGAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAG
ATTCGAATGGCGAAACAGGTCAGATCATTGTCCAAGAAAGGGTCAACGAT
GGACCTTTCATACTGACGCAACCTACTACAGAGGAGGTAGAGGATCGTTT
TGCGACGTTACGTCCAGCGCAATTTGTTCGCCGACAAATGCAAGAACACA
AGTCTGATGCTTACAGGGAACAACTCCAAGTTTATAAGAGGTAAatgccC
CATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTTTAGTGA
TGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTCATGGCA
GTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAGGCAGTC
GCCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAAGTGGGG
TGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATGAACACT
GTGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATGGCTTGTG
ATGGAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGtACACAAGAA
GCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTTTAAGTG
GGCTAGCATTCCTACATCAAAATAATAGGATACACAGAGATAtcaaagCT
GGCAACATTTTGTTATCAGAAAAAGGCATTGTGAAGCTTGCTGATTTTGG
ATCTGCATCGATGAAATCACCAGCAAATTCTTTTGTTGGGACACCTTAtt
ggatGTCACCTGAGGTAATCTTAGCCATGGATGAAGGACAGTATGATGGc
aaagttgatatctggtctCTTGGAATTACTTGTATTGAACTAGCTGAACG
AAAACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTACCACATTG
CTCAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTGGTCAACG
GAGTTTAGTGTATTCATTGCTAAATGTCTTTCCAAACAACCTGGAGGCCG
ACCATGCGCTGACGAACTACTGAAAGAACCGTTCATAACGAGACGTCGTC
CACCAAACACCATCCTTGATCTAATAGACAGGACGAAAAATCAAGTCAGG
GAGTTAGACACGGATAATTACAACCGTATCACTAGAATTATCATGAACGA
AGAAGTTGACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAATCAACGC
CACAAAGTAGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGACCGAATA
GAATCATTGAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAGATTCGAA
TGGCGAAACAGGTCAGATCATTGTCCAAGAAAGGGTCAACGATGGACCTT
TCATACTGACGCAACCTACTACAGAGGAGGTAGAGGATCGTTTTGCGACG
TTACGTCCAGCGCAATTTGTTCGCCGACAAATGCAAGAACACAAGTCTGA
TGCTTACAGGGAACAACTCCAAGTTTATAAGAGGTAAatgccCCATCACC
CTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTTTAGTGATGTAGAT
CCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTCATGGCAGTTTTGG
TGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAGGCAGTCGCCATTA
AGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAAGTGGGGTGATATT
GTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATGAACACTGTGTGAA
ATATCATGGTTGCTATTTGAAAGACCACACAGCATGGCTTGTGATGGAAT
ATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGtACACAAGAAGCCATTG
CAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTTTAAGTGGGCTAGC
ATTCCTACATCAAAATAATAGGATACACAGAGATAtcaaagCTGGCAACA
TTTTGTTATCAGAAAAAGGCATTGTGAAGCTTGCTGATTTTGGATCTGCA
TCGATGAAATCACCAGCAAATTCTTTTGTTGGGACACCTTAttggatGTC
ACCTGAGGTAATCTTAGCCATGGATGAAGGACAGTATGATGGcaaagttg
atatctggtctCTTGGAATTACTTGTATTGAACTAGCTGAACGAAAACCA
CCACTGTTCAACATGAATGCAATGAGTGCACTCTACCACATTGCTCAAAA
TGACCCTCCACAGCTCAATATGGATAACGCAAACTGGTCAACGGAGTTTA
GTGTATTCATTGCTAAATGTCTTTCCAAACAACCTGGAGGCCGACCATGC
GCTGACGAACTACTGAAAGAACCGTTCATAACGAGACGTCGTCCACCAAA
CACCATCCTTGATCTAATAGACAGGACGAAAAATCAAGTCAGGGAGTTAG
ACACGGATAATTACAACCGTATCACTAGAATTATCATGAACGAAGAAGTT
GACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAATCAACGCCACAAAG
TAGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGACCGAATAGAATCAT
TGAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAGATTCGAATGGCGAA
ACAGGTCAGATCATTGTCCAAGAAAGGGTCAACGATGGACCTTTCATACT
GACGCAACCTACTACAGAGGAGGTAGAGGATCGTTTTGCGACGTTACGTC
CAGCGCAATTTGTTCGCCGACAAATGCAAGAACACAAGTCTGATGCTTAC
AGGGAACAACTCCAAGTTTATAAGAGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024958XLOC_024958Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040898-proteinTCONS_00040898-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040898-exon-sc0002617-1491911889:15383..16028TCONS_00040898-exon-sc0002617-1491911889:15383..16028Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:15383..16028TCONS_00040898-exon-sc0002617-1510915933:15383..16028Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:15383..16028TCONS_00040898-exon-sc0002617-1575043694:15383..16028Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:16324..16369TCONS_00040898-exon-sc0002617-1491911889:16324..16369Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:16324..16369TCONS_00040898-exon-sc0002617-1510915933:16324..16369Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:16324..16369TCONS_00040898-exon-sc0002617-1575043694:16324..16369Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:16523..16630TCONS_00040898-exon-sc0002617-1491911889:16523..16630Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:16523..16630TCONS_00040898-exon-sc0002617-1510915933:16523..16630Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:16523..16630TCONS_00040898-exon-sc0002617-1575043694:16523..16630Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:16995..17036TCONS_00040898-exon-sc0002617-1491911889:16995..17036Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:16995..17036TCONS_00040898-exon-sc0002617-1510915933:16995..17036Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:16995..17036TCONS_00040898-exon-sc0002617-1575043694:16995..17036Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:17203..17263TCONS_00040898-exon-sc0002617-1491911889:17203..17263Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:17203..17263TCONS_00040898-exon-sc0002617-1510915933:17203..17263Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:17203..17263TCONS_00040898-exon-sc0002617-1575043694:17203..17263Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:17497..17588TCONS_00040898-exon-sc0002617-1491911889:17497..17588Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:17497..17588TCONS_00040898-exon-sc0002617-1510915933:17497..17588Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:17497..17588TCONS_00040898-exon-sc0002617-1575043694:17497..17588Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:17774..17873TCONS_00040898-exon-sc0002617-1491911889:17774..17873Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:17774..17873TCONS_00040898-exon-sc0002617-1510915933:17774..17873Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:17774..17873TCONS_00040898-exon-sc0002617-1575043694:17774..17873Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:18117..18198TCONS_00040898-exon-sc0002617-1491911889:18117..18198Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:18117..18198TCONS_00040898-exon-sc0002617-1510915933:18117..18198Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:18117..18198TCONS_00040898-exon-sc0002617-1575043694:18117..18198Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:18460..18798TCONS_00040898-exon-sc0002617-1491911889:18460..18798Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:18460..18798TCONS_00040898-exon-sc0002617-1510915933:18460..18798Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:18460..18798TCONS_00040898-exon-sc0002617-1575043694:18460..18798Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1491911889:19214..19673TCONS_00040898-exon-sc0002617-1491911889:19214..19673Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1510915933:19214..19673TCONS_00040898-exon-sc0002617-1510915933:19214..19673Clytia hemisphaericaexon
TCONS_00040898-exon-sc0002617-1575043694:19214..19673TCONS_00040898-exon-sc0002617-1575043694:19214..19673Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002617supercontigsc0002617:15383..19673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.82934	5.79788	12.566	13.3991	42.1499	34.0656	33.4772	36.2843	19.2315	28.063	19.528	15.946	19.7634	18.5983	16.694	18.4311	24.8579	27.0503	13.4213	20.8954	21.7792	21.9209	17.6238	19.0052	26.0613	23.6984	20.9371	15.4009	22.6798	25.7678
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR017441Protein_kinase_ATP_BS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Blast
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BLAST of TCONS_00040898 vs. Swiss-Prot (Human)
Match: TAOK1 (Serine/threonine-protein kinase TAO1 OS=Homo sapiens GN=TAOK1 PE=1 SV=1)

HSP 1 Score: 452.21 bits (1162), Expect = 1.842e-145
Identity = 213/325 (65.54%), Postives = 254/325 (78.15%), Query Frame = 2 
Query:  347 MPHHPNKGN-KNPGL-KYFSDVDPEKVFYDLREIGHGSFGAVFYARHVQSKEAVAIKKMSYSGKNTNEKWGDIVKEVEFFIGLDHEHCVKYHGCYLKDHTAWLVMEYCVGSASDILEVHKKPLQENECAAISHGALSGLAFLHQNNRIHRDIKAGNILLSEKGIVKLADFGSASMKSPANSFVGTPYWMSPEVILAMDEGQYDGKVDIWSLGITCIELAERKPPLFNMNAMSALYHIAQNDPPQLNMDNANWSTEFSVFIAKCLSKQPGGRPCADELLKEPFITRRRPPNTILDLIDRTKNQVRELDTDNYNRITRIIMNEEVDG 1315
            MP     G+ K+P + + F   DPEK+F DLREIGHGSFGAV++AR V++ E VAIKKMSYSGK + EKW DI+KEV+F   + H + ++Y GCYL++HTAWLVMEYC+GSASD+LEVHKKPLQE E AAI+HGAL GLA+LH +  IHRDIKAGNILL+E G VKLADFGSASM SPANSFVGTPYWM+PEVILAMDEGQYDGKVD+WSLGITCIELAERKPPLFNMNAMSALYHIAQN+ P L  +   WS  F  F+  CL K P  RP ++ELLK  F+ R RP   ++DLI RTK+ VRELD   Y ++ +++  E  +G
Sbjct:    1 MPSTNRAGSLKDPEIAELFFKEDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSTEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHTMIHRDIKAGNILLTEPGQVKLADFGSASMASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSN--EWSDYFRNFVDSCLQKIPQDRPTSEELLKHIFVLRERPETVLIDLIQRTKDAVRELDNLQYRKMKKLLFQEAHNG 323
The following BLAST results are available for this feature:
BLAST of TCONS_00040898 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAOK11.842e-14565.54Serine/threonine-protein kinase TAO1 OS=Homo sapie... [more]
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