TCONS_00040891 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040891
Unique NameTCONS_00040891
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040891 ID=TCONS_00040891|Name=TCONS_00040891|organism=Clytia hemisphaerica|type=transcript|length=367bp
aagaaaaacatgGAATCTTCACAAGCAAGAAAGGtcattgaaattttgga
aaacatAAATGGTGATCCATCTCGAGGCGAGCTTAATATTGTCAGGAATT
TCTTGCTGGCAAGAATTACCTTCGAAAATCCCAATAGAACTGGGGTATGC
GCAAACATGACGATGAAGGAATACGAAAACGTACTCACCAAGGACGATCA
CAAGGTGATAAAGGTTCGGAAACACAAAACGTTTTACAAGCATGGTTATG
CTCATGTTGCGATTTCCAACGAACTGTTTCAGCTGCTCAAGTTGTACGTT
GACAAAGTTCGTCCCACATTCAGCCGTCCTGATTCCGAAAACGTATTTAT
CAGCTGTACCGGGCGAG
Run BLAST on NCBI

transcript from alignment at sc0002616:2373..17078-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040891 ID=TCONS_00040891|Name=TCONS_00040891|organism=Clytia hemisphaerica|type=transcript|length=14706bp|location=Sequence derived from alignment at sc0002616:2373..17078- (Clytia hemisphaerica)
AAGAAAAACATGGAATCTTCACAAGCAAGAAAGGTCATTGAAATTTTGGA
AAACATAAATGGTGATCCATCTCGAGGCGAGCTTAATATTGTCAGGAATT
TCTTGCTGGCAAGAATTACCTTCGAAAATCCCAATAGGTAAGTGCTCTTC
TTTCGTCTGGCTCTTCCTAGAAAATGATGTAAGCGTTTATTTTTAGTTTA
TTTTCACTGACTTGATGCCCCTGTACCAGTATCAGACCCACTTCACTTCT
TAGGACAAGTTTCTTTCGCATTATTACGCCCACTATCTTTCAAATACATT
TATCGACTTTTTGCATAGTTCGATTTAGACGTTTATTTATTTTTTGTTCA
TTTATATCTCCATAATAAGAAAAAAAGACGGGAATTTATTTTTGATCCGC
TACGATACTAATAAGCGTCAATTTTGATTTCGTTTTAGAACTGGGGTATG
CGCAAACATGACGATGAAGGAATACGAAAACGTACTCACCAAGGACGATC
ACAAGGTAATAAAGGTTCGAAAACACAAAACCTTTGACAAGGATGGTTAT
GCTCATGTTGCGATTTCCAACGAACTGTTTCAGCTTCTCAAGTTGTACGT
TGACAAAGTCCGTCCCACATTCAGCCGTCCTGATTCCGAAAACGTATTTA
TTAGCTGTACCGGGCGCAGCATGGAATCCAGTGCTATTAGTCAGATAATC
AATCGGACTCTCGGCGGAGCTCATTAAATTTTTTTTTGTATTACTATAGT
AACATTTTCCAAAAAAAATATTTTCCATCAAAGACACATTATTTTCGTTG
ATTATCTAACCATTATCAAAATATCTTTAGCACGGCACGGTATTCTTCTT
CCGGCCACAGTATGCCTCTTTTTTAGTATTAATCTTACTCTTAGGAGCCT
GATAAACGAGACCCACTCTTTGTTNCTAACCATTATCAAAATATCTTTAG
CACGGCACGGTATTCTTCTTCCGGTCACAGTATGCCTCTTTTTTGGTATT
AATCTTACTCTTAGGAGCCTGATAAACGAGACCCACTCTTTGTTAATTTT
AAAATAGTTTGGTACTAGTCACCAATTAACTTATTTCGGGGGGGGTTAGA
GGTACAATCCCCGACCCCTCTTTTATTAATTTCCGTTTAATAAAATTTGA
AGATTCTCTATCTCTAATCTATTTAACACCTGAGAGTAACCTAAATTATC
CATAGAGAAGACCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGGGTAATGTTATTATAATATGGGTAAAAGTACC
CCTTTTTTAAACTGACTGAAATTCGAGCCGTTACTAGCAACCCTGCGGGG
CCCAAGGCCCCGAGTATGCACCCTGCACAGTGACAAGCCGTTACTAGCAA
CCCTGACCCTACCTAATTGATTGGTAATGACCCAATACCCCCTGGACCAC
GGAATGACGGATAGGAAAAATTAAAAATGATACTTCCGACCGTCAAAATA
TGATACTTCTGGCCGTCGAAGATACTTCCGTCCGTTCACGAAAAAAAAAT
TTGCGGGGCCTCATCCCCATTGGAAACTTTTGCAAAAATTTCGTCCCCTT
TGGAAAAACTATCCTTAAATTTCAGCCCCATCGAGAAATTGACTTTGATT
TCATCCCCATATTCGCAAAATTCATTTTTTAGAAATTACACTCCGAAACC
ATCACCACTGGATTTTATAACCTTAGAACAATATAGAATCTTTGTCCACA
TTGAGTATTCAATNCTGGATTTTATAACCTTAGAACAATATAGAATCTTT
GTCCACATTGAGTATTCAATCGAAATTTTTATCCCCGCTGTAGGAAAAAG
TTTTAACGCGGCTGTGAGACAGGGGTGTCTTGGTGGACCTAAAAGGATAA
GAATAAAGGAATCTATATGTGGTGCTGCAAAAACTGCAAAAAAGAAGTAT
ATTTTCACGAGACGATTTTTCCAAAAATATTTTCATTTTAAATTTAATGT
GACTAATCGCGGCCCATCTTTCAATAGTCACTCCAGACTAACTACTCTTG
TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATG
CGTCTGTACATATGTCGCAATTTTAGATTACAATCGTAGCAAATTTGAGA
CTTTTGTAGCATTTTGGGTCATATGTAGCATTGTGACATTTGTAGCGCGG
GACATTCGTAGCGCGGGACAACCATATGTAGCGATGCTACATTTGTCTCG
TTTGCCGCTACGAATGTCTCGTTCGCCGCTACGAATGTCTCAGTTTCATA
GTGCGCGATTTCTTTCATAAGTTATAAACTTCGCATATGGCGCCTTGTTG
TTTAGCTCACATGTTAGCTGGTTCAAGGCAAGAATTGTATCTTCTTGCCT
TCCTGACCTTCATTCAACAACGTTATTCTCTTATCACATCATCATCACAG
TTACCTGCAACTGCAACATGTCCACGAAAGTCCATCAATTGCATTTCCTA
AACAGAAGCATCGCTCCATATCCAATTGTACCTGGCTTAAAAACCTTCAT
TGGCAGGTAGGGTTTCGTTTTGTTTTGATTTGGGTTGGAATCTCATTCTT
TGGTGAATCAATTTTATTGGTTAGAAGTTTGGAAGTTAGAAGTTTTGCCC
GGGTGATTTAAAACATTACATTATAGCTGGTTAGTGTAAGGAGTACCTCT
GATTCAGACCCCTGGATTCAGACCCAATCAATCGAACAATAATCGATTAA
ATCAAACTCAATCGAACAATTACATAAAGTATGATTTTAAAAAATTAATC
GAACCTAATCGAACACTCAAAATTTTTTAAGCAATGGGAGGAGTACCATT
AGTTTGGTCAGTAAAAAGTTAGATTAGTCCGATGAAATTAAATCCTCCTT
GCCTCACTTGCAAAAACTATATTGTGGGCTACAGTGGCACGCGATATATA
CCATTTTGACAGTTCCCAGATATTTGTCTATATCTGGAATAAACTCCGTA
GCCCCCCTATTTTTTTGATTTTGCGACGGGGTTTATAAATATATGTAGTT
TTTAAACGTTCAATGGACCGGGGTACCTAATAGCCGGGGTTTGGAATAAG
CGGGGGGGTTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTAATAGCCGGGGGGTTTGGAATAAGCGGGGGGGGTTGGAAAAA
ATTTCAAAACTTAATAAGCGGGAGGGTTGGAATAAAAATGTCCTGGGTGG
AAAACTTTTGAAATGGAGGCTAATACAGCAGAATTAGGACAAAAGAGAGG
GAGCTTTCAGAAACATTTTCCCAAAAATAAATAAGCGGGGGGGTTGGAAT
AAGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATTAGCGGGGGGACG
GCTATTAGGTACCCGAGAGTATGCATTTTTATGTCAACATACTAATTAAG
AAGTAATTCAGAAATAAAACTTTATCTCATATTTTCAGTTTTTGAAGGTC
TATGCGCCTTTATCACAGCAATCCAATTTTATGTCCCGTACCGTGAGATC
GGGTAACTTGCATCAGTGGAGGCTAACATGCATAACCTGGCTGGTCATTA
AAATACAAATTAAATCAAAACAAAAATGGTAGAGTATAGCTGCCAGCAGA
GCTGCGTAGTTCATTTGTTTTAAAATTTTGCTGCTTTGATTCTTCAGTCA
TTTGATATGGCTATGCAAGTTTCCCTCCATTGATGCAAGTTACCCGACTT
CACGGTACACAACAACTCCAATTACACTGCTTCAAATATCAATGATGAGG
AAAAAAATTCTGCCCAAAATTTGTTTTTTTTCCTTCAGGGGACCTATATA
TGTGTCATGTTTTTCAGACAGTTTATCTGAAAAGAAATTATTTTTTTAAC
CAAACCGAGTGAAATAAAAATATTTTGTATTCTCTGAAGACATTGTTACG
TATATGTATCAAAATGCACTAAAAGTTTTACCATACGTATCCTACTTTTT
TGAGATATTTCACACTGTGTATTGCGTACCGGACAAAATTAGGATTTCCA
TTTGTCCCGTACACTACAAAATTTGAAAATCCTTAAATTTAACAAGGAAT
TCTATTTTGACCAAACCTTTTGCATTGATTGGCAAATCTATACCTTGTTA
ACCGGTTATTTTTTCGTAGCGGGCTACACAGCTACACTGTCCAGAGTTGC
CCGTCGTTAGGAAAATTCATTGTGATGTCACTTTTTCAAAAGAAAATTAA
CAATACGTTGATATATATCATTTATAACAATTTTTTATCTCTTTTTGCTT
TATTTTGCTATTTTTCCTGGATAAAGCGCTGAAAATCAATCGAAGCTGAA
GGAAACGGTTAACAAATAATGACCGGTTTCTTTCGGGCTGTACTGAAAAT
ATTGCCCTCGGTCAACGCAACAACCTCGCAAGCTCGCTCATTATTTGACC
TTGGGCTGCCTTGGGCAATATTTCTCAGTACAGCCCTCACTAACCGGTCA
TTATTATATTAATATTGCTTTTTTAGATATCCAAGTTAGTTGTATAAAGT
TGTATAAATGAAAGTTATCGAGGGTCATAAGAGTGATTTTCCCCCTATTC
AAGTACAATAGTGTATACCACAAATACCCCATTGACTCTGATAGACCTAC
AGTATTTTATAATAAAAAAGTTAAGTTTTTCTGAAAGTCAATTAATATTT
TGTTTATTTTGAAATTGTTTGATGGAGTTCGATTAGCTTGATTGTTCGAT
TGGTTCGATAAGTTCTATTGATCGGGTCTGGTCTGATATTTACAACAATT
AATCAAACAGGTCGATTTATGAAATTAGTTGAACTTTTTCAAAATTAATC
GAACAACAAAAAAAGTGCAATTAAATTCTCTAATTGAACTATTTAAAAGT
CACTAAAGACATTAAAGTTCAAAAAAGTTTGTCGACAACAAGAAATGTTC
AACAAATTTAATTTTTAAGGTTGCTATCCACTCTACGAACAAGAGAGGTA
AGACTACCAAGCAAGACTTATAACCAGCATGAGATTAAAAAATTTTGTGT
TTACTTACAAATCTTCCTAATTTTCCAAAGCTCATTTCTCAATTACCAGG
AGTCCTGGTATTATGCATAACAACAGTATCAGTATATCATGAGTTAGTTT
TGGAGTCATTTCAATGTTTTTGTTCCTAATTTTTGGAAACAAAATGGTAT
TGTGATTAGGAAAAGGTCTATTTTATGCTGCTTTTCTAGTGATCATAAAA
ATTTCAGGTTTTTATGGAAAAAATGTTCTTGAAAATTTTGATTGCTGGTG
AAAATTTATTTAAGCTACCTGCATTTTGTTGAATTGAAGTTTGGAAACTT
ATTGCTAGGAAACTTTACTTTTAGCACTTTTCTGAGATCTTCTGGCTGCT
TTTTTCAGCTTTTATCTGATACATACACAGCCAACAAAATAAAGGCCTAG
AAAATACCCTGTGCCCTGCCAGGAAAGTCATGGGGGCTGGGTACGTGCAG
ACGGTAAGGGTTGGTTTTTTCGTTATGTATGTCAACAACTGTGTAGACTG
TAGACAGGACCTTTTAACCTTATGACTGACCGCCCAACAAATTGAAGTTA
CTTTTTCAGGAATGAGGAAGTCTTAGCCAACATACCGTTTACCTTAAGAG
AACATTTTTGGCAGATTAGTTCTTTGCAAAAAATCAAGATTTACATGATA
TTAAAAAATAACCTCTTATAACCAATATTGGTCTAAAACACCCATTTTTA
GGCAAAATAGAAAAAATTTAGTTCTTGCTTTGTAGAATTATAATCTTACT
AACATCCGTGCCAAATTAAATTTTTAATTTCATTTTGCCAAAATTAGTAC
CCCTTAAGGTATTCCAATAATGTTGTTTGATGTTTGTTTTTTCTGGATCC
GAATGAAGAGATTTGGAAACNAAATAATCTTACTAACACCCCTGCCAAAT
TAAATTTTTAATTTCATTTTGCCAAAATTAGTACCCCTTAAGGTATTCCA
ATAATGTTGTTTGATGTTTGTTTTTCTGGATCCGAATGAAGAGATTTGGA
AACTTATGACAGCTTTAGAATGCTTTATACTGCTATTAGACAATTCTACT
GTTCAAAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGTGCGCACTCGTCGG
GATTTTTAGCGTGGAACAAGTCGAAAATCAAAATTAGAACATTCCATCCA
TCATAACTTATCCTTAACAACTCCAAACTTCTTCATTCTTTTTTTTTTAA
TACTCAGAATTTATCACAGAAAACAAAGAAACAAACCCCTACCTTTAATA
AAAAGATATACCATTTATTAGACATCAAGGTGAAAAAATGGCAACTCGGA
ATTCCTGGCACCACCGTCCACCTTGACCACCATTTTTAAAATGGCTATTG
CTATTGAGCTGGATTAGTTATAGACTCCTGTTTTTTTTTATAAAACGCGG
GAAAGATAGTACCTTAGTTTGTCACGTGGTAGCCTTTTCGATAATCTACG
GGTCGTCTTTAAATCAAGAAAAAAGAAGAAATTTCGATTTTTCGGCACTT
TCCTGAAATTTTTATCAGGACTACCATATATCCATATATCGTTGGAAAGC
TAAGGGTTTCAGGTTTTCATTGGTAAAATTTGTTTTTAGCTATCATTTCC
AGCTCATTAGCGATAGGCTAAAGTTTAACAGTCATCGGGCGGATTTTCAG
ACCGCGCCAGCAAAACTCCTCACGCCCCGCCACACGGAAGACTAGATTTC
ATCCGCCATTTTTGGCGCGATTTTGGTGCTTCCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAATGACCCCTCATTTTTCTCACAAAGGTAA
GGACTTTCAAATAAAATTAGTTTGGTTTTCAAAATTTGAGGGGAAAATTT
TGGCCTGACCACCCTAACATCAGCTTAGGTTATTTTTCATTCAATTTTTA
CCATGTATATTTCAGTCGTTAGCTAACTTTTTAAATTTTTATCAAAAACT
ATGTTTGTTTATTTACTGTTAAGAGCCATTTTTTTTAAGAGTCTTCAGGG
TGTGATACCTCATCCTCTTGGATTTTGATGAAATTTTGACCAAATGATCC
ATCACACAAGAAAATAAGACCCTGAAAATTTCACCTTGATATCTCAAGTA
GTTTTGAAGATACAGAGTCTCAAAGATAGGCTGCTAAGCGGAAATTGACC
CCTAAAAATCATGAACTCTGGTGGGGAGCAGATTTTGAAAGCCAATGAAT
TTTTATTCAAGTACATTAGAAAGCTGATTTACAGTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAATATGTAAAAAAATGGGACTGACATCTGGCCTTTCCTACCATTCCA
GGGCCTATATTTTCAGGAAAAGGCTCAACCTTTCACAGTTTGGTAACTAT
TATTCCTAAATATAAGCAGGTTACTTCAACTAAATGGGTTTAACAGTACT
TAATTCCTATTCAAAAACTTTTTAGACTCATTCAGAAATCCTACTTTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGTGTGATGGATCATTTGGTCAAAATTT
CATCAAAATCTAAGAGGGTGAGGTATCACACTTTCTTTATTCTGAAGATT
TTTAAAAAAAATGGCTCTTAAGTTTGTTGTCTCTTTTGGTTGTCAAACTT
TAATTAAATACTCACAAATTTTTCAAATATAAAGTTCGATTTTAAAGAAA
TCAAACAGCCAAACAGTACGACCCTCGACATGGCCCGAGAATTATCGGGC
CTCTTCGGGCCATGTTCGGGCTGAGAGACCCTATCAATTCTTTTGGCCCG
AACTTGACCCGAATCATTCGGGCCACGTTCGGGCTATGACTATATAATAC
AAAATATAATACAAAATCTTAAAAAGTATGGTTCATGGGTTAATGCTGTA
AAAACCCATCAATAAGTCAGCATCACCAGGGTTGCGATCAACCTGCGCTT
TCCTGAAGCGAAAAGTTCATGGGTAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAATTTCCATGT
GGCGAGTGTTACAAAGCTGTGAAATGGGGTCAAAGAGCAATAGCATGTGA
CTCGTGTGACCAATGGTTCCACAAAGATTGTATTGAAATGGACAGTCTTA
TCTACCAAGCTTATGAATCAACTCCTGATCTCACCTGGGAATGTTGCAAC
TGTGGTATCAAAAATATCAGCCCATCATTATTCGACAAAACCCTCAACTC
CTCAACTGATTCAAACATCTCTAATGCCAGCGATAACACACCAAAGCTAT
TAGCCAAACAACTCCGTATCTTACGCATAAACTTTTGTAGTATCTGGGAC
AAGAAAGAACTCCTTGAAGATGCGCTATTCGATGATAACATTGATGTTAT
CATTGGATCTGAAACNNNNNNNNNNNNNNATTGTCTTGCTATGTGTATCT
TTGTTTAGTATTTTTTTGATAATATTTTGACATGAAAAGGATACTTTAAT
TTCGAAATTCTTTAACTCTTGATTATCTTTCTTCCTTTCTAAAAGACCTA
AACAAAGTGTATATATTAGGAGTGGTGTTATCTTTCTTGACTCGTGAAAA
CAGTATGATCTTTACAGGCTTCTCATTGCAGTATACACGTTATCATACAA
GGTTTGATGCCATATTCTTTATTAATTGGAAACTGAAATCCTTGACATAA
TGACGTAATCTTGACCATATATCATNATTAATTGGAAACTGAAATCCTTG
ACATAATGACGTAATCTTGACCATATATCATGGACGATTCTGATTGTCAT
CTCCATTTAGAATTTTGACCGTACATGATTAAAATTGCTTTTTCCATACC
ACTGGACAATATACCTTCCACCCCTATGAACTTTTTTTCTGGAAGAGCCC
AATGTTATAAAATGGGGAAAGGGGTCTCTAAGTATCATTGGAAAATCTCC
CACAGAGAGAATGCCTACAGAAGAGCACAAGCTAGTAATTTTGCCCTTCT
CCTTTGACCATACGCTGAAAATCATTTCATTCCTGACTTTCTCGATGTCA
TGATCAATAGTGAGGGATGAATTAAGAAAAAACGTGAAGGGCTACAGGAG
AATCTTCAAACCTTTAATTTTAGAGTAGCAATCATGACAACGATTGAATG
TAATGGTTTTCTTTGTTCGCAAATGATACATTCTTTTGAAATTTGGCGTT
AGATTCAACTTACAATTAATTTCTATTTCTAATTGATTTCGTATTCTTTG
TGAAAACAATACGGGTCGCAGTTGTTCGATAATTGACTTTATTTCTCATC
CAAGAAATTCTTCTTTAGCCCCTACGGTAGTTTAACCCTTTAAGTGCCAA
TGTCGTATATATGAGATATTTGACCATTTTTGGTCAACGAGTGATCCAAG
AACCTCCAAATGTGGCCCTGATTAACTTGATTCAGTCCTCCAGCAAATTA
GTTTGAAGTTTAACCACTCGGCACCTTTCTATCATTCCGTCAGGTCCGCA
CAGCGGGCTATAAACGAGCTTCTTACTCCTTCTAGATCCGGAGATATAAG
CCTTTAAAGTTTGAACTAGCGATTTTCTTTAAAAAACTTGGGAAAAAATT
ACCGTGGCACTTAAAGGGTTAAGCACACATTTATAAAATTGTAACACGTT
ATTTTTCTCTCCAGAAACGACAAAAAAGACCTTGTCCGGTGTGTAAAGCT
CCATTGACTGGCCTTCCAAGGCATATGAGGGATGTCCATGAATGGAGCTG
GAAAAAGTCTGCCAAAGTCAACAGTCTCTTTAAATCAAGGCAACCGTATA
CAAAGAAGGACGGTCAATCAACAAGCGAACAGTCTGCGAAACGAAAAGGG
AAACGCTGCCCCATGGAAGGATGCTTTTTCGTCGGTATTCAGGTGGGGAG
ACACCTCCGTAAGGAACACTGTATGAAATTTGATGATGAAAATTATAAGG
ATGCACTCAAGGCAGCCCGTGTCCATGAGCCTTTGACGTCCGAAAACATC
CAAAAGAATCGCCGGGCTGTTGCCAGAGAGTTTGAACTTGCTGAGAACAT
CCAGGAATATGAAAAAGAAGTTGAGAGTGGTACCGGAAGGAGGTCTGAAG
AGAAAGTTATTGATTATGCAATGATTATGTTCGAAAGGTACTTGATTTCG
GTTGAAGGAAATTTCCGTGATAAGAGATCAGCTAAACAATGCGTCCAAGA
AGTGAAAACGGTTGCTCTCCATCTTGGATCTCTTGTTGCCCTATTCGACA
AAAAGAAGGTCAGAGATGGGTTCTTCCAATCGTACTTAGACCCAAAGTCC
AAACCAAGCACATCGAAACACTACCTAACGTCATTGATTTCGTTCATGGG
CTTCGTTATCACTGAAGGTCTCGAGAGTCTCGCAGACATCGTAAATCAAG
ACGACGTGGTTGCCATGAAACTTAGACTTGGTAATTGGAGGAAGGCTTAT
GGGAAAAAGCAAGATGTTTTACGTTGGGAGAGGGACGACGAAATCAACGA
AGTTCTTGTGACACTCGATCAGATTAAAACTTTTGAAGAAAGCGAACAAG
CTATCAACGCAATCACGATCTTGGAACAAGAGACTGATCTTCTTCCCTCA
AGAAATGAATTTCTAACCGTCCGTGACTATCTCTTTGCAAGAATTGCTTT
GGCTAATGCCCACCGGTAAGCACATTTTTCATTTTAAGATGTCATTTTGG
CGGTATCAGGATGTTTTGACCAAAACCTGCCCTCGGACAATGAAATGTTC
TCGTATGCCTTATATGTACGGCGCCGTCTGGTGATTTTTACTTCTTTCCA
ACCCCGTCGATTTTATCATAACCTCCATTTGTTCATTTTGGAAATAATTT
TAGCTGTTAAATAAAAGTTCCCTGTTTTCACAGGTTTTAATATTCATCTT
ATTTTATTGTGGATAGAGGTTTTCCATATTTTGTTAAATATGTAGCATCT
GTCATTATGAAAACAAACGTTCGATTTTTGTAAAGGATCGTATTGACAGA
TTCGAAGGTTTGCCTTCATAATGGCGGAATATACGTAATTTAACAAAACG
AAATGAATCAACTGAAAAATCTTTCAGAAGAATTGTTGCTAACCCCAAGC
CACCTTGATATTTGATTTCGTTTTAGAACTGGGGTATGCGCAAACATGAC
GATGAAGGAATACGAAAACGTACTCACCAAGGACGATCACAAGGTGATAA
AGGTTCGGAAACACAAAACGTTTTACAAGCATGGTTATGCTCATGTTGCG
ATTTCCAACGAACTGTTTCAGCTGCTCAAGTTGTACGTTGACAAAGTTCG
TCCCACATTCAGCCGTCCTGATTCCGAAAACGTATTTATCAGCTGTACCG
GGCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024954XLOC_024954Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040891-exon-sc0002616-1575043694:16942..17078TCONS_00040891-exon-sc0002616-1575043694:16942..17078Clytia hemisphaericaexon
TCONS_00040891-exon-sc0002616-1575043694:2373..2602TCONS_00040891-exon-sc0002616-1575043694:2373..2602Clytia hemisphaericaexon
TCONS_00040891-exon-sc0002616-1510915933:16942..17078TCONS_00040891-exon-sc0002616-1510915933:16942..17078Clytia hemisphaericaexon
TCONS_00040891-exon-sc0002616-1510915933:2373..2602TCONS_00040891-exon-sc0002616-1510915933:2373..2602Clytia hemisphaericaexon
TCONS_00040891-exon-sc0002616-1491911889:16942..17078TCONS_00040891-exon-sc0002616-1491911889:16942..17078Clytia hemisphaericaexon
TCONS_00040891-exon-sc0002616-1491911889:2373..2602TCONS_00040891-exon-sc0002616-1491911889:2373..2602Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002616supercontigsc0002616:2373..17078 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.254239	0	1.18615	2.27207	1.60424	2.09369	6.24893	3.36011	6.05272	2.78466	1.1607	2.43133	0	1.3467	0.204913	0.917837	0	0.249776	0.974073	0.878681	0	0	0.413628	0	0	0.727524	0.192321	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040891 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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