TCONS_00040890 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040890
Unique NameTCONS_00040890
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1250

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040890 ID=TCONS_00040890|Name=TCONS_00040890|organism=Clytia hemisphaerica|type=transcript|length=1250bp
TAAAGGTTCGGAAACACAAGACCTTTTACAAGCATGGTTATGCTCATGTT
GCGATTTCCAACGAACTGTTTCAGCTGCTCAAGTTGTACGTTGACAAAGT
CCGTCCCACATTCAGCCGTCCTGATTCCGAAAACGTATTTATCAGCTGTA
CCGGGCGAGGCATGGAGTCTGGTGCCGTCAGCCGGAGGATTGACAAACTA
TGGAGAGAGTCGGGTGTGTATGGGGATAATACACCACCCAAGAAAAACTT
GGATGGTAACATCATCAGAAAATCAATGACATCAATGGTGCATGAAAATA
ACGACGAGGGAGAGAAACAAGCAGTGGCTGATTTGCTTGCTCATCGCAAA
ACCACGGCTGAAAATATATACCGTCAAAAGAAGATGGTTGATCAAGCCGT
AAAGGCCGCGGGAATTATCGAGAGAGTTTCCCACAAGAGaaAAACTGATC
AAGTGGACTTTGCAACAACGTCAAAAACGAGTGAAGTTAAGCCACCATCT
TCTCAAACGGAAGAAGTTACGCCCCCATCTTTTCAAACGAAAGAAATTAC
GCCCCCGTCTTCTCAAACGGAAGAAGTTTCGCCCCCATCTTTTCAAACGA
AAGAAATTACGCCCCCATCTTTTCAAACGGAagaaattacaaagaaaacg
aGTGAAGTTCCGCCACCATCTTCTAAAACGgaagaaattacaaaaaaggA
TGACGTTGAAGAAGACACTTATCCAGAAAAAGAAGTTAGCGAAATGAAAC
GTAGTCGAACCGTTCCTTCCGGAAAAGGGAAAACGAAATCATTTTCTACT
GAACAAACTGATTTATTGTATAAGATCACGAAAAAGATATATTTGGAGAA
TCTATCCATTAACGATGAAACAGCCAGGGTTGTCCTTGAGGAATCATCCG
AGGGGGAACAGTTTCTGAAAGATTATACGCTATATACCCTCGTGAATAAG
TTGAAATATGGACGAAgactttataaaaataataaactgTCTTTTTAGAT
GAACCTTCTTTGTATCACTAACTTGAATGCATGAAGTCATCGCGGACCTc
gttttaaaattataaaattattttttgtctttCGATTTTGTCAAACAAAC
TTTCACACACCCtgttctcacagacccactggaaaaattggccaaaatat
cgtccccggtggaaaactatactctaatttttgttctCACTGAAAAttat
cagataagcaaatccccaCTGCAGAGTATTGAGCTATTTTTTCATCCTCC
Run BLAST on NCBI

transcript from alignment at sc0002616:970..19104-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040890 ID=TCONS_00040890|Name=TCONS_00040890|organism=Clytia hemisphaerica|type=transcript|length=18135bp|location=Sequence derived from alignment at sc0002616:970..19104- (Clytia hemisphaerica)
TAAAGGTTCGGAAACACAAGACCTTTTACAAGCATGGTTATGCTCATGTT GCGATTTCCAACGAACTGTTTCAGCTGCTCAAGTTGTACGTTGACAAAGT CCGTCCCACATTCAGCCGTCCTGATTCCGAAAACGTATTTATCAGCTGTA CCGGGCGAGGCATGGAGTCTGGTGCCGTCAGCCGGAGGATTGACAAACTA TGGAGAGAGTCGGGTGTGTATGGGGATAATACACCACCCAAGAAAAACTT GGATGGTAACATCATCAGAAAATCAATGACATCAATGGTGCATGAAAATA ACGACGAGGGAGAGAAACAAGCAGTGGCTGATTTGCTTGCTCATCGCAAA ACCACGGCTGAAAATATATACCGTCAAAAGAAGATGGTTGATCAAGCCGT AAAGGCCGCGGGAATTATCGAGAGAGTTTCCCACAAGAGGTAAATGCTTT CATTGGTCTCATAAGGAACTTTCACGTTTGTGGATTCAGTGAAAACTTAT TCTGTGAAAAACATTACAGTATTTGTAGGTATTTGAAATATCTTTCTGGG ATTTGCGAGGAAAACGCGTGAGATTGCTGAAATTAAATCCACGTGAAATT TTTCAAGATTTTTTTCAGATTTTTGGCTCCAAATAGTACGTTTAAACATA AGCTACATTTGTTTAGACGTACTATTTAGATGGTCCCGTTGGCAGCGTTG GGGTGGTTACCGAATCAGTCCAGTTTGCTTATCTCTATTTTTTAACCTTA GAAAAACTGATCAAGTGGACTTTGCAACAACGTCAAAAACGAGTGAAGTT AAGCCACCATCTTCTCAAACGGAAGAAGTTACGCCCCCATCTTTTCAAAC GAAAGAAATTACGCCCCCATCTTCTCAAACGGAAGAAGTTTCGCCCCCAT CTTTTCAAACGAAAGAAATTACGCCCCCATCTTTTCAAACGGAAGAAATT ACAAAGAAAACGAGTGAAGTTCCGCCACCATCTTCTAAAACGGAAGAAAT TACAAAAAAGGATGACGTTGAAGAAGACACTTATCCAGAAAAAGAAGTTA GCGAAATGAAACGTAGTCGAACCGTTCCTTCCGGAAAAGGGAAAACGAAA TCATTTTCTACTGAACAAACTGATTTATTGTATAAGATCACGAAAAAGAT ATATTTGGAGAATCTATCCATTAACGATGAAACAGCCAGGGTTGTCCTTG AGGAATCATCCGAGGGGGAACAGTTTCTGAAAGATTATACGCTATATACC CTCGTGAATAAGTTGAAATATGGACGAAGACTTTATAAAAATAATAAACT GTCTTTTTAGATGAACCTTCTTTGTATCACTAACTTGAATGCATGAAGTC ATCGCGGACCTCGTTTTAAAATTATAAAATTATTTTTTGTCTTTCGATTT TGTCAAACAAACTTTCACACACCCTGTTCTCACAGACCCACTGGAAAAAT TGGCCAAAATATCGTCCCCGGTGGAAAACTATACTCTAATTTTTGTTCTC ACTGAAAATTATCAGATAAGCAAATCCCACTGCAGAGTATTGAGCTATTT TTTCATCCACCCCGAGTTTTCTGGCTAGAAAACATTGGAATCATAATCCA CACCTTTAAAAACACGAGAAAATCTATCCCCATCGAGCTCTGTTCCGTTA TTTTTATCCCCACTTGCTGATAAAATCCCACCGGGTCTGTGAGAAGGGGG TGTTTTCAAAAATAGAAACTTCAATCATTATTCATTGATCATTGGATTTT TCTCACCTGAAGCGTGGAGTCTTTTTGTCATTTGTTAGGACGTATAGTTT TTTTATAAGTTTGTAAAGGTATTAGTAACAATTCAACTTTTTATACTTTA TGTACAGTTTTAGATATTTGTACTATTTCTATATATCTATGGTGTCTCGC AAAAATATTCATATGATTTGTTTAGCTCTAGAGCAAACGCCCCACTCCCA CCCATCGAATTTTTGTTAAAGAAGAACTCTGTCAATTAAACGACTTTTGA TATTTTAGATTAAGAACAATAAAATCAAGAAAAACATGGAATCTTCACAA GCAAGAAAGGTCATTGAAATTTTGGAAAACATAAATGGTGATCCATCTCG AGGCGAGCTTAATATTGTCAGGAATTTCTTGCTGGCAAGAATTACCTTCG AAAATCCCAATAGGTAAGTGCTCTTCTTTCGTCTGGCTCTTCCTAGAAAA TGATGTAAGCGTTTATTTTTAGTTTATTTTCACTGACTTGATGCCCCTGT ACCAGTATCAGACCCACTTCACTTCTTAGGACAAGTTTCTTTCGCATTAT TACGCCCACTATCTTTCAAATACATTTATCGACTTTTTGCATAGTTCGAT TTAGACGTTTATTTATTTTTTGTTCATTTATATCTCCATAATAAGAAAAA AAGACGGGAATTTATTTTTGATCCGCTACGATACTAATAAGCGTCAATTT TGATTTCGTTTTAGAACTGGGGTATGCGCAAACATGACGATGAAGGAATA CGAAAACGTACTCACCAAGGACGATCACAAGGTAATAAAGGTTCGAAAAC ACAAAACCTTTGACAAGGATGGTTATGCTCATGTTGCGATTTCCAACGAA CTGTTTCAGCTTCTCAAGTTGTACGTTGACAAAGTCCGTCCCACATTCAG CCGTCCTGATTCCGAAAACGTATTTATTAGCTGTACCGGGCGCAGCATGG AATCCAGTGCTATTAGTCAGATAATCAATCGGACTCTCGGCGGAGCTCAT TAAATTTTTTTTTGTATTACTATAGTAACATTTTCCAAAAAAAATATTTT CCATCAAAGACACATTATTTTCGTTGATTATCTAACCATTATCAAAATAT CTTTAGCACGGCACGGTATTCTTCTTCCGGCCACAGTATGCCTCTTTTTT AGTATTAATCTTACTCTTAGGAGCCTGATAAACGAGACCCACTCTTTGTT NCTAACCATTATCAAAATATCTTTAGCACGGCACGGTATTCTTCTTCCGG TCACAGTATGCCTCTTTTTTGGTATTAATCTTACTCTTAGGAGCCTGATA AACGAGACCCACTCTTTGTTAATTTTAAAATAGTTTGGTACTAGTCACCA ATTAACTTATTTCGGGGGGGGTTAGAGGTACAATCCCCGACCCCTCTTTT ATTAATTTCCGTTTAATAAAATTTGAAGATTCTCTATCTCTAATCTATTT AACACCTGAGAGTAACCTAAATTATCCATAGAGAAGACCTTNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTAAT GTTATTATAATATGGGTAAAAGTACCCCTTTTTTAAACTGACTGAAATTC GAGCCGTTACTAGCAACCCTGCGGGGCCCAAGGCCCCGAGTATGCACCCT GCACAGTGACAAGCCGTTACTAGCAACCCTGACCCTACCTAATTGATTGG TAATGACCCAATACCCCCTGGACCACGGAATGACGGATAGGAAAAATTAA AAATGATACTTCCGACCGTCAAAATATGATACTTCTGGCCGTCGAAGATA CTTCCGTCCGTTCACGAAAAAAAAATTTGCGGGGCCTCATCCCCATTGGA AACTTTTGCAAAAATTTCGTCCCCTTTGGAAAAACTATCCTTAAATTTCA GCCCCATCGAGAAATTGACTTTGATTTCATCCCCATATTCGCAAAATTCA TTTTTTAGAAATTACACTCCGAAACCATCACCACTGGATTTTATAACCTT AGAACAATATAGAATCTTTGTCCACATTGAGTATTCAATNCTGGATTTTA TAACCTTAGAACAATATAGAATCTTTGTCCACATTGAGTATTCAATCGAA ATTTTTATCCCCGCTGTAGGAAAAAGTTTTAACGCGGCTGTGAGACAGGG GTGTCTTGGTGGACCTAAAAGGATAAGAATAAAGGAATCTATATGTGGTG CTGCAAAAACTGCAAAAAAGAAGTATATTTTCACGAGACGATTTTTCCAA AAATATTTTCATTTTAAATTTAATGTGACTAATCGCGGCCCATCTTTCAA TAGTCACTCCAGACTAACTACTCTTGTCNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGATGCGTCTGTACATATGTCGCAATTTT AGATTACAATCGTAGCAAATTTGAGACTTTTGTAGCATTTTGGGTCATAT GTAGCATTGTGACATTTGTAGCGCGGGACATTCGTAGCGCGGGACAACCA TATGTAGCGATGCTACATTTGTCTCGTTTGCCGCTACGAATGTCTCGTTC GCCGCTACGAATGTCTCAGTTTCATAGTGCGCGATTTCTTTCATAAGTTA TAAACTTCGCATATGGCGCCTTGTTGTTTAGCTCACATGTTAGCTGGTTC AAGGCAAGAATTGTATCTTCTTGCCTTCCTGACCTTCATTCAACAACGTT ATTCTCTTATCACATCATCATCACAGTTACCTGCAACTGCAACATGTCCA CGAAAGTCCATCAATTGCATTTCCTAAACAGAAGCATCGCTCCATATCCA ATTGTACCTGGCTTAAAAACCTTCATTGGCAGGTAGGGTTTCGTTTTGTT TTGATTTGGGTTGGAATCTCATTCTTTGGTGAATCAATTTTATTGGTTAG AAGTTTGGAAGTTAGAAGTTTTGCCCGGGTGATTTAAAACATTACATTAT AGCTGGTTAGTGTAAGGAGTACCTCTGATTCAGACCCCTGGATTCAGACC CAATCAATCGAACAATAATCGATTAAATCAAACTCAATCGAACAATTACA TAAAGTATGATTTTAAAAAATTAATCGAACCTAATCGAACACTCAAAATT TTTTAAGCAATGGGAGGAGTACCATTAGTTTGGTCAGTAAAAAGTTAGAT TAGTCCGATGAAATTAAATCCTCCTTGCCTCACTTGCAAAAACTATATTG TGGGCTACAGTGGCACGCGATATATACCATTTTGACAGTTCCCAGATATT TGTCTATATCTGGAATAAACTCCGTAGCCCCCCTATTTTTTTGATTTTGC GACGGGGTTTATAAATATATGTAGTTTTTAAACGTTCAATGGACCGGGGT ACCTAATAGCCGGGGTTTGGAATAAGCGGGGGGGTTGGAANNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATAGCCGGGGGGTTT GGAATAAGCGGGGGGGGTTGGAAAAAATTTCAAAACTTAATAAGCGGGAG GGTTGGAATAAAAATGTCCTGGGTGGAAAACTTTTGAAATGGAGGCTAAT ACAGCAGAATTAGGACAAAAGAGAGGGAGCTTTCAGAAACATTTTCCCAA AAATAAATAAGCGGGGGGGTTGGAATAAGAATGTCCTGGGTGGAAAATTT TCGAAAAATTAATTAGCGGGGGGACGGCTATTAGGTACCCGAGAGTATGC ATTTTTATGTCAACATACTAATTAAGAAGTAATTCAGAAATAAAACTTTA TCTCATATTTTCAGTTTTTGAAGGTCTATGCGCCTTTATCACAGCAATCC AATTTTATGTCCCGTACCGTGAGATCGGGTAACTTGCATCAGTGGAGGCT AACATGCATAACCTGGCTGGTCATTAAAATACAAATTAAATCAAAACAAA AATGGTAGAGTATAGCTGCCAGCAGAGCTGCGTAGTTCATTTGTTTTAAA ATTTTGCTGCTTTGATTCTTCAGTCATTTGATATGGCTATGCAAGTTTCC CTCCATTGATGCAAGTTACCCGACTTCACGGTACACAACAACTCCAATTA CACTGCTTCAAATATCAATGATGAGGAAAAAAATTCTGCCCAAAATTTGT TTTTTTTCCTTCAGGGGACCTATATATGTGTCATGTTTTTCAGACAGTTT ATCTGAAAAGAAATTATTTTTTTAACCAAACCGAGTGAAATAAAAATATT TTGTATTCTCTGAAGACATTGTTACGTATATGTATCAAAATGCACTAAAA GTTTTACCATACGTATCCTACTTTTTTGAGATATTTCACACTGTGTATTG CGTACCGGACAAAATTAGGATTTCCATTTGTCCCGTACACTACAAAATTT GAAAATCCTTAAATTTAACAAGGAATTCTATTTTGACCAAACCTTTTGCA TTGATTGGCAAATCTATACCTTGTTAACCGGTTATTTTTTCGTAGCGGGC TACACAGCTACACTGTCCAGAGTTGCCCGTCGTTAGGAAAATTCATTGTG ATGTCACTTTTTCAAAAGAAAATTAACAATACGTTGATATATATCATTTA TAACAATTTTTTATCTCTTTTTGCTTTATTTTGCTATTTTTCCTGGATAA AGCGCTGAAAATCAATCGAAGCTGAAGGAAACGGTTAACAAATAATGACC GGTTTCTTTCGGGCTGTACTGAAAATATTGCCCTCGGTCAACGCAACAAC CTCGCAAGCTCGCTCATTATTTGACCTTGGGCTGCCTTGGGCAATATTTC TCAGTACAGCCCTCACTAACCGGTCATTATTATATTAATATTGCTTTTTT AGATATCCAAGTTAGTTGTATAAAGTTGTATAAATGAAAGTTATCGAGGG TCATAAGAGTGATTTTCCCCCTATTCAAGTACAATAGTGTATACCACAAA TACCCCATTGACTCTGATAGACCTACAGTATTTTATAATAAAAAAGTTAA GTTTTTCTGAAAGTCAATTAATATTTTGTTTATTTTGAAATTGTTTGATG GAGTTCGATTAGCTTGATTGTTCGATTGGTTCGATAAGTTCTATTGATCG GGTCTGGTCTGATATTTACAACAATTAATCAAACAGGTCGATTTATGAAA TTAGTTGAACTTTTTCAAAATTAATCGAACAACAAAAAAAGTGCAATTAA ATTCTCTAATTGAACTATTTAAAAGTCACTAAAGACATTAAAGTTCAAAA AAGTTTGTCGACAACAAGAAATGTTCAACAAATTTAATTTTTAAGGTTGC TATCCACTCTACGAACAAGAGAGGTAAGACTACCAAGCAAGACTTATAAC CAGCATGAGATTAAAAAATTTTGTGTTTACTTACAAATCTTCCTAATTTT CCAAAGCTCATTTCTCAATTACCAGGAGTCCTGGTATTATGCATAACAAC AGTATCAGTATATCATGAGTTAGTTTTGGAGTCATTTCAATGTTTTTGTT CCTAATTTTTGGAAACAAAATGGTATTGTGATTAGGAAAAGGTCTATTTT ATGCTGCTTTTCTAGTGATCATAAAAATTTCAGGTTTTTATGGAAAAAAT GTTCTTGAAAATTTTGATTGCTGGTGAAAATTTATTTAAGCTACCTGCAT TTTGTTGAATTGAAGTTTGGAAACTTATTGCTAGGAAACTTTACTTTTAG CACTTTTCTGAGATCTTCTGGCTGCTTTTTTCAGCTTTTATCTGATACAT ACACAGCCAACAAAATAAAGGCCTAGAAAATACCCTGTGCCCTGCCAGGA AAGTCATGGGGGCTGGGTACGTGCAGACGGTAAGGGTTGGTTTTTTCGTT ATGTATGTCAACAACTGTGTAGACTGTAGACAGGACCTTTTAACCTTATG ACTGACCGCCCAACAAATTGAAGTTACTTTTTCAGGAATGAGGAAGTCTT AGCCAACATACCGTTTACCTTAAGAGAACATTTTTGGCAGATTAGTTCTT TGCAAAAAATCAAGATTTACATGATATTAAAAAATAACCTCTTATAACCA ATATTGGTCTAAAACACCCATTTTTAGGCAAAATAGAAAAAATTTAGTTC TTGCTTTGTAGAATTATAATCTTACTAACATCCGTGCCAAATTAAATTTT TAATTTCATTTTGCCAAAATTAGTACCCCTTAAGGTATTCCAATAATGTT GTTTGATGTTTGTTTTTTCTGGATCCGAATGAAGAGATTTGGAAACNAAA TAATCTTACTAACACCCCTGCCAAATTAAATTTTTAATTTCATTTTGCCA AAATTAGTACCCCTTAAGGTATTCCAATAATGTTGTTTGATGTTTGTTTT TCTGGATCCGAATGAAGAGATTTGGAAACTTATGACAGCTTTAGAATGCT TTATACTGCTATTAGACAATTCTACTGTTCAAAAAAGNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNAGGGTGCGCACTCGTCGGGATTTTTAGCGTGGAACAAGTCGA AAATCAAAATTAGAACATTCCATCCATCATAACTTATCCTTAACAACTCC AAACTTCTTCATTCTTTTTTTTTTAATACTCAGAATTTATCACAGAAAAC AAAGAAACAAACCCCTACCTTTAATAAAAAGATATACCATTTATTAGACA TCAAGGTGAAAAAATGGCAACTCGGAATTCCTGGCACCACCGTCCACCTT GACCACCATTTTTAAAATGGCTATTGCTATTGAGCTGGATTAGTTATAGA CTCCTGTTTTTTTTTATAAAACGCGGGAAAGATAGTACCTTAGTTTGTCA CGTGGTAGCCTTTTCGATAATCTACGGGTCGTCTTTAAATCAAGAAAAAA GAAGAAATTTCGATTTTTCGGCACTTTCCTGAAATTTTTATCAGGACTAC CATATATCCATATATCGTTGGAAAGCTAAGGGTTTCAGGTTTTCATTGGT AAAATTTGTTTTTAGCTATCATTTCCAGCTCATTAGCGATAGGCTAAAGT TTAACAGTCATCGGGCGGATTTTCAGACCGCGCCAGCAAAACTCCTCACG CCCCGCCACACGGAAGACTAGATTTCATCCGCCATTTTTGGCGCGATTTT GGTGCTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATG ACCCCTCATTTTTCTCACAAAGGTAAGGACTTTCAAATAAAATTAGTTTG GTTTTCAAAATTTGAGGGGAAAATTTTGGCCTGACCACCCTAACATCAGC TTAGGTTATTTTTCATTCAATTTTTACCATGTATATTTCAGTCGTTAGCT AACTTTTTAAATTTTTATCAAAAACTATGTTTGTTTATTTACTGTTAAGA GCCATTTTTTTTAAGAGTCTTCAGGGTGTGATACCTCATCCTCTTGGATT TTGATGAAATTTTGACCAAATGATCCATCACACAAGAAAATAAGACCCTG AAAATTTCACCTTGATATCTCAAGTAGTTTTGAAGATACAGAGTCTCAAA GATAGGCTGCTAAGCGGAAATTGACCCCTAAAAATCATGAACTCTGGTGG GGAGCAGATTTTGAAAGCCAATGAATTTTTATTCAAGTACATTAGAAAGC TGATTTACAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATGTAAAAAAATGGGACT GACATCTGGCCTTTCCTACCATTCCAGGGCCTATATTTTCAGGAAAAGGC TCAACCTTTCACAGTTTGGTAACTATTATTCCTAAATATAAGCAGGTTAC TTCAACTAAATGGGTTTAACAGTACTTAATTCCTATTCAAAAACTTTTTA GACTCATTCAGAAATCCTACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG TGTGATGGATCATTTGGTCAAAATTTCATCAAAATCTAAGAGGGTGAGGT ATCACACTTTCTTTATTCTGAAGATTTTTAAAAAAAATGGCTCTTAAGTT TGTTGTCTCTTTTGGTTGTCAAACTTTAATTAAATACTCACAAATTTTTC AAATATAAAGTTCGATTTTAAAGAAATCAAACAGCCAAACAGTACGACCC TCGACATGGCCCGAGAATTATCGGGCCTCTTCGGGCCATGTTCGGGCTGA GAGACCCTATCAATTCTTTTGGCCCGAACTTGACCCGAATCATTCGGGCC ACGTTCGGGCTATGACTATATAATACAAAATATAATACAAAATCTTAAAA AGTATGGTTCATGGGTTAATGCTGTAAAAACCCATCAATAAGTCAGCATC ACCAGGGTTGCGATCAACCTGCGCTTTCCTGAAGCGAAAAGTTCATGGGT AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTAAATTTCCATGTGGCGAGTGTTACAAAGCTGTGAAA TGGGGTCAAAGAGCAATAGCATGTGACTCGTGTGACCAATGGTTCCACAA AGATTGTATTGAAATGGACAGTCTTATCTACCAAGCTTATGAATCAACTC CTGATCTCACCTGGGAATGTTGCAACTGTGGTATCAAAAATATCAGCCCA TCATTATTCGACAAAACCCTCAACTCCTCAACTGATTCAAACATCTCTAA TGCCAGCGATAACACACCAAAGCTATTAGCCAAACAACTCCGTATCTTAC GCATAAACTTTTGTAGTATCTGGGACAAGAAAGAACTCCTTGAAGATGCG CTATTCGATGATAACATTGATGTTATCATTGGATCTGAAACNNNNNNNNN NNNNNATTGTCTTGCTATGTGTATCTTTGTTTAGTATTTTTTTGATAATA TTTTGACATGAAAAGGATACTTTAATTTCGAAATTCTTTAACTCTTGATT ATCTTTCTTCCTTTCTAAAAGACCTAAACAAAGTGTATATATTAGGAGTG GTGTTATCTTTCTTGACTCGTGAAAACAGTATGATCTTTACAGGCTTCTC ATTGCAGTATACACGTTATCATACAAGGTTTGATGCCATATTCTTTATTA ATTGGAAACTGAAATCCTTGACATAATGACGTAATCTTGACCATATATCA TNATTAATTGGAAACTGAAATCCTTGACATAATGACGTAATCTTGACCAT ATATCATGGACGATTCTGATTGTCATCTCCATTTAGAATTTTGACCGTAC ATGATTAAAATTGCTTTTTCCATACCACTGGACAATATACCTTCCACCCC TATGAACTTTTTTTCTGGAAGAGCCCAATGTTATAAAATGGGGAAAGGGG TCTCTAAGTATCATTGGAAAATCTCCCACAGAGAGAATGCCTACAGAAGA GCACAAGCTAGTAATTTTGCCCTTCTCCTTTGACCATACGCTGAAAATCA TTTCATTCCTGACTTTCTCGATGTCATGATCAATAGTGAGGGATGAATTA AGAAAAAACGTGAAGGGCTACAGGAGAATCTTCAAACCTTTAATTTTAGA GTAGCAATCATGACAACGATTGAATGTAATGGTTTTCTTTGTTCGCAAAT GATACATTCTTTTGAAATTTGGCGTTAGATTCAACTTACAATTAATTTCT ATTTCTAATTGATTTCGTATTCTTTGTGAAAACAATACGGGTCGCAGTTG TTCGATAATTGACTTTATTTCTCATCCAAGAAATTCTTCTTTAGCCCCTA CGGTAGTTTAACCCTTTAAGTGCCAATGTCGTATATATGAGATATTTGAC CATTTTTGGTCAACGAGTGATCCAAGAACCTCCAAATGTGGCCCTGATTA ACTTGATTCAGTCCTCCAGCAAATTAGTTTGAAGTTTAACCACTCGGCAC CTTTCTATCATTCCGTCAGGTCCGCACAGCGGGCTATAAACGAGCTTCTT ACTCCTTCTAGATCCGGAGATATAAGCCTTTAAAGTTTGAACTAGCGATT TTCTTTAAAAAACTTGGGAAAAAATTACCGTGGCACTTAAAGGGTTAAGC ACACATTTATAAAATTGTAACACGTTATTTTTCTCTCCAGAAACGACAAA AAAGACCTTGTCCGGTGTGTAAAGCTCCATTGACTGGCCTTCCAAGGCAT ATGAGGGATGTCCATGAATGGAGCTGGAAAAAGTCTGCCAAAGTCAACAG TCTCTTTAAATCAAGGCAACCGTATACAAAGAAGGACGGTCAATCAACAA GCGAACAGTCTGCGAAACGAAAAGGGAAACGCTGCCCCATGGAAGGATGC TTTTTCGTCGGTATTCAGGTGGGGAGACACCTCCGTAAGGAACACTGTAT GAAATTTGATGATGAAAATTATAAGGATGCACTCAAGGCAGCCCGTGTCC ATGAGCCTTTGACGTCCGAAAACATCCAAAAGAATCGCCGGGCTGTTGCC AGAGAGTTTGAACTTGCTGAGAACATCCAGGAATATGAAAAAGAAGTTGA GAGTGGTACCGGAAGGAGGTCTGAAGAGAAAGTTATTGATTATGCAATGA TTATGTTCGAAAGGTACTTGATTTCGGTTGAAGGAAATTTCCGTGATAAG AGATCAGCTAAACAATGCGTCCAAGAAGTGAAAACGGTTGCTCTCCATCT TGGATCTCTTGTTGCCCTATTCGACAAAAAGAAGGTCAGAGATGGGTTCT TCCAATCGTACTTAGACCCAAAGTCCAAACCAAGCACATCGAAACACTAC CTAACGTCATTGATTTCGTTCATGGGCTTCGTTATCACTGAAGGTCTCGA GAGTCTCGCAGACATCGTAAATCAAGACGACGTGGTTGCCATGAAACTTA GACTTGGTAATTGGAGGAAGGCTTATGGGAAAAAGCAAGATGTTTTACGT TGGGAGAGGGACGACGAAATCAACGAAGTTCTTGTGACACTCGATCAGAT TAAAACTTTTGAAGAAAGCGAACAAGCTATCAACGCAATCACGATCTTGG AACAAGAGACTGATCTTCTTCCCTCAAGAAATGAATTTCTAACCGTCCGT GACTATCTCTTTGCAAGAATTGCTTTGGCTAATGCCCACCGGTAAGCACA TTTTTCATTTTAAGATGTCATTTTGGCGGTATCAGGATGTTTTGACCAAA ACCTGCCCTCGGACAATGAAATGTTCTCGTATGCCTTATATGTACGGCGC CGTCTGGTGATTTTTACTTCTTTCCAACCCCGTCGATTTTATCATAACCT CCATTTGTTCATTTTGGAAATAATTTTAGCTGTTAAATAAAAGTTCCCTG TTTTCACAGGTTTTAATATTCATCTTATTTTATTGTGGATAGAGGTTTTC CATATTTTGTTAAATATGTAGCATCTGTCATTATGAAAACAAACGTTCGA TTTTTGTAAAGGATCGTATTGACAGATTCGAAGGTTTGCCTTCATAATGG CGGAATATACGTAATTTAACAAAACGAAATGAATCAACTGAAAAATCTTT CAGAAGAATTGTTGCTAACCCCAAGCCACCTTGATATTTGATTTCGTTTT AGAACTGGGGTATGCGCAAACATGACGATGAAGGAATACGAAAACGTACT CACCAAGGACGATCACAAGGTGATAAAGGTTCGGAAACACAAAACGTTTT ACAAGCATGGTTATGCTCATGTTGCGATTTCCAACGAACTGTTTCAGCTG CTCAAGTTGTACGTTGACAAAGTTCGTCCCACATTCAGCCGTCCTGATTC CGAAAACGTATTTATCAGCTGTACCGGGCGAGGCATGGAGTCTGGTGCCG TCAGCCGGAGGATTGACAAACTATGGAGAGAGTCGGGTGTGTATGGGGAT AATACACCACCCAAGAAAAACTTGGATGGTAACATCATCAGAAAATCAAT GACATCAATGGTGCATGAAAATAACGACGAGGGAGAGAAACAAGCAGTGG CTGATTTGCTTGCTCATCGCAAAACCACGGCTGAAAATATATACCGTCAA AAGAAGATGGTTGATCAAGCCGTAAAGGCCGCGGGAATTATCGAGAGAGT TTCCCACAAGAGGTAAATGCTTTCATTGGTCTCATAAGGAACTTTCACGT TTGTGGATTCAGTGAAAACTTATTCTGTGAAAAACATTACAGTATTTGTA GGTATTTGAAATATCTTTCTGGGATTTGCGAGGAAAACGCGTGAGATTGC TGAAATTAAATCCACGTGAAATTTTTCAAGATTTTTTTCAGATTTTTGGC TCCAAATAGTACGTTTAAACATAAGCTACATTTGTTTAGACGTACTATTT AGATGGTCCCGTTGGCAGCGTTGGGGTGGTTACCGAATCAGTCCAGTTTG CTTATCTCTATTTTTTAACCTTAGAAAAACTGATCAAGTGGACTTTGCAA CAACGTCAAAAACGAGTGAAGTTAAGCCACCATCTTCTCAAACGGAAGAA GTTACGCCCCCATCTTTTCAAACGAAAGAAATTACGCCCCCGTCTTCTCA AACGGAAGAAGTTTCGCCCCCATCTTTTCAAACGAAAGAAATTACGCCCC CATCTTTTCAAACGGAAGAAATTACAAAGAAAACGAGTGAAGTTCCGCCA CCATCTTCTAAAACGGAAGAAATTACAAAAAAGGATGACGTTGAAGAAGA CACTTATCCAGAAAAAGAAGTTAGCGAAATGAAACGTAGTCGAACCGTTC CTTCCGGAAAAGGGAAAACGAAATCATTTTCTACTGAACAAACTGATTTA TTGTATAAGATCACGAAAAAGATATATTTGGAGAATCTATCCATTAACGA TGAAACAGCCAGGGTTGTCCTTGAGGAATCATCCGAGGGGGAACAGTTTC TGAAAGATTATACGCTATATACCCTCGTGAATAAGTTGAAATATGGACGA AGACTTTATAAAAATAATAAACTGTCTTTTTAGATGAACCTTCTTTGTAT CACTAACTTGAATGCATGAAGTCATCGCGGACCTCGTTTTAAAATTATAA AATTATTTTTTGTCTTTCGATTTTGTCAAACAAACTTTCACACACCCTGT TCTCACAGACCCACTGGAAAAATTGGCCAAAATATCGTCCCCGGTGGAAA ACTATACTCTAATTTTTGTTCTCACTGAAAATTATCAGATAAGCAAATCC CCACTGCAGAGTATTGAGCTATTTTTTCATCCTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024954XLOC_024954Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040890-exon-sc0002616-1575043694:18666..19104TCONS_00040890-exon-sc0002616-1575043694:18666..19104Clytia hemisphaericaexon
TCONS_00040890-exon-sc0002616-1575043694:970..1780TCONS_00040890-exon-sc0002616-1575043694:970..1780Clytia hemisphaericaexon
TCONS_00040890-exon-sc0002616-1510915933:18666..19104TCONS_00040890-exon-sc0002616-1510915933:18666..19104Clytia hemisphaericaexon
TCONS_00040890-exon-sc0002616-1510915933:970..1780TCONS_00040890-exon-sc0002616-1510915933:970..1780Clytia hemisphaericaexon
TCONS_00040890-exon-sc0002616-1491911889:18666..19104TCONS_00040890-exon-sc0002616-1491911889:18666..19104Clytia hemisphaericaexon
TCONS_00040890-exon-sc0002616-1491911889:970..1780TCONS_00040890-exon-sc0002616-1491911889:970..1780Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002616supercontigsc0002616:970..19104 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.115129 0.951668 1.04444 0.419956 1.77823 0.727621 2.86604e-09 0 0 0 0 0.0528682 0.0779246 0 0 0.125269 0 0 0.412032 0 0.135518 8.80291e-09 0.00501916 0.526742 0.62977 0.171446 0.192697
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040890 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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