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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040887 ID=TCONS_00040887|Name=TCONS_00040887|organism=Clytia hemisphaerica|type=transcript|length=483bp
CCGCGGCCTTTACGGCTTGATCAACCATCTTCTTTTGACGGTATATATTT
TCAGCCGTGGTTTTGCGATGAGCAAGCAAATCAGCCACTGCTTGTTTCTC
TCCCTCGTCGTTATTTTCATGCACCATTGATGTCATTGATTTTCTGATGA
TGTTACCATCCAAGTTTTTCTTGGGTGGTGTATTATCCCCATACACACCC
GACTCTCTCCATAGTTTGTCAATCCTCCGGCTGACGGCACCAGACTCCAT
GCCTCGCCCGGTACAGCTGATAAATACGTTTTCGGAATCAGGACGGCTGA
ATGTGGGACGAACTTTGTCAACGTACAACTTGAGCAGCTGAAACAGTTCG
TTGGAAATCGCAACATGAGCATAACCATCCTTGTCAAAGGTTTTGTGTTT
TCGAACCTTTATTACCTTGTGATCGTCCTTGGTGAGTACGTTTTCGTATT
CCTTCATCGTCATGTTTGCGCATACCCCAGTTC Run BLAST on NCBI transcript from alignment at sc0002616:2121..16641+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040887 ID=TCONS_00040887|Name=TCONS_00040887|organism=Clytia hemisphaerica|type=transcript|length=14521bp|location=Sequence derived from alignment at sc0002616:2121..16641+ (Clytia hemisphaerica)
CCGCGGCCTTTACGGCTTGATCAACCATCTTCTTTTGACGGTATATATTT
TCAGCCGTGGTTTTGCGATGAGCAAGCAAATCAGCCACTGCTTGTTTCTC
TCCCTCGTCGTTATTTTCATGCACCATTGATGTCATTGATTTTCTGATGA
TGTTACCATCCAAGTTTTTCTTGGGTGGTGTATTATCCCCATACACACCC
GACTCTCTCCATAGTTTGTCAATCCTCCGGCTGACGGCACCAGACTCCAT
GCCTCGCCCGGTACAGCTGATAAATACGTTTTCGGAATCAGGACGGCTGA
ATGTGGGACGAACTTTGTCAACGTACAACTTGAGCAGCTGAAACAGTTCG
TTGGAAATCGCAACATGAGCATAACCATGCTTGTAAAACGTTTTGTGTTT
CCGAACCTTTATCACCTTGTGATCGTCCTTGGTGAGTACGTTTTCGTATT
CCTTCATCGTCATGTTTGCGCATACCCCAGTTCTAAAACGAAATCAAATA
TCAAGGTGGCTTGGGGTTAGCAACAATTCTTCTGAAAGATTTTTCAGTTG
ATTCATTTCGTTTTGTTAAATTACGTATATTCCGCCATTATGAAGGCAAA
CCTTCGAATCTGTCAATACGATCCTTTACAAAAATCGAAcgtttgttttc
ataatgacaGATGCTACATATTTAACAAAATATGGAAAACCTCTATCCAC
AATAAAATAAGATGAATATTAAAACCTGTGAAAACAGGGAACTTTTATTT
AACAGCTaaaattatttccaaaatgAACAAATGGAGGTTATGATAAAATC
GACGGGGTTGGAAAGAAGTAAAAATCACCAGACGGCGCCGTACATATAAG
GCATACGAGAACATTTCATTGTCCGAGGGCAGGTTTTGGTCAAAACATCC
TGATACCGCCAAAATGAcatcttaaaatgaaaaatgtgcTTACCGGTGGG
CATTAGCCAAAGCAATTCTTGCAAAGAGATAGTCACGGACGGTTAGAAAT
TCATTTCTTGAGGGAAGAAGATCAGTCTCTTGTTCCAAGATCGTGATTGC
GTTGATAGCTTGTTCgctttcttcaaaagttttaaTCTGATCGAGTGTCA
CAAGAACTTCGTTGATTTCGTCGTCCCTCTCCCAACGTAAAACATCTTGC
TTTTTCCCATAAGCCTTCCTCCAATTACCAAGTCTAAGTTTCATGGCAAC
CACGTCGTCTTGATTTACGATGTCTGCGAGACTCTCGAGACCTTCAGTGA
TAACGAAGCCCATGAACGAAATCAATGACGTTAGGTAGTGTTTCGATGTG
CTTGGTTTGGACTTTGGGTCTAAGTACGATTGGAAGAACCCATCTCTGAC
CTTCTTTTTGTCGAATAGGGCAACAAGAGATCCAAGATGGAGAGCAACCG
TTTTCACTTCTTGGACGCATTGTTTAGCTGATCTCTTATCACGGAAATTT
CCTTCAACCGAAATCAAGTACCTTTCGAACATAATCATTGCATAATCAAT
AACTTTCTCTTCAGACCTCCTTCCGGTACCACTCTCAACTTCTTTTTCAT
ATTCCTGGATGTTCTCAGCAAGTTCAAACTCTCTGGCAACAGCCCGGCGA
TTCTTTTGGATGTTTTCGGACGTCAAAGGCTCATGGACACGGGCTGCCTT
GAGTGCATCCTTATAATTTTCATCATCAAATTTCATACAGTGTTCCTTAC
GGAGGTGTCTCCCCACCTGAATACCGACGAAAAAGCATCCTTCCATGGGG
CAGCGTTTCCCTTTTCGTTTCGCAGACTGTTCGCTTGTTGATTGACCGTC
CTTCTTTGTATACGGTTGCCTTGATTTAAAGAGACTGTTGACTTTGGCAG
ACTTTTTCCAGCTCCATTCATGGACATCCCTCATATGCCTTGGAAGGCCA
GTCAATGGAGCTTTACACACCGGACAAGGTCTTTTTTGTCGTTTCTGGAG
AGAAAAATAACGTGTTACAATTTTATAAATGTGtgcttaaccctttaagt
gccacggtaaTTTTTTCccaagttttttaaagaaaatcgctagttcaaac
tttaaaggcttatatctccggatctagaaggagtaaGAAGCTCGTTTATA
GCCCGCTGTGCGGACCTGAcggaatgatagaaaggtgccgagtggttaaa
cttcaaactaattTGCTGGAGGACTGAATCAAGTTAATCAGGGCCacatt
tggaggttcttggatcactcgttgaccaaaaatggtcaaatatctcatat
atacgacattggcacttaaagggttaaactaCCGTAGGGGCTAAAGAAGA
ATTTCTTGGATGAGAAATAAAGTCAATTATCGAACAACTGCGACCCGTAT
TGTTTTCACAAAGAATACGAAATCaattagaaatagaaattaaTTGTAAG
TTGAATCTAAcgccaaatttcaaaagaatgtaTCATTTGCGAACAAAGAA
AACCATTACATTCAATCGTTGTCATGATTGCTACTCTAAAATTAAAGGTT
TGAAGATTCTCCTGTAGCCCTTCACGTTTTTTCTTAATTCATCCCTCACT
ATTGATCATGACATCGAGAAAGTCAGGAATGAAATGATTTTCAGCGTATG
GTCAAAGGAGAAGGGCAAAATTACTAGCTTGTGCTCTTCTGTAGGCATTC
TCTCTGTGGGAGATTTTCCAATGATACTTAGAGACCCCTTTCCCCATTTT
AtaacattgggctcttccagaaaaaaagttcATAGGGGTGGAAGGTATAT
TGTCCAGTGGTATGGAAAAAGCAATTTTAATCATGTACGGTCAAAATTCT
AAATGGAGATGACAATCAGAATCGTCCATGATATAtggtcaagattacgt
cattatgTCAAGGATTTCAGTTTCCAATTAATNATGATATAtggtcaaga
ttacgtcattatgTCAAGGATTTCAGTTTCCAATTAATAAAGAATATGGC
ATCAAACCTTGTATGATAACGTGTATACTGCAATGAGAAGCCTGTAAAGA
TCATACTGTTTTCACGAGTCAAGAAAGATAACACCACTCCTAATATATAC
ACTTTGTTTAGGTCTTTTAGAAAGGAAGAAAGATAATCAAGAGTTAAAGA
ATTTCGAAATTAAAGTATCCTTTTCATgtcaaaatattatcaaaaaaata
cTAAACAAAGATACACATAGCAAGACAATNNNNNNNNNNNNNNGTTTCAG
ATCCAATGATAACATCAATGTTATCATCGAATAGCGCATCTTCAAGGAGT
TCTTTCTTGTCCCAGATACTACAAAAGTTTATGCGTAAGATACGGAGTTG
TTTGGCTAATAGCTTTGGTGTGTTATCGCTGGCATTAGAGATGTTTGAAT
CAGTTGAGGAGTTGAGGGTTTTGTCGAATAATGATGGGCTGATATTTTTG
ATACCACAGTTGCAACATTCCCAGGTGAGATCAGGAGTTGATTCATAAGC
TTGGTAGATAAGACTGTCCATTTCAATACAATCTTTGTGGAACCATTGGT
CACACGAGTCACATGCTATTGCTCTTTGACCCCATTTCACAGCTTTGTAA
CACTCGCCACATGGAAATTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACCCATGAACTTTTCG
CTTCAGGAAAGCGCAGGTTGATCGCAACCCTGGTGATGCTGACTTATTGA
TGGGTTTTTACAGCATTAACCCATGAACCatactttttaagattttgtat
TATATTTTGTATTATATAGTCATAGCCCGAACGTGGCCCGAATGATTCGG
GTcaagttcgggccaaaagaattgatagggtctctcagcccgaacatggc
ccgaagaggcccgataattctcgggccatgtcgagggtcgtactGTTTGG
CTGTTTGATTTCTTTAAAATCGAactttatatttgaaaaatttgtgagta
tttaaTTAAAGTTTGACAACCAAAAGAGACAACAaacttaagagccattt
tttttaaaaatcttcagaataaagaaagtgtgatacctcaccctcttaga
ttttgatgaaattttgaccaaatgatccatcacacNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNaaagtaggatttctgaatgagtctaaaaagtttttgaat
aggaattaagtactgttaaacccatttagttgaagtaacctgcttatatt
tagGAATAATAGttaccaaactgtgaaaggttgagccttttcctgaaaat
ataggccctggaatggtaggaaaggccagatgtcagtcccatttttttac
atattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNactgtaaatcagctttctaatgtactt
gaataaaaattcattggctttcaaaatctgctccccaccagagttcatga
tttttaggggtcaatttccGCTTAgcagcctatctttgagactctgtatc
ttcaaaactacttgagatatcaaggtgaaattttcagggtcttattttct
tgtgtgatggatcatttggtcaaaatttcatcaaaatccaagaggatgag
gtatcacaccctgaagactcttaaaaaaaatggctcttaacagtaaataa
acaaacatagtttttgataaaaatttaaaaagttagcTAACGACTGAAAT
ATACATGgtaaaaattgaatgaaaaataacCTAAGCTGATGTTAGGGtgg
tcaggccaaaattttcccctcaaattttgaaaaccaaactaattttattt
gaaagtccttacctttgtgagaaaaatgaggggtcattNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNggaagcaccaaaatcgcgccaaaaa
tggcggatgaaatctagtcttccgtgtggcggggcgtgaggagttttgct
ggcgcggtctgaaaatccgcccgatgactgttaaactttagcctatcgct
aatgagctggaaatgatagctaaaaacaaattttaccaatgaaaacctga
aacccttagctttccaacgatatatggaTATATGGTAgtcctgataaaaa
tttcaggaaagtgccgaaaaatcgaaatttcttcttttttcttgatttaa
agACGACCCGTAGATTATCGAAAAGGCTACCACGTGACAAACTAAGGTAC
tatctttcccgcgttttataaaaaaaaacaggagtCTATAACTAATCCAG
CTCAATAGCAATAGCCATTTTaaaaatggtggtcaaggtGGACGGTGGTG
CCAGGAATTCCGAGTTgccattttttcaccttgatgtctaataaatggta
tatctttttattaaaGGTAGGGgtttgtttctttgttttctgtgataaat
tctgagtattaaaaaaaaaagaatgaagaagtttggagttgttaaggata
agttatgatggatggaatgttctaattttgattttcgacttgtTCCACGc
taaaaatcccgacgagtgcgcaccctNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTT
TTTTGAACAGTAGAATTGTCTAATAGCAGTATAAAGCATTCTAAAGCTGT
CATAAGTTTCCAAATCTCTTCATTCGGATCCAGAAAAACAAACATCAAAC
AACATTATTGGAATACCTTAAGGGgtactaattttggcaaaatgaaatta
aaaatttaatttggcagggGTGTTAGTAAGATTATTTNGTTTCCAAATCT
CTTCATTCGGATCCAGAAAAAACAAACATCAAACAACATTATTGGAATAC
CTTAAGGGgtactaattttggcaaaatgaaattaaaaatttaatttggca
cgGATGTTAGTAAGATTATAATTCTACAAAGCAAGAActaaattttttct
attttgcctaaaaatgggtGTTTTAGACCAATATTGGTTATAAGAGGTTA
TTTTTTAATATCATgtaaatcttgattttttgcaAAGAACTAATCTGCCA
AAAATGTTCTCTTAAGGTAAACGGTATGTTGGCTAAGACTTCCTCATTCC
TGAAAAAGTAACTTCAATTTGTTGGGCGGTCAGTCATAAGGTTAAAAGGT
CCTGTCTACAGTCTACACAGTTGTTGACATACATAACGAAAAAACCAACC
CTTACCGTCTGCACGTACCCAGCCCCCATGACTTTCCTGGCAGGGCACAG
GGTATTTTCTAGGCCTTTATTTTGTTGGCTGTGTATGTATCAGATAAAAG
CTGAAAAAAGCAGCCAGAAGATCTCAGAAAAGTGCTAAAAGTAAAGTTTC
CTAGCAATAAGTTTCCAAACTTCAATTCAACAAAATGCAGGTAgcttaaa
taaattttcaccagcaatcaaaattttcaagaacattttttccataaaaa
cctgaaatttttATGATCACTAGAAAAGCAGcataaaatagaccttttcc
taATCACAATACCATTTTGTTTCCAAAAATTaggaacaaaaacattgaaa
tgacTCCAAAACTAACTCATGATATACTGATACTGTTGTTATGCATAATA
CCAGGACTCCTGGTAATTGAGAAATGAGCTTTGGAAAATTAGGAAGATTT
GTAAGtaaacacaaaattttttaatCTCATGCTGGTTATAAGTCTTGCTT
GGTAGTCTTACCTCTCTTGTTCGTAGAGTGGATAGCAaccttaaaaatta
aatttgttgaACATTTCTTGTTGTCGACAAACTTTTTTGAACTTTAATGT
CTTTAGTGACTTTTAAATAGTTCAATTAGagaatttaattgcactttttt
tgttgttcgattaattttgaaaaagttcaacTAATTTCATAAATCGACCT
GTTTGATTAATTGTTGTAAATATCagaccagacccgatcaatagAACtta
tcgaaccaatcgaacaatcaagctaatcgaactccatcaaacaatttcaa
aataaacaaaatattaattgactttcagaaaaacttaacttttttattat
aaaatacTGTAGGTCTATCAGAGTCAATGGGGTATTTGTGGTATACACTA
TTGTACTTGAATAGGGGGAAAATCACTCTTATGACCCTCGATAACTTTCA
TTTATACAACTTTATACAACTAACTTGGATATCTAAAAAAGCAATATTAA
TataataatgaccggttagtgagggctgtactgagaaatattgcccaaGG
CAGCCCAAGGTCAAATAATGagcgagcttgcgaggttgttgcgttgaccg
agggcaatattttcagtacagcccgaaagaaaccggtcattatttgttaa
ccgtttccttcagcttcgattgattttcagcgctttatccaggaaaaata
gcaaaataaagcaaaaagagataaaaaattgttataaatgATATATATCA
ACGTATtgttaattttcttttgaaaaagtgacatcacaatgaattttcct
aacgacgggcaactctggacagtgTAGCTGTGTAGCCCGCTACGAAAAAA
TAACCGGTTAACAAGGTATAGATTTGCCAATCAATGCAAAAGGTTTGGTC
AAAATAGAATTCCTTGTTAAATTTaaggattttcaaattttgtagtGTAC
GGGACAAATGGAAATCCTAATTTTGTCCGGTACGCAATACACAGTgtgaa
atatctcaaaaaagTAGGATACGTATGGTAAAACTTTTAGTGCATTTTGA
TACATATACGTAACAATGTCTTCAGagaatacaaaatatttttatttcac
tcggtttggttaaaaaaataatttcttttcagaTAAACTGTCTGAAAAAC
ATGACACATATATAGGTCCcctgaaggaaaaaaaacaaattttgggcAGA
ATTTTTTTCCTCATCATTGATATTTGAAGCAGTGTAATTGGAGTTGTTgt
gtaccgtgaagtcgggtaacttgcatcaatggagggaaacttgcatagcc
atatCAAATGACTGAagaatcaaagcagcaaaattttaaaacaaatgaac
tacgcagctctgctggCAGCtatactctaccatttttgttttgatttaat
ttgtattttaatgaccagccaggttatgcatgttagcctccactgatgca
agttacccgatctcacggtacggGACATAAAATTGGATTGCTGTGATAAA
GGCGCATAGAccttcaaaaactgaaaatatgagATAAAGTTTTATTTCTG
AATTACTTCTTAATTAGTATGTTGACATAAAAAtgcatactctcgggtac
ctaatagccgtccccccgctaattaatttttcgaaaattttccacccagg
acattcttattccaacccccccgcttatttatttttgggaaaatgtttct
GAAAGCTCCctctcttttgtcctaattctgctgtattagcctccatttca
aaagttttccacccaggacatttttattccaaccctcccgcttattaagt
tttgaaattttttccaaccccccccgcttattccaaaccccccggctatt
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttccaa
cccccccgcttattccaaaccccggctattaggtaccccgGTCCATTGAA
CGTTTAAAAACTACATATATTTATAAACCCCGtcgcaaaatcaaaaaaat
aggGGGGCTACGGAGTTTATTCCAGATATAGACAAATATCTGGGAACTGT
CAAAATGGTATATATCGCGTGCCACTGTAGCCCACAATATAGTTTTTGCA
AGTGAGGCAAGGAGGATTTAATTTCATCGGACTAATCtaactttttactg
accaaacTAATGGTACTCCTCCCAttgcttaaaaaattttgagtgttcga
ttaggttcgattaattttttaaaatcatactttatgtaATTGTTCGATTG
AGTTTGATTTAATCGATTATTGTTCGATTGATTGGGTCTGAATCCAGGGG
TCTGAATCAGAGGTACTCCTTACACTAACCAGCTATAATGTAATGTTTTA
AATCACCCGGGCAAAACTTCTAACTTCCAAACTTCTAACCAATAAAATTG
ATTCACCAAAGAATGAGATTCCaacccaaatcaaaacaaaacgaaaCCCT
ACCTGCCAATGAAGGTTTTTAAGCCAGGTACAATTGGATATGGAGCGATG
CTTCTGTTTAGGAAATGCAATTGATGGACTTTCGTGGACATGTTGCAGTT
GCAGGTAACTGTGATGATGATGTGATAAGAGAATAACGTTGTTGAATGAA
GGTCAGGAAGGCAAGAAGATACAATTCTTGCCTTGAACCAGCTAACATGT
GAGCTAAACAACAAGGCGCCATATGCGAAGTTTATAACTTATGAAAGAAA
TCGCGCACTATGAAACTGAGACATTCGTAGCGGCGAACGAGACATTCGTA
GCGGCAAACGAGACAAATGTAGCATCGCTACATATGGTTGTCCCGCGCTA
CGAATGTCCCGCGCTACAAATGTCACAATGCTACATATGACCCAAAATGC
TACAAAAGTCTCAAATTTGCTACGATTGTAATCTAAAATTGCGACATATG
TACAGACgcatctctctctctctctctctctctctctctctctctctctc
tctctctctctctctctctctctctctctctNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGACAAGAGTAGTTAGTCTGGAGTGACTATTGAAAGATGGGCCGC
GATTAGTCacattaaatttaaaatgaaaatatttttggaaaaatcgtCTC
GTGAAAATATACTTCTTTTTTGCAGTTTTTGCAGCACCACATATAGATTC
CTTTATTCTTATCCTTTTAGGTCCAccaagacacccctgtctcacagccg
cgttaaaactttttcctacagcggggataaaaatttcgattgaatACTCA
ATGTGGACAAAGATTCTATATTGTTCTAAGGTTATAAAATCCAGNATTGA
ATACTCAATGTGGACAAAGATTCTATATTGTTCTAAGGTTATAAAATCCA
GTGGTGATGGTTTCGGAGtgtaatttctaaaaaatgaattttgcgaatat
ggggatgaaatcaaagtcaatttctcgaTGGGGCTGAAATTTAAGGATAG
TTTTTCCAaaggggacgaaatttttgcaaaagtttccAATGGGGATGAGG
ccccgcaaatttttttttcgtgaacGGACGGAAGTATCTTCGACGGCCAG
AAGTATCATATTTTGACGGTCGgaagtatcatttttaatttttcctatcc
gtcattccgtggtccagggggtattgggtcatTACCAATCaattaggtag
ggtcagggttgctagtaacggcttgtcactgtgcagGGTGCATACTCGgg
gccttgggccccgcagggttgctagtaacggctcgaatttcagtcagttt
aaaaaaggggtacttttacccatattataataacattacccNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTCT
TCTCTATGGATAATTTAGGTTACTCTCAGGTGTTAAATAGATTAGAGATA
GagaatcttcaaattttattaAACGGAAATTAATAAAAGAGGGGTCGGGG
ATTGTACCTCTAACCCCCCCCGAAATAAGTTAATTGGTGACTAGTACCAA
ACTATTTTAAAATTAACAAAGAGTGGGTCTCGTTTATCAGGCTCCTAAGA
GTAAGATTAATACCAAAAAAGAGGCATACTGTGACCGGAAGAAGAATACC
GTGCCGTGCTAAAGATATTTTGATAATGGTTAGNAACAAAGAGTGGGTCT
CGTTTATCAGGCTCCTAAGAGTAAGATTAATACTAAAAAAGAGGCATACT
GTGGCCGGAAGAAGAATACCGTGCCGTGCTAAAGATATTTTGATAATGGT
TAGATAATCAACGAAAATAATGTGTCTttgatggaaaatattttttttgg
aaaatgttactatagtaatacaaaaaaaaatttaatgagcTCCGCCGAGA
GTCCGATTGATTATCTGACTAATAGCACTGGATTCCATGCTGCGCCCGGT
ACAGCTAATAAATACGTTTTCGGAATCAGGACGGCTGAATGTGGGACGGA
CTTTGTCAACGTACAACTTGAGAAGCTGAAACAGTTCGTTGGAAATCGCA
ACATGAGCATAACCATCCTTGTCAAAGGTTTTGTGTTTTCGAACCTTTAT
TACCTTGTGATCGTCCTTGGTGAGTACGTTTTCGTATTCCTTCATCGTCA
TGTTTGCGCATACCCCAGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040887-exon-sc0002616-1491911889:2121..2484 | TCONS_00040887-exon-sc0002616-1491911889:2121..2484 | Clytia hemisphaerica | exon |
| TCONS_00040887-exon-sc0002616-1510915933:2121..2484 | TCONS_00040887-exon-sc0002616-1510915933:2121..2484 | Clytia hemisphaerica | exon |
| TCONS_00040887-exon-sc0002616-1575043694:2121..2484 | TCONS_00040887-exon-sc0002616-1575043694:2121..2484 | Clytia hemisphaerica | exon |
| TCONS_00040887-exon-sc0002616-1491911889:16523..16641 | TCONS_00040887-exon-sc0002616-1491911889:16523..16641 | Clytia hemisphaerica | exon |
| TCONS_00040887-exon-sc0002616-1510915933:16523..16641 | TCONS_00040887-exon-sc0002616-1510915933:16523..16641 | Clytia hemisphaerica | exon |
| TCONS_00040887-exon-sc0002616-1575043694:16523..16641 | TCONS_00040887-exon-sc0002616-1575043694:16523..16641 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002616 | supercontig | sc0002616:2121..16641 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006310 | DNA recombination |
| GO:0015074 | DNA integration |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0015074 |
DNA integration |
| biological_process |
GO:0006310 |
DNA recombination |
| molecular_function |
GO:0003677 |
DNA binding |
Blast
The following BLAST results are available for this feature:
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