|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040798 ID=TCONS_00040798|Name=TCONS_00040798|organism=Clytia hemisphaerica|type=transcript|length=1339bp
CAGCTTCGcgctatattttttgttcgGGAAAGACTATCAGTTTGGTTTAG
AACTTAGATTTTCGTTCAGACCGCAATGTTCGttatttataatcaaatca
gCCTATGCCCAGGCTAGCTCTCAACAACCTGGTTGGATTTCTgcgaaact
ttcttttaaaatcttatcgagaaagaagaaggatgCTTCTATACAATTTc
tgtttaatttctttttgtcattcaaCAATGTTGTTGCAACATCTCTCCTG
CTTCCAAGTGCCATGAACAATAAGGATTAATTTTTGAAAGGTATGTTGCT
TTTTTTTTGGACGTCAAAATCATCTTTACCCCTGCGGACGACATTTTCGT
AAAAATTAGGGCCTTGGTTTGGTTTCCTtcccagacccccgcgctcaaTA
CAATAGGATCTATCATCGGGACAGCTTGCTGACAGATCGAGATGTgattg
atggattacttatcgattcgGATAGGAGATTGATCAAAgattgatactca
agattttataAAGCTTATGATTAATTATCGATTATGCATTCGATCAGATT
CGATTTATCATCAATAATCTTTTTCGATCATATTGATTTTATCCATTCTT
TCTAATGATTTGGCTCTATCGATTTACAATTGATATACTTGATTGAACTA
ATACTAGCTCGTTAAATAATTAGCAAAGGATCAATACTCAACACTCAAGA
CTTTTTTATGGCTGAATCTTCTATCAATCTcctaggcggcaatcacaaaa
tatcttcattttgcgtCCTCGTTGGATTTAAAAAGTGAGTctgtcggtcg
gtcggtagtagaaattttcgggttttcttaaaattggtctGTGAGGCGGT
AAAAGGTAAAAGGCCGTTAACTGAGGCGGCAGGAGGCCCAATCGCGTGTA
TGTTTTGCGTGGTTTCAGATTATGAGATTTAAACACTGTGACCTTTGACA
CCTAATGGCACActtgtaatgataaacaaagttaaaatgctgcgaatgcg
ctagaaatcgctcacaaaaatcgacaaaaataaaatttttgagcaaagga
aatgtcatcaaaataaaaagtcagaaaaatttaCCCACTCTCCGCctcaa
ttttactcaattttcaggagtcggtcgggcgacgcgaaacgaagatatgt
GATTGCCgccctatccggatcgataagtaatccatcaatcACATATCGCT
CTGTCATCAAGCCATCCCGATGGTCGATAGGATTGATCACATAGGTCTGG
TTCCTTCTTAAAAtgtaaatacttttgtaaattacactttttttagaGGA
GGCATTTGAGGcatatttttctcatttttcagaaaatgt Run BLAST on NCBI transcript from alignment at sc0002564:16510..17848 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040798 ID=TCONS_00040798|Name=TCONS_00040798|organism=Clytia hemisphaerica|type=transcript|length=1339bp|location=Sequence derived from alignment at sc0002564:16510..17848 (Clytia hemisphaerica)
acattttctgaaaaatgagaaaaatatgCCTCAAATGCCTCCtctaaaaa
aagtgtaatttacaaaagtatttacaTTTTAAGAAGGAACCAGACCTATG
TGATCAATCCTATCGACCATCGGGATGGCTTGATGACAGAGCGATATGTg
attgatggattacttatcgatccggatagggcGGCAATCacatatcttcg
tttcgcgtcgcccgaccgactcctgaaaattgagtaaaattgagGCGGAG
AGTGGGtaaatttttctgactttttattttgatgacatttcctttgctca
aaaattttatttttgtcgatttttgtgagcgatttctagcgcattcgcag
cattttaactttgtttatcattacaagTGTGCCATTAGGTGTCAAAGGTC
ACAGTGTTTAAATCTCATAATCTGAAACCACGCAAAACATACACGCGATT
GGGCCTCCTGCCGCCTCAGTTAACGGCCTTTTACCTTTTACCGCCTCACa
gaccaattttaagaaaacccgaaaatttctactaccgaccgaccgacagA
CTCACTTTTTAAATCCAACGAGGacgcaaaatgaagatattttgtgattg
ccgcctaggAGATTGATAGAAGATTCAGCCATAAAAAAGTCTTGAGTGTT
GAGTATTGATCCTTTGCTAATTATTTAACGAGCTAGTATTAGTTCAATCA
AGTATATCAATTGTAAATCGATAGAGCCAAATCATTAGAAAGAATGGATA
AAATCAATATGATCGAAAAAGATTATTGATGATAAATCGAATCTGATCGA
ATGCATAATCGATAATTAATCATAAGCTTtataaaatcttgagtatcaat
cTTTGATCAATCTCCTATCcgaatcgataagtaatccatcaatcACATCT
CGATCTGTCAGCAAGCTGTCCCGATGATAGATCCTATTGTAttgagcgcg
ggggtctgggaAGGAAACCAAACCAAGGCCCTAATTTTTACGAAAATGTC
GTCCGCAGGGGTAAAGATGATTTTGACGTCCAAAAAAAAAGCAACATACC
TTTCAAAAATTAATCCTTATTGTTCATGGCACTTGGAAGCAGGAGAGATG
TTGCAACAACATTGttgaatgacaaaaagaaattaaacagAAATTGTATA
GAAGcatccttcttctttctcgataagattttaaaagaaagtttcgcAGA
AATCCAACCAGGTTGTTGAGAGCTAGCCTGGGCATAGGctgatttgatta
taaataaCGAACATTGCGGTCTGAACGAAAATCTAAGTTCTAAACCAAAC
TGATAGTCTTTCCcgaacaaaaaatatagcgCGAAGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040798-exon-sc0002564-1491911889:16510..17848 | TCONS_00040798-exon-sc0002564-1491911889:16510..17848 | Clytia hemisphaerica | exon |
| TCONS_00040798-exon-sc0002564-1510915933:16510..17848 | TCONS_00040798-exon-sc0002564-1510915933:16510..17848 | Clytia hemisphaerica | exon |
| TCONS_00040798-exon-sc0002564-1575043694:16510..17848 | TCONS_00040798-exon-sc0002564-1575043694:16510..17848 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002564 | supercontig | sc0002564:16510..17848 . |
Blast
The following BLAST results are available for this feature:
|
