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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040774 ID=TCONS_00040774|Name=TCONS_00040774|organism=Clytia hemisphaerica|type=transcript|length=1012bp
AATCATACTAGAGAGGGGATTGACACTcaacaaagaaaaatgtaaatttG
GGGCAAAGGAAATTAAGTTCTGGGGAATGATCATCTCAGCAGCAGGCATC
CGTCCTGATCCTGAGAAGGTTGAGGCCTTGAATCACACGACCACTCCTAA
AAACAAAGAGGAGTTGATCAGTTTTCTCTGCATGATGTAGAGCAATTCTG
ATTTCATTCATGGATTCTCCCAGAAAGCCTCAACCCTCAGGGAACTTACG
AAGAAAGGTAAACGATTCAAATGGGAAAAGAGACACAACAACGCTTTTTA
TTCCTTGATAGAAGCATTTCAGGAGGATATTTTACTACGTTATTTCAACC
CAGTCGCAACTAGTCTTCATCATTTTTGATGGCTACAAAACAGGCCTCAG
AGCAATATTCGCACAGGGACTAAGCCAGTAGCGTTGGCCTCAAGAACGAC
AAATACCTCAGAAAGTAACTGCTCTCAGCTAGACTTAGAAGCTGCTAGTC
TTGATTTTGGCTTGCGAAGATTCCGCAAATATGTTGTAGGATCACCTACT
CTTATCAAGGTGATCACAGATCAAAAGCCCTTCGTACACATATTCAACGG
TCGTCGCAATGGCTCAATCAAGACGAATAGAATTAAATCACCAAGGCATT
CCCTTCATTGCTGAATTCCAAAAAGGCTCGCTAAATCAAGTAGACTACAT
GAGCAGACATGCTAGGAACATCTCCAGTCTACCAATGGAACAAAGAAAAG
AATGCAATGAAATTAACAAGCTACTCTATACGCTCCACACAACACAAATA
ATTGATCACATCACCCTTGCTAACATAGACACAACAAACAGGATAAAACC
CTAAGTAAAATACAAGACTACTTGAAGAAAGGCTACTCAAAGATTCCGCA
AAGCGCCTCAAATGAGGTCAAAAAATTTGGTCCGATTCTTCCAGAACTAA
CTATTGTTGCCAACGGCATTATATTTAAGGACAATAGAGTCGTCTTGCCT
GAGGCTCTACAG Run BLAST on NCBI transcript from alignment at sc0002555:11382..12393 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040774 ID=TCONS_00040774|Name=TCONS_00040774|organism=Clytia hemisphaerica|type=transcript|length=1012bp|location=Sequence derived from alignment at sc0002555:11382..12393 (Clytia hemisphaerica)
CTGTAGAGCCTCAGGCAAGACGACTCTATTGTCCTTAAATATAATGCCGT
TGGCAACAATAGTTAGTTCTGGAAGAATCGGACCAAATTTTTTGACCTCA
TTTGAGGCGCTTTGCGGAATCTTTGAGTAGCCTTTCTTCAAGTAGTCTTG
TATTTTACTTAGGGTTTTATCCTGTTTGTTGTGTCTATGTTAGCAAGGGT
GATGTGATCAATTATTTGTGTTGTGTGGAGCGTATAGAGTAGCTTGTTAA
TTTCATTGCATTCTTTTCTTTGTTCCATTGGTAGACTGGAGATGTTCCTA
GCATGTCTGCTCATGTAGTCTACTTGATTTAGCGAGCCTTTTTGGAATTC
AGCAATGAAGGGAATGCCTTGGTGATTTAATTCTATTCGTCTTGATTGAG
CCATTGCGACGACCGTTGAATATGTGTACGAAGGGCTTTTGATCTGTGAT
CACCTTGATAAGAGTAGGTGATCCTACAACATATTTGCGGAATCTTCGCA
AGCCAAAATCAAGACTAGCAGCTTCTAAGTCTAGCTGAGAGCAGTTACTT
TCTGAGGTATTTGTCGTTCTTGAGGCCAACGCTACTGGCTTAGTCCCTGT
GCGAATATTGCTCTGAGGCCTGTTTTGTAGCCATCAAAAATGATGAAGAC
TAGTTGCGACTGGGTTGAAATAACGTAGTAAAATATCCTCCTGAAATGCT
TCTATCAAGGAATAAAAAGCGTTGTTGTGTCTCTTTTCCCATTTGAATCG
TTTACCTTTCTTCGTAAGTTCCCTGAGGGTTGAGGCTTTCTGGGAGAATC
CATGAATGAAATCAGAATTGCTCTACATCATGCAGAGAAAACTGATCAAC
TCCTCTTTGTTTTTAGGAGTGGTCGTGTGATTCAAGGCCTCAACCTTCTC
AGGATCAGGACGGATGCCTGCTGCTGAGATGATCATTCCCCAGAACTTAA
TTTCCTTTGCCCCaaatttacatttttctttgttgAGTGTCAATCCCCTC
TCTAGTATGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040774-exon-sc0002555-1491911889:11382..12393 | TCONS_00040774-exon-sc0002555-1491911889:11382..12393 | Clytia hemisphaerica | exon |
| TCONS_00040774-exon-sc0002555-1510915933:11382..12393 | TCONS_00040774-exon-sc0002555-1510915933:11382..12393 | Clytia hemisphaerica | exon |
| TCONS_00040774-exon-sc0002555-1575043694:11382..12393 | TCONS_00040774-exon-sc0002555-1575043694:11382..12393 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002555 | supercontig | sc0002555:11382..12393 . |
Blast
The following BLAST results are available for this feature:
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