TCONS_00040759 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040759
Unique NameTCONS_00040759
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1700

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040759 ID=TCONS_00040759|Name=TCONS_00040759|organism=Clytia hemisphaerica|type=transcript|length=1700bp
AGAACATAGCCTTTGCAAACAGGTGTGGGAGGAGTATAGCACCAGCACCA
CAGAAGAATCACCAATAAAGCAGCAAAAGCAAAAATCTCCTGAAAAAGAA
GCCACAAAATTGTATCCCAAGCCACCACCAAGGAGAAACACTCGCAACGA
CAATGCTAATAATTCAGCAATGAATAAATCTGAGTCTGAAAGTAAATCTG
CAAACCCCAGTCCACAGTCATCTAGGAGAAATACCCACAGTGACAATTCT
GATTACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAA
CCCCAGTCCACAGTCATCTAGAAGAAATACCCACAGTGACGATTCTGATT
ACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAACCCC
AGTCCACAGTCATCTAGAAGAAATACCCACAGTGATGATTCTGATTACTC
GCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAGATCTCGAT
CAGTATCAGCAACAAGAAAAAGGATTATgcctgacaacaatattgatgAT
TCGCCAGTCAGAAAGAAACCTGACTCTGAAAGTAGATTATGCAACAATAC
tctaaataagaaaatatatcaGAAACAATTGTCTACAACTCGACCTCGCC
CAGTACCACAACATTCAGCGTATGGTTGTGAATCGGATGAAACGAACAAA
TCTCTTTTAGATGACCATCAATctggatacaaaaaatcgaaatcttcCTG
CCAGAAAGTCCAAAAACGTACTCATTCCCCAATGTCAAATTTTATTGACT
TCGTGAGTTCACCTAGAAGATCTCCAAGATTGAAGCAAAATGTATCAAGA
GCTCGAAAATCACTCGGCTTTGACTCGCGTCACCAATCAACTCGAGGTGT
GTTTGATATTCTGTGTTGTCCAAACCCTTTGTCTTTTAGTCAGATActta
aaaagcaaaaatatattctATATTATGACAACTAAGAGAGAACAacttac
tcttttgtgcttaattatAGGGGGTGGGTACTTggagaaaaatcaataaa
atggaGGGTCATTATAAACTGATATTGAGCGATTTTCCCCCAAAACCCCT
TCACTAATCTATGTTTTACTTCTTCAGAAAAAGAGGGGACACAGGAAAGA
CCATCTTCCTCCAAAAATAAGGATCAATACCCTCTTTCTGAAGCAGccTT
CCAACGTAAAATGGTGAAACTTCTTTTGGATATTAAGTCTgagataagaa
aaaataatcGTCAGCATGCTGAAAACCTTTACAATAGAGGGGCCCCTGCC
AAGTGCACCACAATTGAACAATTGCTCCAGTTTGAAAAGAAACTCGACAA
CCAAGAAGAATATAATAAGTTGATTGATTTGTTTATGACTGTTGGTGGGA
AAGATCTTCGGCTTGTTATCAGGAGGATGCTGCAGTTgATCACCACGAAT
GAAGTATTATCCTGTATAAATTGGGATGGAAACGGAGACAAAATCTCCTT
TAACAAAAAGCTAAAGAACATCTTCCAAGCTCTTGTGGCTTGTGCAAGCC
AGAAATTCAGAACGACACAAGAAGATGTGAAGACCAAACTTCAACTGGTG
TTGAAAGATGCACCCGATCGTGAAGGAGGCCTTCGTTGGGCGGAAAAACA
AAGGAGAAAGAGTTCCTAGCTTATTATAATGAAATAAAAGTGtatagaag
Run BLAST on NCBI

protein sequence of TCONS_00040759-protein

>TCONS_00040759-protein ID=TCONS_00040759-protein|Name=TCONS_00040759-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
EHSLCKQVWEEYSTSTTEESPIKQQKQKSPEKEATKLYPKPPPRRNTRND
NANNSAMNKSESESKSANPSPQSSRRNTHSDNSDYSPVRKKPDSKSRSAN
PSPQSSRRNTHSDDSDYSPVRKKPDSKSRSANPSPQSSRRNTHSDDSDYS
PVRKKPDSKSRSARSRSVSATRKRIMPDNNIDDSPVRKKPDSESRLCNNT
LNKKIYQKQLSTTRPRPVPQHSAYGCESDETNKSLLDDHQSGYKKSKSSC
QKVQKRTHSPMSNFIDFVSSPRRSPRLKQNVSRARKSLGFDSRHQSTRGV
FDILCCPNPLSFSQILKKQKYILYYDN
Run BLAST on NCBI

transcript from alignment at sc0002552:3348..8268-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040759 ID=TCONS_00040759|Name=TCONS_00040759|organism=Clytia hemisphaerica|type=transcript|length=4921bp|location=Sequence derived from alignment at sc0002552:3348..8268- (Clytia hemisphaerica)
AGAACATAGCCTTTGCAAACAGGTGTGGGAGGAGTATAGCACCAGCACCA
CAGAAGAATCACCAATAAAGCAGCAAAAGCAAAAATCTCCTGAAAAAGAA
GCCAGTAAGTTTTCAGTCATTATTTTCAGAAAAAAAAATCCTTCAGGTCT
GATAATGATCTATTAACTTAACATTGGTCTGTCAAGATATCACAAGCTAT
TTAAGTAATTTTAGTCATTCTCTTTTCCAGCAAAATTGTATCCCAAGCCA
CCACCAAGGAGAAACACTCGCAACGACAATGCTAATAATTCAGCAATGAA
TAAATCTGAGTCTGAAAGTAAATCTGGTAAGTATCTTATGAGAAGACATT
TTGGTGGTAATTGAATTTGATGGATGGCCTCAGAAATCAATTTGGCAGAT
CAGCAACAAAATTAAATTTGATTTGGTGGACAATAGATTTAAAATTTCCA
AGTCAAGTTGACAATGTTGAAAACACACTCCATTAGGGCCTAAATCGTCA
CAAGTTAGCTTATTTCTATTTTCTATCATTATCAACCTCTTTTCAGCAAA
CCCCAGTCCACAGTCATCTAGGAGAAATACCCACAGTGACAATTCTGATT
ACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGGTAAGTAT
TATATTAGTTTTTGGAATGAAAACTTTTCATTTAATAAAGGAATTTTTCT
CTTAAAAGTGTCAAATAAACCAATAATTATAACTTTTTCTACCTAAACAT
CACAAGTCAGCTTAGTTCTATTTTTTATCAACCTCTTTTCAGCAAACCCC
AGTCCACAGTCATCTAGAAGAAATACCCACAGTGACGATTCTGATTACTC
GCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGGTAAGTATTATA
TCACTTGGAATGAAACCTTTTCATTTAATAAAGGAATTTTTTTCTTAAAA
GTGTCAAATAAAGCAATGATTATAACTTTTTCTACCATCTACCATCTAAC
TTTTTTACATATAACTTTTTCTACCTAAACATCACAAGTCAGCTTATTTC
TATTTTTTATCAACCTCTTTTCAGCAAACCCCAGTCCACAGTCATCTAGA
AGAAATACCCACAGTGATGATTCTGATTACTCGCCAGTACGAAAGAAGCC
AGATTCTAAAAGTAGATCTGGTAAGTATTATATCACTTGGAATGAAACCT
TTTCATTTAGTAAAGGAATTTTTTTCTTAAAAGTGTCAAATAAAGCAATG
ATTATAACTTTTTCTACCATCTACCATCTAACTTTTTTACATATAACTTT
TTCTACCTAAACATCACAAGTCAGCTTATTTCNTAAAAGTGTCAAATAAA
CCAATGATTATAACTTTTTCTACCATCTACCATCTAACTTTTTTACATAT
AACTTTTTCTACCTAAACATCACAAGTCAGCTTATTTCTATTTTCTATCA
ACCCTTTTTCAGCAAACCCCAGTCCACAGTCAAAATCTAGGAGGAATACC
CACAGTGATATAACTTTGTTTACCCAAACATCACAAGCTACCTATTTTCT
TTTTTATCATTTTCTTCAGCAAGATCTCGATCAGTATCAGCAACAAGAAA
AAGGATTATGCCTGACAACAATATTGATGATTCGCCAGTCAGAAAGAAAC
CTGACTCTGAAAGTAGATTATGTAAGTTTTAACTTTAACATTGGTTCAAT
CTTTGTTGAAATCTTTGCAGTATATTTTGCCAAGCCCTGTTATGATGGAA
AAAATTGTGAAATTGCAGAATTGTAGAGGGTTATTTTATTGCATTAAGGT
GCATTTGGAATCATGATAATAAATTCCGTAATATAATTGTGTTTTCAGGC
AACAATACTCTAAATAAGAAAATATATCAGAAACAATTGTCTACAACTCG
ACCTCGCCCAGTACCACAACATTCAGCGTATGGTTGTGAATCGGATGAAA
CGAACAAATCTCTTTTAGATGACCATCAATGTGAGTCATATGACTTTTGC
TCTATTCTTTGCCGTCTATATATATAAATTGCCAAAAAACAAGAAAACAA
AACTTCCAACAATCTCTTCAGTGAACCCCTGTTTTCATCCTTATCCCCAT
GCAAGATAAAATATGTTTAATTACTAAATTGAATCAATGTGTGCACTCCT
GGTTTTACATTTGGCCCTTACAAATTCTTAAAACTTACGCTATTTTTTAA
AACAATACTGCTTCGACAATAGAACTGTTTGAATAATGAATTGCTTCACG
AGGTGTATTACAAGGTTAATTAACTTGAAGGTTCGAGAGTGTTTCTACAT
ATCCAATCCTGTTTGATTATTTCAGTCTATTACAGTAACAATTCGCATAC
TTATCGCTAGTAGTATAAAAATTGTATTTATTATTTTCAGCTGGATACAA
AAAATCGAAATCTTCCTGCCAGAAAGTCCAAAAACGTACTCATTCCCCAA
TGTCAAATTTTATTGACTTCGTGAGTTCACCTAGAAGATCTCCAAGATTG
AAGCAAAATGTATCAAGAGCTCGAAAATCACTCGGCTTTGACTCGCGTCA
CCAATCAACTCGAGGTGTGTTTGATATTCTGTGTTGTCCAAACCCTTTGT
CTTTTAGTCAGATACTTAAAAAGCAAAAATATATTCTATATTATGACAAC
TAAGAGAGAACAACTTACTCTTTTGTGCTTAATTATAGGGGGTGGGTACT
TGGAGAAAAATCAATAAAATGGAGGGTCATTATAAACTGATATTGAGCGA
TTTTCCCCCAAAACCCCTTCACTAATCTATGTTTTACTTCTTCAGAAAAA
GAGGGGACACAGGAAAGACCATCTTCCTCCAAAAATAAGGATCAATACCC
TCTTTCTGAAGCAGGTAATCTTTGTTTATGAACTTTATACGTTATACTTA
AGGTTGTCATCTAAAGTATGTCTATAAACAACCTGGCTACTTTATTTTTC
CTTTATTTAAGTCTCCTTTCCCACCATTAGACTTGCTACGTTGAATTTTG
CAACAACCTACATTTCTTGATTGTTTTTATTGGGAGCCTCAGAAGGGGAG
GACTTGAGTCTCAAGTATTGTTAACATATGTCTGTTTTTTAATCAATTAT
TTTCTCCTTTTCCTCCTATTTCCCCTGTTTTTACGGGAAACTGAATGTAA
AAAATGACAATCTACTTCTACTTCATTAATTTTTCAGCCTTCCAACGTAA
AATGGTGAAACTTCTTTTGGATATTAAGTCTGAGATAAGAAAAAATAATC
GTCAGCATGCTGAAAACCTTTACAATAGAGGGGCCCCTGCCAAGTGCACC
ACAATTGAACAATTGCTCCAGTTTGAAAAGAAACTCGACAACCAAGAAGA
ATATAATAAGTTGGTACGTACTTTAATATCAGTTTTGCAAATTTTATGTT
TCTAGACAGAGATGCCTCCACAAAAATTGGAATACCATACAATTCTTGCC
TAATTGTAGGGAGAAGGGTTAGCAAACACGACATGTCGTGAAAATTAACT
TCCACTTTGCTCTTGTAGTGAAAATACCAAATCAACGTAGAGCGTGAGGC
TGGGCAAAGCCGACATAGTACCTTGCTTTTTCGTAGTAATATTTTTTGTT
CACTAGAAGGTCCTCTTTCAAATGAACCAAAAGTTTTTTTGATTTTGACG
ATTTTTTGAATTGGATCTGTCTCGTGTAATAGCTCTTCAAATATTGATTT
TCGGATATATTTTTTGTAATCCTCATGTTAAAACCTTTCTTTTAAGCCAT
ATTTGAGCTCTTAATTTTCACTTTCATTTTCAAGCCCCAGCAAAAGTGAT
GACATCACATGGAGACTAGTCAAATTCTCAAAACCCAGTTCACCATAACT
TTTTGTGACCTTACGGACCCAAATGATCATTTAAAAAATTAGTTTGCTTC
TAACAAGCCTGTGCACACGAAGGATGTTTTTGGAACAAAGTGGCTCTCAC
TAAATGGATTAGTCCATCTTTTTTGGCAAACTTATCCAATTGGGTACTTC
CCATGTCTTTTAGATTGATTTGTTTATGACTGTTGGTGGGAAAGATCTTC
GGCTTGTTATCAGGAGGATGCTGCAGTTGTAAGTAACATTACACCTTTTA
CACTTCATCAGATTCTTGGAAATACCGGAACAAGTTTATTCACATTGTTA
TTCACATTTCTTGATTGTTTTTATTGAATGAACTTAACCTAGCTTACCGT
GATTTGGAGCCTTAGAAGTGGAAGGGTTAGAGTGTTAAGCATTTTTGACA
TTTTATTTTTATTTTTATTAAAGGATCACCACGAATGAAGTATTATCCTG
TATAAATTGGGATGGAAACGGAGACAAAATCTCCTTTAACAAAAAGCTAA
AGAACATCTTCCAAGCTCTTGTGGGTAAGCTCCTTCATATATTTATTTCC
ACAAATTTAACTTGACTTGCCTCCGGATATAAAAACTTTACACCCTCCTG
GAAAACGGAAAAAGTTCGCAATTTTTTCAGTATACCTTGTATAAAATATA
TCCTCCACTCCGTACAAGAATTTTTTCAGTTGCCTTATGGGAACTAATTT
ACGTTCGCGTTACGAGGGTCTAGTATAATACGCGGACTAATCTTCGTGCA
CGACACCCACTTTTGACCGAAATTCTTTAATTTTTTATGAATTTTTCAAT
TTTTTTTAGTTCCCTTGAAGTAACCAAAATTTGTGCATAATGAAAGATTT
CTGGTAATTTGTTAAATGTATACCTAATACTTTGAAGCTGTTCTTGTTCT
TAACCTTAGCTTGTGCAAGCCAGAAATTCAGAACGACACAAGAAGATGTG
AAGACCAAACTTCAACTGGTGTTGAAAGATGCACCCGATCGTGAAGGAGG
CCTTCGTTGGGCGGAAAAACAAAGGAGAAAGAGTTCCTAGCTTATTATAA
TGAAATAAAAGTGTATAGAAG

Coding sequence (CDS) from alignment at sc0002552:3348..8268-

>TCONS_00040759 ID=TCONS_00040759|Name=TCONS_00040759|organism=Clytia hemisphaerica|type=CDS|length=7872bp|location=Sequence derived from alignment at sc0002552:3348..8268- (Clytia hemisphaerica)
CTGGATACAAAAAATCGAAATCTTCCTGCCAGAAAGTCCAAAAACGTACT
CATTCCCCAATGTCAAATTTTATTGACTTCGTGAGTTCACCTAGAAGATC
TCCAAGATTGAAGCAAAATGTATCAAGAGCTCGAAAATCACTCGGCTTTG
ACTCGCGTCACCAATCAACTCGAGGTGTGTTTGATATTCTGTGTTGTCCA
AACCCTTTGTCTTTTAGTCAGATACTTAAAAAGCAAAAATATATTCTATA
TTATGACAACTAAGCAACAATACTCTAAATAAGAAAATATATCAGAAACA
ATTGTCTACAACTCGACCTCGCCCAGTACCACAACATTCAGCGTATGGTT
GTGAATCGGATGAAACGAACAAATCTCTTTTAGATGACCATCAATCAAGA
TCTCGATCAGTATCAGCAACAAGAAAAAGGATTATGCCTGACAACAATAT
TGATGATTCGCCAGTCAGAAAGAAACCTGACTCTGAAAGTAGATTATCAA
ACCCCAGTCCACAGTCATCTAGAAGAAATACCCACAGTGATGATTCTGAT
TACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAACCC
CAGTCCACAGTCATCTAGAAGAAATACCCACAGTGACGATTCTGATTACT
CGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAACCCCAGT
CCACAGTCATCTAGGAGAAATACCCACAGTGACAATTCTGATTACTCGCC
AGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAAATTGTATCCCA
AGCCACCACCAAGGAGAAACACTCGCAACGACAATGCTAATAATTCAGCA
ATGAATAAATCTGAGTCTGAAAGTAAATCTGGAACATAGCCTTTGCAAAC
AGGTGTGGGAGGAGTATAGCACCAGCACCACAGAAGAATCACCAATAAAG
CAGCAAAAGCAAAAATCTCCTGAAAAAGAAGCCACTGGATACAAAAAATC
GAAATCTTCCTGCCAGAAAGTCCAAAAACGTACTCATTCCCCAATGTCAA
ATTTTATTGACTTCGTGAGTTCACCTAGAAGATCTCCAAGATTGAAGCAA
AATGTATCAAGAGCTCGAAAATCACTCGGCTTTGACTCGCGTCACCAATC
AACTCGAGGTGTGTTTGATATTCTGTGTTGTCCAAACCCTTTGTCTTTTA
GTCAGATACTTAAAAAGCAAAAATATATTCTATATTATGACAACTAAGCA
ACAATACTCTAAATAAGAAAATATATCAGAAACAATTGTCTACAACTCGA
CCTCGCCCAGTACCACAACATTCAGCGTATGGTTGTGAATCGGATGAAAC
GAACAAATCTCTTTTAGATGACCATCAATCAAGATCTCGATCAGTATCAG
CAACAAGAAAAAGGATTATGCCTGACAACAATATTGATGATTCGCCAGTC
AGAAAGAAACCTGACTCTGAAAGTAGATTATCAAACCCCAGTCCACAGTC
ATCTAGAAGAAATACCCACAGTGATGATTCTGATTACTCGCCAGTACGAA
AGAAGCCAGATTCTAAAAGTAGATCTGCAAACCCCAGTCCACAGTCATCT
AGAAGAAATACCCACAGTGACGATTCTGATTACTCGCCAGTACGAAAGAA
GCCAGATTCTAAAAGTAGATCTGCAAACCCCAGTCCACAGTCATCTAGGA
GAAATACCCACAGTGACAATTCTGATTACTCGCCAGTACGAAAGAAGCCA
GATTCTAAAAGTAGATCTGCAAAATTGTATCCCAAGCCACCACCAAGGAG
AAACACTCGCAACGACAATGCTAATAATTCAGCAATGAATAAATCTGAGT
CTGAAAGTAAATCTGGAACATAGCCTTTGCAAACAGGTGTGGGAGGAGTA
TAGCACCAGCACCACAGAAGAATCACCAATAAAGCAGCAAAAGCAAAAAT
CTCCTGAAAAAGAAGCCACTGGATACAAAAAATCGAAATCTTCCTGCCAG
AAAGTCCAAAAACGTACTCATTCCCCAATGTCAAATTTTATTGACTTCGT
GAGTTCACCTAGAAGATCTCCAAGATTGAAGCAAAATGTATCAAGAGCTC
GAAAATCACTCGGCTTTGACTCGCGTCACCAATCAACTCGAGGTGTGTTT
GATATTCTGTGTTGTCCAAACCCTTTGTCTTTTAGTCAGATACTTAAAAA
GCAAAAATATATTCTATATTATGACAACTAAGCAACAATACTCTAAATAA
GAAAATATATCAGAAACAATTGTCTACAACTCGACCTCGCCCAGTACCAC
AACATTCAGCGTATGGTTGTGAATCGGATGAAACGAACAAATCTCTTTTA
GATGACCATCAATCAAGATCTCGATCAGTATCAGCAACAAGAAAAAGGAT
TATGCCTGACAACAATATTGATGATTCGCCAGTCAGAAAGAAACCTGACT
CTGAAAGTAGATTATCAAACCCCAGTCCACAGTCATCTAGAAGAAATACC
CACAGTGATGATTCTGATTACTCGCCAGTACGAAAGAAGCCAGATTCTAA
AAGTAGATCTGCAAACCCCAGTCCACAGTCATCTAGAAGAAATACCCACA
GTGACGATTCTGATTACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGT
AGATCTGCAAACCCCAGTCCACAGTCATCTAGGAGAAATACCCACAGTGA
CAATTCTGATTACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGAT
CTGCAAAATTGTATCCCAAGCCACCACCAAGGAGAAACACTCGCAACGAC
AATGCTAATAATTCAGCAATGAATAAATCTGAGTCTGAAAGTAAATCTGG
AACATAGCCTTTGCAAACAGGTGTGGGAGGAGTATAGCACCAGCACCACA
GAAGAATCACCAATAAAGCAGCAAAAGCAAAAATCTCCTGAAAAAGAAGC
CACTGGATACAAAAAATCGAAATCTTCCTGCCAGAAAGTCCAAAAACGTA
CTCATTCCCCAATGTCAAATTTTATTGACTTCGTGAGTTCACCTAGAAGA
TCTCCAAGATTGAAGCAAAATGTATCAAGAGCTCGAAAATCACTCGGCTT
TGACTCGCGTCACCAATCAACTCGAGGTGTGTTTGATATTCTGTGTTGTC
CAAACCCTTTGTCTTTTAGTCAGATACTTAAAAAGCAAAAATATATTCTA
TATTATGACAACTAAGCAACAATACTCTAAATAAGAAAATATATCAGAAA
CAATTGTCTACAACTCGACCTCGCCCAGTACCACAACATTCAGCGTATGG
TTGTGAATCGGATGAAACGAACAAATCTCTTTTAGATGACCATCAATCAA
GATCTCGATCAGTATCAGCAACAAGAAAAAGGATTATGCCTGACAACAAT
ATTGATGATTCGCCAGTCAGAAAGAAACCTGACTCTGAAAGTAGATTATC
AAACCCCAGTCCACAGTCATCTAGAAGAAATACCCACAGTGATGATTCTG
ATTACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAAC
CCCAGTCCACAGTCATCTAGAAGAAATACCCACAGTGACGATTCTGATTA
CTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAACCCCA
GTCCACAGTCATCTAGGAGAAATACCCACAGTGACAATTCTGATTACTCG
CCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAAATTGTATCC
CAAGCCACCACCAAGGAGAAACACTCGCAACGACAATGCTAATAATTCAG
CAATGAATAAATCTGAGTCTGAAAGTAAATCTGGAACATAGCCTTTGCAA
ACAGGTGTGGGAGGAGTATAGCACCAGCACCACAGAAGAATCACCAATAA
AGCAGCAAAAGCAAAAATCTCCTGAAAAAGAAGCCACTGGATACAAAAAA
TCGAAATCTTCCTGCCAGAAAGTCCAAAAACGTACTCATTCCCCAATGTC
AAATTTTATTGACTTCGTGAGTTCACCTAGAAGATCTCCAAGATTGAAGC
AAAATGTATCAAGAGCTCGAAAATCACTCGGCTTTGACTCGCGTCACCAA
TCAACTCGAGGTGTGTTTGATATTCTGTGTTGTCCAAACCCTTTGTCTTT
TAGTCAGATACTTAAAAAGCAAAAATATATTCTATATTATGACAACTAAG
CAACAATACTCTAAATAAGAAAATATATCAGAAACAATTGTCTACAACTC
GACCTCGCCCAGTACCACAACATTCAGCGTATGGTTGTGAATCGGATGAA
ACGAACAAATCTCTTTTAGATGACCATCAATCAAGATCTCGATCAGTATC
AGCAACAAGAAAAAGGATTATGCCTGACAACAATATTGATGATTCGCCAG
TCAGAAAGAAACCTGACTCTGAAAGTAGATTATCAAACCCCAGTCCACAG
TCATCTAGAAGAAATACCCACAGTGATGATTCTGATTACTCGCCAGTACG
AAAGAAGCCAGATTCTAAAAGTAGATCTGCAAACCCCAGTCCACAGTCAT
CTAGAAGAAATACCCACAGTGACGATTCTGATTACTCGCCAGTACGAAAG
AAGCCAGATTCTAAAAGTAGATCTGCAAACCCCAGTCCACAGTCATCTAG
GAGAAATACCCACAGTGACAATTCTGATTACTCGCCAGTACGAAAGAAGC
CAGATTCTAAAAGTAGATCTGCAAAATTGTATCCCAAGCCACCACCAAGG
AGAAACACTCGCAACGACAATGCTAATAATTCAGCAATGAATAAATCTGA
GTCTGAAAGTAAATCTGGAACATAGCCTTTGCAAACAGGTGTGGGAGGAG
TATAGCACCAGCACCACAGAAGAATCACCAATAAAGCAGCAAAAGCAAAA
ATCTCCTGAAAAAGAAGCCACTGGATACAAAAAATCGAAATCTTCCTGCC
AGAAAGTCCAAAAACGTACTCATTCCCCAATGTCAAATTTTATTGACTTC
GTGAGTTCACCTAGAAGATCTCCAAGATTGAAGCAAAATGTATCAAGAGC
TCGAAAATCACTCGGCTTTGACTCGCGTCACCAATCAACTCGAGGTGTGT
TTGATATTCTGTGTTGTCCAAACCCTTTGTCTTTTAGTCAGATACTTAAA
AAGCAAAAATATATTCTATATTATGACAACTAAGCAACAATACTCTAAAT
AAGAAAATATATCAGAAACAATTGTCTACAACTCGACCTCGCCCAGTACC
ACAACATTCAGCGTATGGTTGTGAATCGGATGAAACGAACAAATCTCTTT
TAGATGACCATCAATCAAGATCTCGATCAGTATCAGCAACAAGAAAAAGG
ATTATGCCTGACAACAATATTGATGATTCGCCAGTCAGAAAGAAACCTGA
CTCTGAAAGTAGATTATCAAACCCCAGTCCACAGTCATCTAGAAGAAATA
CCCACAGTGATGATTCTGATTACTCGCCAGTACGAAAGAAGCCAGATTCT
AAAAGTAGATCTGCAAACCCCAGTCCACAGTCATCTAGAAGAAATACCCA
CAGTGACGATTCTGATTACTCGCCAGTACGAAAGAAGCCAGATTCTAAAA
GTAGATCTGCAAACCCCAGTCCACAGTCATCTAGGAGAAATACCCACAGT
GACAATTCTGATTACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAG
ATCTGCAAAATTGTATCCCAAGCCACCACCAAGGAGAAACACTCGCAACG
ACAATGCTAATAATTCAGCAATGAATAAATCTGAGTCTGAAAGTAAATCT
GGAACATAGCCTTTGCAAACAGGTGTGGGAGGAGTATAGCACCAGCACCA
CAGAAGAATCACCAATAAAGCAGCAAAAGCAAAAATCTCCTGAAAAAGAA
GCCACTGGATACAAAAAATCGAAATCTTCCTGCCAGAAAGTCCAAAAACG
TACTCATTCCCCAATGTCAAATTTTATTGACTTCGTGAGTTCACCTAGAA
GATCTCCAAGATTGAAGCAAAATGTATCAAGAGCTCGAAAATCACTCGGC
TTTGACTCGCGTCACCAATCAACTCGAGGTGTGTTTGATATTCTGTGTTG
TCCAAACCCTTTGTCTTTTAGTCAGATACTTAAAAAGCAAAAATATATTC
TATATTATGACAACTAAGCAACAATACTCTAAATAAGAAAATATATCAGA
AACAATTGTCTACAACTCGACCTCGCCCAGTACCACAACATTCAGCGTAT
GGTTGTGAATCGGATGAAACGAACAAATCTCTTTTAGATGACCATCAATC
AAGATCTCGATCAGTATCAGCAACAAGAAAAAGGATTATGCCTGACAACA
ATATTGATGATTCGCCAGTCAGAAAGAAACCTGACTCTGAAAGTAGATTA
TCAAACCCCAGTCCACAGTCATCTAGAAGAAATACCCACAGTGATGATTC
TGATTACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAA
ACCCCAGTCCACAGTCATCTAGAAGAAATACCCACAGTGACGATTCTGAT
TACTCGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAACCC
CAGTCCACAGTCATCTAGGAGAAATACCCACAGTGACAATTCTGATTACT
CGCCAGTACGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAAATTGTAT
CCCAAGCCACCACCAAGGAGAAACACTCGCAACGACAATGCTAATAATTC
AGCAATGAATAAATCTGAGTCTGAAAGTAAATCTGGAACATAGCCTTTGC
AAACAGGTGTGGGAGGAGTATAGCACCAGCACCACAGAAGAATCACCAAT
AAAGCAGCAAAAGCAAAAATCTCCTGAAAAAGAAGCCACTGGATACAAAA
AATCGAAATCTTCCTGCCAGAAAGTCCAAAAACGTACTCATTCCCCAATG
TCAAATTTTATTGACTTCGTGAGTTCACCTAGAAGATCTCCAAGATTGAA
GCAAAATGTATCAAGAGCTCGAAAATCACTCGGCTTTGACTCGCGTCACC
AATCAACTCGAGGTGTGTTTGATATTCTGTGTTGTCCAAACCCTTTGTCT
TTTAGTCAGATACTTAAAAAGCAAAAATATATTCTATATTATGACAACTA
AGCAACAATACTCTAAATAAGAAAATATATCAGAAACAATTGTCTACAAC
TCGACCTCGCCCAGTACCACAACATTCAGCGTATGGTTGTGAATCGGATG
AAACGAACAAATCTCTTTTAGATGACCATCAATCAAGATCTCGATCAGTA
TCAGCAACAAGAAAAAGGATTATGCCTGACAACAATATTGATGATTCGCC
AGTCAGAAAGAAACCTGACTCTGAAAGTAGATTATCAAACCCCAGTCCAC
AGTCATCTAGAAGAAATACCCACAGTGATGATTCTGATTACTCGCCAGTA
CGAAAGAAGCCAGATTCTAAAAGTAGATCTGCAAACCCCAGTCCACAGTC
ATCTAGAAGAAATACCCACAGTGACGATTCTGATTACTCGCCAGTACGAA
AGAAGCCAGATTCTAAAAGTAGATCTGCAAACCCCAGTCCACAGTCATCT
AGGAGAAATACCCACAGTGACAATTCTGATTACTCGCCAGTACGAAAGAA
GCCAGATTCTAAAAGTAGATCTGCAAAATTGTATCCCAAGCCACCACCAA
GGAGAAACACTCGCAACGACAATGCTAATAATTCAGCAATGAATAAATCT
GAGTCTGAAAGTAAATCTGGAACATAGCCTTTGCAAACAGGTGTGGGAGG
AGTATAGCACCAGCACCACAGAAGAATCACCAATAAAGCAGCAAAAGCAA
AAATCTCCTGAAAAAGAAGCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024837XLOC_024837Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040759-exon-sc0002552-1575043694:8165..8268TCONS_00040759-exon-sc0002552-1575043694:8165..8268Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:7943..8038TCONS_00040759-exon-sc0002552-1575043694:7943..8038Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:7627..7722TCONS_00040759-exon-sc0002552-1575043694:7627..7722Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:7381..7476TCONS_00040759-exon-sc0002552-1575043694:7381..7476Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:7099..7194TCONS_00040759-exon-sc0002552-1575043694:7099..7194Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:6598..6699TCONS_00040759-exon-sc0002552-1575043694:6598..6699Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:6289..6420TCONS_00040759-exon-sc0002552-1575043694:6289..6420Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:5405..5878TCONS_00040759-exon-sc0002552-1575043694:5405..5878Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:4906..5081TCONS_00040759-exon-sc0002552-1575043694:4906..5081Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:4191..4255TCONS_00040759-exon-sc0002552-1575043694:4191..4255Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:3895..3995TCONS_00040759-exon-sc0002552-1575043694:3895..3995Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1575043694:3348..3509TCONS_00040759-exon-sc0002552-1575043694:3348..3509Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:8165..8268TCONS_00040759-exon-sc0002552-1510915933:8165..8268Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:7943..8038TCONS_00040759-exon-sc0002552-1510915933:7943..8038Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:7627..7722TCONS_00040759-exon-sc0002552-1510915933:7627..7722Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:7381..7476TCONS_00040759-exon-sc0002552-1510915933:7381..7476Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:7099..7194TCONS_00040759-exon-sc0002552-1510915933:7099..7194Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:6598..6699TCONS_00040759-exon-sc0002552-1510915933:6598..6699Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:6289..6420TCONS_00040759-exon-sc0002552-1510915933:6289..6420Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:5405..5878TCONS_00040759-exon-sc0002552-1510915933:5405..5878Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:4906..5081TCONS_00040759-exon-sc0002552-1510915933:4906..5081Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:4191..4255TCONS_00040759-exon-sc0002552-1510915933:4191..4255Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:3895..3995TCONS_00040759-exon-sc0002552-1510915933:3895..3995Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1510915933:3348..3509TCONS_00040759-exon-sc0002552-1510915933:3348..3509Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:8165..8268TCONS_00040759-exon-sc0002552-1491911889:8165..8268Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:7943..8038TCONS_00040759-exon-sc0002552-1491911889:7943..8038Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:7627..7722TCONS_00040759-exon-sc0002552-1491911889:7627..7722Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:7381..7476TCONS_00040759-exon-sc0002552-1491911889:7381..7476Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:7099..7194TCONS_00040759-exon-sc0002552-1491911889:7099..7194Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:6598..6699TCONS_00040759-exon-sc0002552-1491911889:6598..6699Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:6289..6420TCONS_00040759-exon-sc0002552-1491911889:6289..6420Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:5405..5878TCONS_00040759-exon-sc0002552-1491911889:5405..5878Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:4906..5081TCONS_00040759-exon-sc0002552-1491911889:4906..5081Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:4191..4255TCONS_00040759-exon-sc0002552-1491911889:4191..4255Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:3895..3995TCONS_00040759-exon-sc0002552-1491911889:3895..3995Clytia hemisphaericaexon
TCONS_00040759-exon-sc0002552-1491911889:3348..3509TCONS_00040759-exon-sc0002552-1491911889:3348..3509Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040759-proteinTCONS_00040759-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002552supercontigsc0002552:3348..8268 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0.245783	0.394427	3.27823	3.11363	1.26425	0.899959	1.08555	0.243875	0.486024	0	0.571236	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040759 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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