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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040748 ID=TCONS_00040748|Name=TCONS_00040748|organism=Clytia hemisphaerica|type=transcript|length=936bp
ATAGGGAtgggtggaataagcaggggggttggtaCTCTGGGAGAAAATTC
ATAGTAAGTGATTTTagacaattaagcacaaaagagcaAGGCAATCATCA
ATTCTGAGGGCAATTATTAAACAGATTTTAGTTTTATGTAAATTATGTTC
CGTTTAGTTTAGTTCGAGGTCAAATTGCGATGTCCTCAAAGtttatgaaa
cttttttccatCCTCGACCCCAGAGCTTATTtgacccccttacgctattg
atccTGATANATGTTCCGTTTAGTTTAGTTCGAGGTCAAATTGCGATGTC
CTCAAAGtttatgaaacttttttccatCCTCGACCCCAGAGCTTATTtga
cccccttacgctattgatccTGAtagacgcgttgacgggggataaaAACA
ATTCCTTAAATTTTTGTCTGGATGCCTGAGCTGTTAAAACCTATGCAACC
CCCTTTAGGAAATTAGGATCAGAAAAGGACCTCTCTTACGAACATTTTTG
AAAGCtctccaaccccccccctgggggtaAGAGCCTATGCTAATTTTAGG
GGacgagctggagtttttataatatacttcacccggggggggggggtact
atgAGAATCTCGGGTATGTGCGGACCGggcctccgaaaaccgacccttaa
gaGAGAGACTAATCTTTGTTAAAAAGCTGACCCTTAGAAAAACTAAATTG
CTTAAAAAGCAACCCTTAcgccttagagagacttttttacaaaattttct
tcgattttcaagaaaaaactccagttttgaaaaaattggtcgaagttttg
aataattttcttacttttttacttttttaccaTTCTTGGACTCGATTTTA
TGAAAAAACCGACTCTTAGAGATactgtttttgactttttgttgttttgg
taacCCTTAGTCTTAGAGAGACTCTGAAAAAAACCG Run BLAST on NCBI transcript from alignment at sc0002546:20429..21364 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040748 ID=TCONS_00040748|Name=TCONS_00040748|organism=Clytia hemisphaerica|type=transcript|length=936bp|location=Sequence derived from alignment at sc0002546:20429..21364 (Clytia hemisphaerica)
CGGTTTTTTTCAGAGTCTCTCTAAGACTAAGGgttaccaaaacaacaaaa
agtcaaaaacagtATCTCTAAGAGTCGGTTTTTTCATAAAATCGAGTCCA
AGAAtggtaaaaaagtaaaaaagtaagaaaattattcaaaacttcgacca
attttttcaaaactggagttttttcttgaaaatcgaagaaaattttgtaa
aaaagtctctctaaggcgTAAGGGTTGCTTTTTAAGCAATTTAGTTTTTC
TAAGGGTCAGCTTTTTAACAAAGATTAGTCTCTCtcttaagggtcggttt
tcggaggccCGGTCCGCACATACCCGAGATTCTcatagtacccccccccc
ccgggtgaagtatattataaaaactccagctcgtCCCCTAAAATTAGCAT
AGGCTCTtacccccagggggggggttggagaGCTTTCAAAAATGTTCGTA
AGAGAGGTCCTTTTCTGATCCTAATTTCCTAAAGGGGGTTGCATAGGTTT
TAACAGCTCAGGCATCCAGACAAAAATTTAAGGAATTGTTtttatccccc
gtcaacgcgtctaTCAggatcaatagcgtaagggggtcaAATAAGCTCTG
GGGTCGAGGatggaaaaaagtttcataaaCTTTGAGGACATCGCAATTTG
ACCTCGAACTAAACTAAACGGAACATNTATCAggatcaatagcgtaaggg
ggtcaAATAAGCTCTGGGGTCGAGGatggaaaaaagtttcataaaCTTTG
AGGACATCGCAATTTGACCTCGAACTAAACTAAACGGAACATAATTTACA
TAAAACTAAAATCTGTTTAATAATTGCCCTCAGAATTGATGATTGCCTtg
ctcttttgtgcttaattgtctAAAATCACTTACTATGAATTTTCTCCCAG
AGtaccaacccccctgcttattccacccaTCCCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040748-exon-sc0002546-1491911889:20429..21364 | TCONS_00040748-exon-sc0002546-1491911889:20429..21364 | Clytia hemisphaerica | exon |
| TCONS_00040748-exon-sc0002546-1510915933:20429..21364 | TCONS_00040748-exon-sc0002546-1510915933:20429..21364 | Clytia hemisphaerica | exon |
| TCONS_00040748-exon-sc0002546-1575043694:20429..21364 | TCONS_00040748-exon-sc0002546-1575043694:20429..21364 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002546 | supercontig | sc0002546:20429..21364 . |
Blast
The following BLAST results are available for this feature:
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