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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040713 ID=TCONS_00040713|Name=TCONS_00040713|organism=Clytia hemisphaerica|type=transcript|length=1119bp
NNttttgatttcatcgtgtttaagccaccttcccaacatccaaaggactc
taaatgcgttcagcaaacagctaaaccggcgtgcgacggcgggtaccggc
tagtctatttataatatataaagataattactgtgtcataaaatctgctc
tcctacacaaatttttctCTCCTACAGAAATCTTGCGCCCcccccttgtc
tacgctactgggaAAGACCCGGTGTAGCGGATTATTTTAACTCCCTGTAA
AAGATAACTCCCCAGTCATAATAAACTAGTAAAAAACACTCCCCTAGAGT
AGAAATTTCCCAGGAAATTATAACTCccttagtaaataatgactccccAA
AACCTTTATTCTAAAGAGGTAGGGAGTTAAAATAAACTAGTTGGATAAGA
CTCCCCTCAAAAGTCAAgcaaaagaagtcattgtattgcaatgcatttcg
aacgttcgaatgttttgatttcctCTGATGCAATACACATGCACATGGTC
AGATACTAAACTGCTTTGCAAAATACAAGATGGCGACGAGAAATCACGTT
TGTTTTGAAGAAGTAAAAACTTATTTGGAGAAAAGTAACTATCCAGATGA
TTTTTCAGGTTAGTTATTTCTTATTTCATGGCTGATGTACTCGTGTGATT
GTTTACACCTTTGATTTCGGAAGAAATCAAGAGTACCTAGATTGATACTG
TGGAAATTATGGAGATGACACATGCTGTTGTTGGTATTCCCAGCAAAAAA
CAGTTGTTCAGGTAAACATATGATATGAAAGAATCACTAATTGATGTACT
TCACAACGTACACAATAATATTTCCGTATTTAGATTCAAGAAGAAAGAAT
GTTGATAGAAGAAAGCATTTTACATGGTGACAAGATAAAAGTCTTCGTGG
AGACATCCTCCATCCTGACAGAAAACCTGCCGATGCTAATAAGCGTTGAT
CAGCAATACCAATTTATACAGAACTCATCAACGGTAGCTGCAGCAGCCAT
CTCAACAGCAACATTATCAACATTAACACATGccatgaaaaaaacaaaca
aaggaaacagtagcgtagacaggagggcgCAAAATCTGtgtaaaaatctg
ctctccaacACAAATTttc Run BLAST on NCBI transcript from alignment at sc0002536:8441..9559 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040713 ID=TCONS_00040713|Name=TCONS_00040713|organism=Clytia hemisphaerica|type=transcript|length=1119bp|location=Sequence derived from alignment at sc0002536:8441..9559 (Clytia hemisphaerica)
gaaAATTTGTgttggagagcagatttttacaCAGATTTTGcgccctcctg
tctacgctactgtttcctttgtttgtttttttcatggCATGTGTTAATGT
TGATAATGTTGCTGTTGAGATGGCTGCTGCAGCTACCGTTGATGAGTTCT
GTATAAATTGGTATTGCTGATCAACGCTTATTAGCATCGGCAGGTTTTCT
GTCAGGATGGAGGATGTCTCCACGAAGACTTTTATCTTGTCACCATGTAA
AATGCTTTCTTCTATCAACATTCTTTCTTCTTGAATCTAAATACGGAAAT
ATTATTGTGTACGTTGTGAAGTACATCAATTAGTGATTCTTTCATATCAT
ATGTTTACCTGAACAACTGTTTTTTGCTGGGAATACCAACAACAGCATGT
GTCATCTCCATAATTTCCACAGTATCAATCTAGGTACTCTTGATTTCTTC
CGAAATCAAAGGTGTAAACAATCACACGAGTACATCAGCCATGAAATAAG
AAATAACTAACCTGAAAAATCATCTGGATAGTTACTTTTCTCCAAATAAG
TTTTTACTTCTTCAAAACAAACGTGATTTCTCGTCGCCATCTTGTATTTT
GCAAAGCAGTTTAGTATCTGACCATGTGCATGTGTATTGCATCAGaggaa
atcaaaacattcgaacgttcgaaatgcattgcaatacaatgacttctttt
gcTTGACTTTTGAGGGGAGTCTTATCCAACTAGTTTATTTTAACTCCCTA
CCTCTTTAGAATAAAGGTTTTggggagtcattatttactaaggGAGTTAT
AATTTCCTGGGAAATTTCTACTCTAGGGGAGTGTTTTTTACTAGTTTATT
ATGACTGGGGAGTTATCTTTTACAGGGAGTTAAAATAATCCGCTACACCG
GGTCTTtcccagtagcgtagacaagggggGGGCGCAAGATTTCTGTAGGA
Gagaaaaatttgtgtaggagagcagattttatgacacagtaattatcttt
atatattataaatagactagccggtacccgccgtcgcacgccggtttagc
tgtttgctgaacgcatttagagtcctttggatgttgggaaggtggcttaa
acacgatgaaatcaaaaNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040713-exon-sc0002536-1491911889:8441..9559 | TCONS_00040713-exon-sc0002536-1491911889:8441..9559 | Clytia hemisphaerica | exon |
| TCONS_00040713-exon-sc0002536-1510915933:8441..9559 | TCONS_00040713-exon-sc0002536-1510915933:8441..9559 | Clytia hemisphaerica | exon |
| TCONS_00040713-exon-sc0002536-1575043694:8441..9559 | TCONS_00040713-exon-sc0002536-1575043694:8441..9559 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002536 | supercontig | sc0002536:8441..9559 . |
Blast
The following BLAST results are available for this feature:
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