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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040668 ID=TCONS_00040668|Name=TCONS_00040668|organism=Clytia hemisphaerica|type=transcript|length=1028bp
tgacattcttagctttgatagcaaaattccatgatggtgatattcttagc
atattcttagttttttggccattttcatcatggacactcttataaagtgt
atttttacaaaaataaagcAGTGTAGTGAGGGCCATTATCACGTGATGCT
TTTTAGAAACACgtagttttgaaagttgaaCTTTTTGTCATTAAGGTGAT
TATTTTTCCATTATAATATTAGTCTGGACCCATACTAATTTTTACTCCAT
TTCACAAAGCTCACATGAGATAAAAATTAGTATGGTAGAattggagattt
tgaatttgcTACGGATTTTCTTTATCTGCTTAAAAGAGCTTTTAAGATTA
TTTACTTTCAATGTTACTGACAGTTACTTTACTTTCAATGTTACCAGATT
AATAGGAgtttggttttaaaatttcNCTTTCGGGAGAACAATAGACATAA
TTGGCCAATCAGAAGcgtttctacaaaaagttgtagaaatttttgtccaa
aactacCCGTCTACTATTATAATATTTGATCTGATTATATATATCTTAGT
CTTTTGTTTAATACATTATTTTTGTATTGATGTTATTAGTCTTATGACTT
TTCGAATAGTCTTTTGTATAACATATTTGGTATAATTATATAATTGGCCC
AGCCAAGCCCGCGCAGCAAGATGGGCCTTTAAAAAGTAACTGACCGaaaa
gattttggctttttcggggcctgtgcgcgcaataaattaacaagtccagt
agtccaggctaaaccagcggccgatttagaattttttgcCTAGCCTCCCC
GCACGATGTTTGAGCTACTCTTATAtgggattgaattggtagtaaagtca
aatttcattctctttatggcaaagtaatttttaaggttttcaagATGGAG
TTAGGTCAGGTGTCAGGGAGCAATTGGGAGCATTTGGATGTTGGAATTTT
ATATTTCAAGCTTGACAgagacttttttcaagtaaacttatgttgtaatt
cATTAAATGATACTAAAATACAGCTCAT Run BLAST on NCBI transcript from alignment at sc0002517:585..1612 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040668 ID=TCONS_00040668|Name=TCONS_00040668|organism=Clytia hemisphaerica|type=transcript|length=1028bp|location=Sequence derived from alignment at sc0002517:585..1612 (Clytia hemisphaerica)
ATGAGCTGTATTTTAGTATCATTTAATgaattacaacataagtttacttg
aaaaaagtctcTGTCAAGCTTGAAATATAAAATTCCAACATCCAAATGCT
CCCAATTGCTCCCTGACACCTGACCTAACTCCATcttgaaaaccttaaaa
attactttgccataaagagaatgaaatttgactttactaccaattcaatc
ccaTATAAGAGTAGCTCAAACATCGTGCGGGGAGGCTAGgcaaaaaattc
taaatcggccgctggtttagcctggactactggacttgttaatttattgc
gcgcacaggccccgaaaaagccaaaatcttttCGGTCAGTTACTTTTTAA
AGGCCCATCTTGCTGCGCGGGCTTGGCTGGGCCAATTATATAATTATACC
AAATATGTTATACAAAAGACTATTCGAAAAGTCATAAGACTAATAACATC
AATACAAAAATAATGTATTAAACAAAAGACTAAGATATATATAATCAGAT
CAAATATTATAATAGTAGACGGgtagttttggacaaaaatttctacaact
ttttgtagaaacgCTTCTGATTGGCCAATTATGTCTATTGTTCTCCCGAA
AGNgaaattttaaaaccaaacTCCTATTAATCTGGTAACATTGAAAGTAA
AGTAACTGTCAGTAACATTGAAAGTAAATAATCTTAAAAGCTCTTTTAAG
CAGATAAAGAAAATCCGTAgcaaattcaaaatctccaatTCTACCATACT
AATTTTTATCTCATGTGAGCTTTGTGAAATGGAGTAAAAATTAGTATGGG
TCCAGACTAATATTATAATGGAAAAATAATCACCTTAATGACAAAAAGtt
caactttcaaaactacGTGTTTCTAAAAAGCATCACGTGATAATGGCCCT
CACTACACTgctttatttttgtaaaaatacactttataagagtgtccatg
atgaaaatggccaaaaaactaagaatatgctaagaatatcaccatcatgg
aattttgctatcaaagctaagaatgtca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040668-exon-sc0002517-1491911889:585..1612 | TCONS_00040668-exon-sc0002517-1491911889:585..1612 | Clytia hemisphaerica | exon |
| TCONS_00040668-exon-sc0002517-1510915933:585..1612 | TCONS_00040668-exon-sc0002517-1510915933:585..1612 | Clytia hemisphaerica | exon |
| TCONS_00040668-exon-sc0002517-1575043694:585..1612 | TCONS_00040668-exon-sc0002517-1575043694:585..1612 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002517 | supercontig | sc0002517:585..1612 . |
Blast
The following BLAST results are available for this feature:
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