TCONS_00040655 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040655
Unique NameTCONS_00040655
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length116

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040655 ID=TCONS_00040655|Name=TCONS_00040655|organism=Clytia hemisphaerica|type=transcript|length=116bp
AAGATCTTGTTAGGGACAATGATCACTACGTAGTAATGAAAAAACTACAA
AGATACTCAAAGAATGTAACAGGTACGAATGCCTATTGGTGCGATGTCAA
GGAAAAATTAAAAGCC
Run BLAST on NCBI

transcript from alignment at sc0002510:16731..16846

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040655 ID=TCONS_00040655|Name=TCONS_00040655|organism=Clytia hemisphaerica|type=transcript|length=116bp|location=Sequence derived from alignment at sc0002510:16731..16846 (Clytia hemisphaerica)
GGCTTTTAATTTTTCCTTGACATCGCACCAATAGGCATTCGTACCTGTTA
CATTCTTTGAGTATCTTTGTAGTTTTTTCATTACTACGTAGTGATCATTG
TCCCTAACAAGATCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024764XLOC_024764Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040655-exon-sc0002510-1491911889:16731..16846TCONS_00040655-exon-sc0002510-1491911889:16731..16846Clytia hemisphaericaexon
TCONS_00040655-exon-sc0002510-1510915933:16731..16846TCONS_00040655-exon-sc0002510-1510915933:16731..16846Clytia hemisphaericaexon
TCONS_00040655-exon-sc0002510-1575043694:16731..16846TCONS_00040655-exon-sc0002510-1575043694:16731..16846Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002510supercontigsc0002510:16731..16846 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040655 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top