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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040608 ID=TCONS_00040608|Name=TCONS_00040608|organism=Clytia hemisphaerica|type=transcript|length=1160bp
TGGTCATTTTGTTTCGTTttgagttttcaagttttaaaataattatcttg
ggatcttgaacttgattcaggtaactcttaTCCTTATTGTTGCAATTTGT
atgatgtttttttctgaaagcttgatttacTACAAATAGTCACACTAGTG
CCCTGCCCAAATGTGATGTCATGCATTAAATTTGATGTTACATGTCTAGC
AGCGCCATCGAGAAACGTATGAATTCCCGCCATTATGAAATTTACGATCT
CGCATAAATTTTTATTGTCCAACCACGCTCTTTTATTCACCCGCTATTCT
GTCGCAAAGCAACTCACCAAAAATACTCATGCAGCAAATatgagattcta
aaatggtagagtagggCAGCGAGCAGAGCCATGGTTTCATCCATGATTTT
GAGTCCCCCCTTAAAACACAAATCATCCCTTATCAATTTATCCCCCCTTA
AAAGCTTAAAGATGGTTTTGAGGTGCCCCTTAAGTTTTACTCCCCCCTTA
AATTTGCAAGACTCTTACGTATACATGCCCTTAATTTTTGGGGTGTAGAG
ACAAGCGAGAAATTAGTCCATAAACACAATAACAACCACTTTTTAGCCCA
CAGCATTGACATTCTTGTGGCTGCTGTGTAgtacaaaatttcataaaata
agaAAGTtgatgagctttccaaaaatgtggccctctttgaagttgagtga
ttcagtcttgaaatataagatgTCAAAGTGAGGGCAGGTTTTGTGGCTGT
ATGTCACTGTGGCTCACTCAAcgggttggcttatatgtgctgtcctgctt
tgaaacttcaatattttttagccgtttttcttgaaattggtagttttAAA
GGTCggataaagatacttatgggtttaatttgtggctgcagggttttcaa
tgggcttaaaatgtggcttcaatcatacttcaatcactaatttattaatt
tacacattccaggttgggttttgtttttaaaacatgaaaatttgcaaagC
CTAATGCAAAGCAAACACAATCTGACACAATacagtgttattttaagaaa
gaGTGTACATTTTGTGGCTGCAACTATACCATTTTTTGTAACTATAACCC
TCTAAGCTGTTACATATAAGTATTAGTTGGCATATTTAGGGTTGGcttat
gtgctgtcct Run BLAST on NCBI transcript from alignment at sc0002492:17812..18971 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040608 ID=TCONS_00040608|Name=TCONS_00040608|organism=Clytia hemisphaerica|type=transcript|length=1160bp|location=Sequence derived from alignment at sc0002492:17812..18971 (Clytia hemisphaerica)
aggacagcacataagCCAACCCTAAATATGCCAACTAATACTTATATGTA
ACAGCTTAGAGGGTTATAGTTACAAAAAATGGTATAGTTGCAGCCACAAA
ATGTACACtctttcttaaaataacactgtATTGTGTCAGATTGTGTTTGC
TTTGCATTAGGctttgcaaattttcatgttttaaaaacaaaacccaacct
ggaatgtgtaaattaataaattagtgattgaagtatgattgaagccacat
tttaagcccattgaaaaccctgcagccacaaattaaacccataagtatct
ttatccGACCTTTaaaactaccaatttcaagaaaaacggctaaaaaatat
tgaagtttcaaagcaggacagcacatataagccaacccgTTGAGTGAGCC
ACAGTGACATACAGCCACAAAACCTGCCCTCACTTTGAcatcttatattt
caagactgaatcactcaacttcaaagagggccacatttttggaaagctca
tcaACTTtcttattttatgaaattttgtacTACACAGCAGCCACAAGAAT
GTCAATGCTGTGGGCTAAAAAGTGGTTGTTATTGTGTTTATGGACTAATT
TCTCGCTTGTCTCTACACCCCAAAAATTAAGGGCATGTATACGTAAGAGT
CTTGCAAATTTAAGGGGGGAGTAAAACTTAAGGGGCACCTCAAAACCATC
TTTAAGCTTTTAAGGGGGGATAAATTGATAAGGGATGATTTGTGTTTTAA
GGGGGGACTCAAAATCATGGATGAAACCATGGCTCTGCTCGCTGccctac
tctaccattttagaatctcatATTTGCTGCATGAGTATTTTTGGTGAGTT
GCTTTGCGACAGAATAGCGGGTGAATAAAAGAGCGTGGTTGGACAATAAA
AATTTATGCGAGATCGTAAATTTCATAATGGCGGGAATTCATACGTTTCT
CGATGGCGCTGCTAGACATGTAACATCAAATTTAATGCATGACATCACAT
TTGGGCAGGGCACTAGTGTGACTATTTGTAgtaaatcaagctttcagaaa
aaaacatcatACAAATTGCAACAATAAGGAtaagagttacctgaatcaag
ttcaagatcccaagataattattttaaaacttgaaaactcaaAACGAAAC
AAAATGACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040608-exon-sc0002492-1491911889:17812..18971 | TCONS_00040608-exon-sc0002492-1491911889:17812..18971 | Clytia hemisphaerica | exon |
| TCONS_00040608-exon-sc0002492-1510915933:17812..18971 | TCONS_00040608-exon-sc0002492-1510915933:17812..18971 | Clytia hemisphaerica | exon |
| TCONS_00040608-exon-sc0002492-1575043694:17812..18971 | TCONS_00040608-exon-sc0002492-1575043694:17812..18971 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002492 | supercontig | sc0002492:17812..18971 . |
Blast
The following BLAST results are available for this feature:
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