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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040583 ID=TCONS_00040583|Name=TCONS_00040583|organism=Clytia hemisphaerica|type=transcript|length=1330bp
NTTTTAATCATCAATTTTAGCATGTCTACTGTAATCGGTTCCTTTTTCTT
TGCTTCCTTCCCAACCAATCTTTTTGCTGCCTCTAGAGCGTATTTCAAAA
TCGATGTCTGGACAAATTGATGGCCCAAAATcgcatgaaaatattttatt
gccATGATTGTAGACTCTATTACAGAAAAAGATTTATCTTGTTGTACGCA
TGAAACTATAAACAAAACGACATAGTGTTCTTTCGTGGGCATGGGACTAA
TCTCCCGAAATTGTTTACACCAGTTaatccattttttgaaatatccttCG
TACTTTTTATTTGTGCTTTCTGATCTTGCATGCTTTAAAAGTGCTGGTAC
CGAATTTACTAAAGAGTCCAATTTTGGACCGTAAACTTTGAAACNTCGTA
CTTTTTGTTTGTGCTTTCTGATCTTGCATGCTTTAAAACTGCTGGTACCG
AATTTACTAAAGAGTCCAATTTTGGATCGTAAActttgaaatatcttttc
atACCGCTTGCAATCAGACCTAAACAAAGTGATTTTCAATCATTAAAACG
TAAACCGGTATAACAAGATTAGAATCTCCCAAAATTGAACCTTTATATTC
CCCTTGCGAGATAAAAACTCTAGAATCTTTGTAAAAGATAGCTTCctgaa
caaaatctttaaaaacccCTTCTTCTTTAATTAAGTAAGGCCAAAATACT
GTAGAAGGCCAGAAAGGGACAATCAAAACACGTTTTGTCTTACCTTGAGA
CGCTAGGAAATGTTTAATTGTTTTGGGAATCAAATAGGGGGGAGGCACCA
TATAGCAAAATTCTCCAGACCAATCGAACGAAAAGGCATCTACCTTGAAA
CTCCCTGGAGAAAAATACCTTGAGCAAAAGCGTTCACATTTTGTGTTATT
ACTATCTGCAAATAAATCTATACTAAACTTGTCCCACTTTGTTTCCAAAC
TGTGCACAAAAGAAGATTTCACAAACCAATCGTTGTAATCTGTTGTTTTG
CTTACCTTGTCAGCTTGTCCATTTTTGTCTCTAGAAATCCATGTGACAGT
TAATTTCACATCCTTTTTCTTACATGATAAATATATTTTGTTCGCTTAAC
CTTGCAACAAATCTTTATTGCTACCTACCCTGATAATGATCGCTGTGCTT
ATATTGTCTGTGTGCCATAAAATCGTTTTACTATCTAACATTTCGTCAAA
AGAGTCTATCGCATATTTAATAGCCAATAATTCTCTAAAGGTAGAACTTT
CTTCTATTTCTAACCGCTTCAAgtttctacagggtgtccctaataaatgt
atcgagtttgaacatgcgattgagtagaaa Run BLAST on NCBI transcript from alignment at sc0002480:11456..12785 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040583 ID=TCONS_00040583|Name=TCONS_00040583|organism=Clytia hemisphaerica|type=transcript|length=1330bp|location=Sequence derived from alignment at sc0002480:11456..12785 (Clytia hemisphaerica)
tttctactcaatcgcatgttcaaactcgatacatttattagggacaccct
gtagaaacTTGAAGCGGTTAGAAATAGAAGAAAGTTCTACCTTTAGAGAA
TTATTGGCTATTAAATATGCGATAGACTCTTTTGACGAAATGTTAGATAG
TAAAACGATTTTATGGCACACAGACAATATAAGCACAGCGATCATTATCA
GGGTAGGTAGCAATAAAGATTTGTTGCAAGGTTAAGCGAACAAAATATAT
TTATCATGTAAGAAAAAGGATGTGAAATTAACTGTCACATGGATTTCTAG
AGACAAAAATGGACAAGCTGACAAGGTAAGCAAAACAACAGATTACAACG
ATTGGTTTGTGAAATCTTCTTTTGTGCACAGTTTGGAAACAAAGTGGGAC
AAGTTTAGTATAGATTTATTTGCAGATAGTAATAACACAAAATGTGAACG
CTTTTGCTCAAGGTATTTTTCTCCAGGGAGTTTCAAGGTAGATGCCTTTT
CGTTCGATTGGTCTGGAGAATTTTGCTATATGGTGCCTCCCCCCTATTTG
ATTCCCAAAACAATTAAACATTTCCTAGCGTCTCAAGGTAAGACAAAACG
TGTTTTGATTGTCCCTTTCTGGCCTTCTACAGTATTTTGGCCTTACTTAA
TTAAAGAAGAAGgggtttttaaagattttgttcagGAAGCTATCTTTTAC
AAAGATTCTAGAGTTTTTATCTCGCAAGGGGAATATAAAGGTTCAATTTT
GGGAGATTCTAATCTTGTTATACCGGTTTACGTTTTAATGATTGAAAATC
ACTTTGTTTAGGTCTGATTGCAAGCGGTatgaaaagatatttcaaagTTT
ACGATCCAAAATTGGACTCTTTAGTAAATTCGGTACCAGCAGTTTTAAAG
CATGCAAGATCAGAAAGCACAAACAAAAAGTACGANGTTTCAAAGTTTAC
GGTCCAAAATTGGACTCTTTAGTAAATTCGGTACCAGCACTTTTAAAGCA
TGCAAGATCAGAAAGCACAAATAAAAAGTACGaaggatatttcaaaaaat
ggattAACTGGTGTAAACAATTTCGGGAGATTAGTCCCATGCCCACGAAA
GAACACTATGTCGTTTTGTTTATAGTTTCATGCGTACAACAAGATAAATC
TTTTTCTGTAATAGAGTCTACAATCATggcaataaaatattttcatgcgA
TTTTGGGCCATCAATTTGTCCAGACATCGATTTTGAAATACGCTCTAGAG
GCAGCAAAAAGATTGGTTGGGAAGGAAGCAAAGAAAAAGGAACCGATTAC
AGTAGACATGCTAAAATTGATGATTAAAAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040583-exon-sc0002480-1491911889:11456..12785 | TCONS_00040583-exon-sc0002480-1491911889:11456..12785 | Clytia hemisphaerica | exon |
| TCONS_00040583-exon-sc0002480-1510915933:11456..12785 | TCONS_00040583-exon-sc0002480-1510915933:11456..12785 | Clytia hemisphaerica | exon |
| TCONS_00040583-exon-sc0002480-1575043694:11456..12785 | TCONS_00040583-exon-sc0002480-1575043694:11456..12785 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002480 | supercontig | sc0002480:11456..12785 . |
Blast
The following BLAST results are available for this feature:
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