TCONS_00040563 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040563
Unique NameTCONS_00040563
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1296

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040563 ID=TCONS_00040563|Name=TCONS_00040563|organism=Clytia hemisphaerica|type=transcript|length=1296bp
ACCAGAGTCAGTGGGATGGATGTTGGATTAATTGTTGTCAACAAACCATC
TGGTAAAGGCAAAGCTTCAATGCCAAGAGACCTTGTGAACGGAGCTGGTC
CAATCAGGAACTTATTGGAGATTCTCAAAGGTTCCATGGGGTCAAATTTC
CCATCCACTGTCGCTTCATTTGCTGCTGCTGCAATTGCAATGCATTTCTC
AACAGTAAAGTCAGTAAAGCAAGGTGTCCCAGTTCCAGCATTGGTAGGGG
AACCTGGATCAGGAAAATCAAGTATTGCTGTTTTGGCAATGGAAGCCATT
GGTGTCCATACCGCTCATGAAAATTGTACTTATAATGGAATGCTGAAAAT
ACTTGAAAAAGATTGTATACCAATACTATGGGAAGATGTCGATCAGTTTA
AAATATGTGAGCAGATCTCgatgcaaattttcaatcagGGCAAGAAAGTC
ACAGCAGTAAGTTCGGGAAATCCACCGAAGTCTCTTCCCATAATAACCAG
CAATGGATTTCTCAAAGATGCGCCATCTGAGATGAATGTTAAAAGATTGA
TTGGAAGAATGGTTATTATACCATTTCAAAAAGTAGTCTCAAAAATTGAA
AGCGTGCAAAGTTTACTGGAGTTCGAGTCGATGCTCCTGTCAAATAAACA
CATCGCAACCAATTGTTTCAGCTATTTTCTGCAGCTGAAGAACCATATTG
CTGATTTCAGCTTGAACAAAACAGATTTCACACTGCTTAATGATATTTTG
CTGGACGATTATGAAAACCATCAAGCTGACCAACGGACAATTAAGAACTA
CAATTGTCTAATGTTTCTAATGAAAAAAATCCTGGAAGATAGTGGCTGTA
CCAATGAAGAAATATCATCGATCCTCAAAAGCTTCTTTGACCAAGCCATC
CAAGCACATGACCCGGAGGCACATGGGTTTGGAAACGAAATTGAAATGAA
AGGCAAAGAAGCACTGACAAATAAATTAACTGAAGCATGCACCTCTCCAA
CAAAGTTTCCATGGTTGCGCATTAGTGCGCGCAACTGTTCTTCATGTGGA
GAGGTGCTCATGTTTAACTACACGAAGATTTGTGAGGGGCTAAGCAATCA
AACTCACAAAAGTGTGAAGAAATTTATTGCCCAAAATGGGTGCATGAGGC
GTACTCTGAAGTACTGGGTGGATGGTAAGCAAAAGCCGTGCTTCCATATC
AAATTGGCTTCAATAGATGATGATATTGtcacaaaaattaaaagtaaGCT
ATGGTTTGAATTGTTAcgttttattacttttttgagaatttttcag
Run BLAST on NCBI

protein sequence of TCONS_00040563-protein

>TCONS_00040563-protein ID=TCONS_00040563-protein|Name=TCONS_00040563-protein|organism=Clytia hemisphaerica|type=polypeptide|length=432bp
TRVSGMDVGLIVVNKPSGKGKASMPRDLVNGAGPIRNLLEILKGSMGSNF
PSTVASFAAAAIAMHFSTVKSVKQGVPVPALVGEPGSGKSSIAVLAMEAI
GVHTAHENCTYNGMLKILEKDCIPILWEDVDQFKICEQISMQIFNQGKKV
TAVSSGNPPKSLPIITSNGFLKDAPSEMNVKRLIGRMVIIPFQKVVSKIE
SVQSLLEFESMLLSNKHIATNCFSYFLQLKNHIADFSLNKTDFTLLNDIL
LDDYENHQADQRTIKNYNCLMFLMKKILEDSGCTNEEISSILKSFFDQAI
QAHDPEAHGFGNEIEMKGKEALTNKLTEACTSPTKFPWLRISARNCSSCG
EVLMFNYTKICEGLSNQTHKSVKKFIAQNGCMRRTLKYWVDGKQKPCFHI
KLASIDDDIVTKIKSKLWFELLRFITFLRIFQ
Run BLAST on NCBI

transcript from alignment at sc0002472:7439..11944+

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040563 ID=TCONS_00040563|Name=TCONS_00040563|organism=Clytia hemisphaerica|type=transcript|length=4506bp|location=Sequence derived from alignment at sc0002472:7439..11944+ (Clytia hemisphaerica)
ACCAGAGTCAGTGGGATGGATGTTGGATTAATTGTTGTCAACAAACCATC TGGTAAAGGCAAAGCTTCAATGCCAAGTAGGTACACCTTTTTAAACTgca aataatttaaaatattagtAGTGACTCCTAAAAGTTAACATTTGATACTA GGGAAtcaaatcattttgatttgtaatttaattgaattaatcaaaatttc caTCCTTTTCTTGATTAGTTCCATTAGTTCAATTTATTGTTTGATGACTT TTGAGGGGATGTAGAAGAATTATGTAATTACGGAAATCTACTCTTTTACT CTCAGAAATATTACAAAATATTACCCGTATTTCTTCTGGAAATCTAGAAT TTGTTTGGTTTGCAAATAGATCCAGGGATAACTGGTTAAGATGTAATGAG TGTgaagaaaatttgtttcaacaattttgcaaaattagcaatttttcact taaataattgaacattaaaaaatggcaacaaatttccttttcaaaatCTA TGACACTGTGATCCTCTATTCCCTAGAATGAAAACTAACCTTGGTATGTC TTTATATTGCCTACAGGAGACCTTGTGAACGGAGCTGGTCCAATCAGGAA CTTATTGGAGATTCTCAAAGGTTCCATGGGGTCAAATTTCCCATCCACTG TCGCTTCATTTGCTGCTGCTGCAATTGCAATGCATTTCTCAACAGTAAAG TCAGTAAAGCAAGGTGTCCCAGTTCCAGCATTGGTAGGGGAACCTGGATC AGGAAAATCAAGTATTGCTGTTTTGGCAATGGAAGCCATTGGTGTCCATA CCGCTCATGAAAGTAAGTtgttttcataaaatttgattttcagctCTTAC TTTTTAGCAATGTATATTCCTCATTCCTTTTGAAATGCAAATGCAGAAAC TCAAAGAAATAAGCCTTAAACCATAATGCTTAAACGGGGGGGTCAAAATA AACAGGTggtagaaaattttcaaattttaataaatgagGGTCTTAATAAG GTCCAgaggttggaaaaaattaacaagcgggggggggggttaatcAACGC CTGAGAGTAACACCCTAAGAGCCCAATTTTGAAAGACTGATTTTGAAGTA AGTTAcacagttttttttatataagaattcttttataagaatcacaaaac tcaaattggcaaaattttgagaattttttaggAATAATGCTGAGccttgt tcaaattttttttttcagtcaaaatttttgtttctttcctctttttcgca catttaaaaaaaattatccttgctttctttttcaaatttaaaaatcatat GAGGCTCATTTCGATTTATGTAATCGTTATAAAATACTGTTCGATTTATG TTTAGATTGTACTTATAATGGAATGCTGAAAATACTTGAAAAAGATTGTA TACCAATACTATGGGAAGATGTCGATCAGTTTAAAATATGTGAGCAGATC TCgatgcaaattttcaatcagGTAATTAAAAGTCAATATGTCCATGAATA AGGAAATCTGAATAACATTATTTCATATGGCAATAATTTTAAGTTCTTTA AAGAGAGATTTTTGGGATACATTTGGTTTCATTTTTTGTACATGTTGCAA TTCTGTGTAATTGTGACTAAAAACTTAACAGCAAATTCTCGCTTTTCTTT TTATCGTTCAATTTCCGTCtttgaatgttgaaaaaagaacCCAATCAGAA ATCATCATTTAATTCATTTTCTCTCTGACATTTTTAATTACAAGAGTAAG AAAAAATACatctaaaaacataaaaaaaacaaaagaaaatgaaattataa cCTGTAAATCTCTGTAAAAACTTTATCTCTCCACTGCTAAGTTTTTGATC ATACAATTACAATAgtaatttaagaacatttggTATTTTCAGGGCAAGAA AGTCACAGCAGTAAGTTCGGGAAATCCACCGAAGTCTCTTCCCATAATAA CCAGCAATGGATTTCTCAAAGATGCGCCATCTGAGATGAATGTTAAAAGG TAAGGATCATTTGTAATAGTTTCTCTTTGACTGAATTTTGATTACTTTTT TAATGCAGAGTAGTAAAAAACACTGCtaatttgtttttgtatattatACA ATGTTGCAAGTAACTCAAAAAATTGCCAggtcatttcatttttttatgaa tgtCATATCAATAGTTCAATCAATAGTTCTCTGGGCTCTTTCGGCTAATC AGGGTTTGTGAAAAGAGGATGGCAAATGAGCTAATTAATCAttataaata caaagaaaaactatcaaatctctttcaaattgaattattttGTGTGTTAT AGCATTGGGCACATAAAAGTAAGTAGTTCATGATACATTTGAAAGTGCAA ATCTAATGATTTCAACACATTTAAAATAGGACGATGAAGTGTCACATCTC TTGGGAGTACGTAATTATTCCACTTCCACTTtagatacgagttttgattt gattgtttgaagtttttgaagaaaaaaatttcttctttaaaatggcaata aagtTAAGTCCAGCCTTACATGATTCTTTTGGAGGAAGTCAGACTTCTGA GTTTATTTATCAATTTCTGTTTTATAGATTGATTGGAAGAATGGTTATTA TACCATTTCAAAAAGTAGTCTCAAAAATTGAAAGCGTGCAAAGTTTACTG GAGTTCGAGTCGATGCTCCTGTCAAATAAACACATCGCAACCAATTGTTT CAGCTATTTTCTGCAGCTGAAGAACCATATTGCTGATTTCAGCTTGAACA AAACAGATTTCACACTGCTTAATGATATTTTGCTGGACGATTATGAAAAC CATCAAGCTGACCAACGGACAATTAAGAACTACAATTGTCTAATGTTTCT AATGAAAAAAGTGAGTTTGAATTGCAATTTTTCTCTTGTATGCAGTTGAT ATAATTTTCAAGCACTGTTTTACCACTGTTATTGGGTGATAAAAACTCAA TTTTGTGTGTGAGGAGATTCTTTGTTTACTGAAAAATACCGGAAAAGAGT GTATGTAACACTACAATCAGAATTCACCGGTTCTCAGACCACCATGAAAA CTTCTCAAAATTTCaactgatttttgccaaaatcctagggatattctcaa cttcagttgagctagtaTCTGACTAAATATGTATGTCTGTCTGAAAAACT TTTGGGCAGCTTGGAGACCTCAAAAATAatctgatttggctgaaattttg cacatttgttccttgggtgaatacctggggctgttttttccatgttttaa aaattttcatttttgaggcCTGGTGACGAGTTTTCGCACCAAAACACGAA GCTTAAACTTTCAGTCCCAAAAAAAATAGTTATTAGCATATTTTAAAGAA TACTGAAATTATGTGTCTTACAAAGTTTACAATTGGGCTTCCAAATAATT TGAAAGATACTGAAGTTGAGCCTAAACAATAGTTTTGAAGTTTAAAACAC AAACTATTGTAATTGTAATTTTATTTAGATCCTGGAAGATAGTGGCTGTA CCAATGAAGAAATATCATCGATCCTCAAAAGCTTCTTTGACCAAGCCATC CAAGCACATGACCCGGAGGCACATGGGTTTGGAAACGAAATTGAAATGAA AGGCAAAGAAGCACTGACAAATAAATTAACTGAAGCATGCACCTCTCCAA CAGTAAGTACTACTTGTAAAAAAAGTCAAAACAATTGTTCACAGGAATGC TTGTTTTTAATTAATCACATTGTGTCAAAAGTTTGATTGTTTAGTGTCAT GACACATGGTTTGCATGTTTTACTAGTACTTATTTATGTCCCTTTAACCC TATTTGGCACATCCccctgtaaatttatttttaaggttttgaatTGCTGC TATTGTCTTAAAGTTTCAGAAGTTATATTTAGcctcatttttaaaaataa tttttgtcaacCCACATTTggtgaattttaaaaattaaacccAATTTTAC AAGGTAAAAGGCtggctttttttgaaaactagaatCTCTGATATCTTTCC AACCAATAAAGAAACAGTTGAATTTTCTCAATATTATAGCATTATTCCCT CCCCCATTATTTTTTGCACATGTCAAAAAATGTGTTGGTTTCTTATGAAA TAAGTTTTGGTATCCTTGTGACTTGTCCGCGTATTTTactattgtttcca tttttttgtatttatatctgaataatttttttatcgGGTTGCTTATTCAT TGTTTATTTTAGAAGTTTCCATGGTTGCGCATTAGTGCGCGCAACTGTTC TTCATGTGGAGAGGTGCTCATGTTTAACTACACGAAGATTTGTGAGGGGC TAAGCAATCAAACTCACAAAAGTGTGAAGAAATTTATTGCCCAAAATGGG TGCATGAGGCGTACTCTGAAGTACTGGGTGGATGGTAAGCAAAAGCCGTG CTTCCATATCAAATTGGCTTCAATAGATGATGATATTGtcacaaaaatta aaagtaaGCTATGGTTTGAATTGTTAcgttttattacttttttgagaatt tttcag

Coding sequence (CDS) from alignment at sc0002472:7439..11944+

>TCONS_00040563 ID=TCONS_00040563|Name=TCONS_00040563|organism=Clytia hemisphaerica|type=CDS|length=9072bp|location=Sequence derived from alignment at sc0002472:7439..11944+ (Clytia hemisphaerica)
ACCAGAGTCAGTGGGATGGATGTTGGATTAATTGTTGTCAACAAACCATC
TGGTAAAGGCAAAGCTTCAATGCCAAGAGACCTTGTGAACGGAGCTGGTC
CAATCAGGAACTTATTGGAGATTCTCAAAGGTTCCATGGGGTCAAATTTC
CCATCCACTGTCGCTTCATTTGCTGCTGCTGCAATTGCAATGCATTTCTC
AACAGTAAAGTCAGTAAAGCAAGGTGTCCCAGTTCCAGCATTGGTAGGGG
AACCTGGATCAGGAAAATCAAGTATTGCTGTTTTGGCAATGGAAGCCATT
GGTGTCCATACCGCTCATGAAAATTGTACTTATAATGGAATGCTGAAAAT
ACTTGAAAAAGATTGTATACCAATACTATGGGAAGATGTCGATCAGTTTA
AAATATGTGAGCAGATCTCgatgcaaattttcaatcagGGCAAGAAAGTC
ACAGCAGTAAGTTCGGGAAATCCACCGAAGTCTCTTCCCATAATAACCAG
CAATGGATTTCTCAAAGATGCGCCATCTGAGATGAATGTTAAAAGATTGA
TTGGAAGAATGGTTATTATACCATTTCAAAAAGTAGTCTCAAAAATTGAA
AGCGTGCAAAGTTTACTGGAGTTCGAGTCGATGCTCCTGTCAAATAAACA
CATCGCAACCAATTGTTTCAGCTATTTTCTGCAGCTGAAGAACCATATTG
CTGATTTCAGCTTGAACAAAACAGATTTCACACTGCTTAATGATATTTTG
CTGGACGATTATGAAAACCATCAAGCTGACCAACGGACAATTAAGAACTA
CAATTGTCTAATGTTTCTAATGAAAAAAATCCTGGAAGATAGTGGCTGTA
CCAATGAAGAAATATCATCGATCCTCAAAAGCTTCTTTGACCAAGCCATC
CAAGCACATGACCCGGAGGCACATGGGTTTGGAAACGAAATTGAAATGAA
AGGCAAAGAAGCACTGACAAATAAATTAACTGAAGCATGCACCTCTCCAA
CAAAGTTTCCATGGTTGCGCATTAGTGCGCGCAACTGTTCTTCATGTGGA
GAGGTGCTCATGTTTAACTACACGAAGATTTGTGAGGGGCTAAGCAATCA
AACTCACAAAAGTGTGAAGAAATTTATTGCCCAAAATGGGTGCATGAGGC
GTACTCTGAAGTACTGGGTGGATGGTAAGCAAAAGCCGTGCTTCCATATC
AAATTGGCTTCAATAGATGATGATATTGtcacaaaaattaaaagtaaGCT
ATGGTTTGAATTGTTAcgttttattacttttttgagaatttttcagACCA
GAGTCAGTGGGATGGATGTTGGATTAATTGTTGTCAACAAACCATCTGGT
AAAGGCAAAGCTTCAATGCCAAGAGACCTTGTGAACGGAGCTGGTCCAAT
CAGGAACTTATTGGAGATTCTCAAAGGTTCCATGGGGTCAAATTTCCCAT
CCACTGTCGCTTCATTTGCTGCTGCTGCAATTGCAATGCATTTCTCAACA
GTAAAGTCAGTAAAGCAAGGTGTCCCAGTTCCAGCATTGGTAGGGGAACC
TGGATCAGGAAAATCAAGTATTGCTGTTTTGGCAATGGAAGCCATTGGTG
TCCATACCGCTCATGAAAATTGTACTTATAATGGAATGCTGAAAATACTT
GAAAAAGATTGTATACCAATACTATGGGAAGATGTCGATCAGTTTAAAAT
ATGTGAGCAGATCTCgatgcaaattttcaatcagGGCAAGAAAGTCACAG
CAGTAAGTTCGGGAAATCCACCGAAGTCTCTTCCCATAATAACCAGCAAT
GGATTTCTCAAAGATGCGCCATCTGAGATGAATGTTAAAAGATTGATTGG
AAGAATGGTTATTATACCATTTCAAAAAGTAGTCTCAAAAATTGAAAGCG
TGCAAAGTTTACTGGAGTTCGAGTCGATGCTCCTGTCAAATAAACACATC
GCAACCAATTGTTTCAGCTATTTTCTGCAGCTGAAGAACCATATTGCTGA
TTTCAGCTTGAACAAAACAGATTTCACACTGCTTAATGATATTTTGCTGG
ACGATTATGAAAACCATCAAGCTGACCAACGGACAATTAAGAACTACAAT
TGTCTAATGTTTCTAATGAAAAAAATCCTGGAAGATAGTGGCTGTACCAA
TGAAGAAATATCATCGATCCTCAAAAGCTTCTTTGACCAAGCCATCCAAG
CACATGACCCGGAGGCACATGGGTTTGGAAACGAAATTGAAATGAAAGGC
AAAGAAGCACTGACAAATAAATTAACTGAAGCATGCACCTCTCCAACAAA
GTTTCCATGGTTGCGCATTAGTGCGCGCAACTGTTCTTCATGTGGAGAGG
TGCTCATGTTTAACTACACGAAGATTTGTGAGGGGCTAAGCAATCAAACT
CACAAAAGTGTGAAGAAATTTATTGCCCAAAATGGGTGCATGAGGCGTAC
TCTGAAGTACTGGGTGGATGGTAAGCAAAAGCCGTGCTTCCATATCAAAT
TGGCTTCAATAGATGATGATATTGtcacaaaaattaaaagtaaGCTATGG
TTTGAATTGTTAcgttttattacttttttgagaatttttcagACCAGAGT
CAGTGGGATGGATGTTGGATTAATTGTTGTCAACAAACCATCTGGTAAAG
GCAAAGCTTCAATGCCAAGAGACCTTGTGAACGGAGCTGGTCCAATCAGG
AACTTATTGGAGATTCTCAAAGGTTCCATGGGGTCAAATTTCCCATCCAC
TGTCGCTTCATTTGCTGCTGCTGCAATTGCAATGCATTTCTCAACAGTAA
AGTCAGTAAAGCAAGGTGTCCCAGTTCCAGCATTGGTAGGGGAACCTGGA
TCAGGAAAATCAAGTATTGCTGTTTTGGCAATGGAAGCCATTGGTGTCCA
TACCGCTCATGAAAATTGTACTTATAATGGAATGCTGAAAATACTTGAAA
AAGATTGTATACCAATACTATGGGAAGATGTCGATCAGTTTAAAATATGT
GAGCAGATCTCgatgcaaattttcaatcagGGCAAGAAAGTCACAGCAGT
AAGTTCGGGAAATCCACCGAAGTCTCTTCCCATAATAACCAGCAATGGAT
TTCTCAAAGATGCGCCATCTGAGATGAATGTTAAAAGATTGATTGGAAGA
ATGGTTATTATACCATTTCAAAAAGTAGTCTCAAAAATTGAAAGCGTGCA
AAGTTTACTGGAGTTCGAGTCGATGCTCCTGTCAAATAAACACATCGCAA
CCAATTGTTTCAGCTATTTTCTGCAGCTGAAGAACCATATTGCTGATTTC
AGCTTGAACAAAACAGATTTCACACTGCTTAATGATATTTTGCTGGACGA
TTATGAAAACCATCAAGCTGACCAACGGACAATTAAGAACTACAATTGTC
TAATGTTTCTAATGAAAAAAATCCTGGAAGATAGTGGCTGTACCAATGAA
GAAATATCATCGATCCTCAAAAGCTTCTTTGACCAAGCCATCCAAGCACA
TGACCCGGAGGCACATGGGTTTGGAAACGAAATTGAAATGAAAGGCAAAG
AAGCACTGACAAATAAATTAACTGAAGCATGCACCTCTCCAACAAAGTTT
CCATGGTTGCGCATTAGTGCGCGCAACTGTTCTTCATGTGGAGAGGTGCT
CATGTTTAACTACACGAAGATTTGTGAGGGGCTAAGCAATCAAACTCACA
AAAGTGTGAAGAAATTTATTGCCCAAAATGGGTGCATGAGGCGTACTCTG
AAGTACTGGGTGGATGGTAAGCAAAAGCCGTGCTTCCATATCAAATTGGC
TTCAATAGATGATGATATTGtcacaaaaattaaaagtaaGCTATGGTTTG
AATTGTTAcgttttattacttttttgagaatttttcagACCAGAGTCAGT
GGGATGGATGTTGGATTAATTGTTGTCAACAAACCATCTGGTAAAGGCAA
AGCTTCAATGCCAAGAGACCTTGTGAACGGAGCTGGTCCAATCAGGAACT
TATTGGAGATTCTCAAAGGTTCCATGGGGTCAAATTTCCCATCCACTGTC
GCTTCATTTGCTGCTGCTGCAATTGCAATGCATTTCTCAACAGTAAAGTC
AGTAAAGCAAGGTGTCCCAGTTCCAGCATTGGTAGGGGAACCTGGATCAG
GAAAATCAAGTATTGCTGTTTTGGCAATGGAAGCCATTGGTGTCCATACC
GCTCATGAAAATTGTACTTATAATGGAATGCTGAAAATACTTGAAAAAGA
TTGTATACCAATACTATGGGAAGATGTCGATCAGTTTAAAATATGTGAGC
AGATCTCgatgcaaattttcaatcagGGCAAGAAAGTCACAGCAGTAAGT
TCGGGAAATCCACCGAAGTCTCTTCCCATAATAACCAGCAATGGATTTCT
CAAAGATGCGCCATCTGAGATGAATGTTAAAAGATTGATTGGAAGAATGG
TTATTATACCATTTCAAAAAGTAGTCTCAAAAATTGAAAGCGTGCAAAGT
TTACTGGAGTTCGAGTCGATGCTCCTGTCAAATAAACACATCGCAACCAA
TTGTTTCAGCTATTTTCTGCAGCTGAAGAACCATATTGCTGATTTCAGCT
TGAACAAAACAGATTTCACACTGCTTAATGATATTTTGCTGGACGATTAT
GAAAACCATCAAGCTGACCAACGGACAATTAAGAACTACAATTGTCTAAT
GTTTCTAATGAAAAAAATCCTGGAAGATAGTGGCTGTACCAATGAAGAAA
TATCATCGATCCTCAAAAGCTTCTTTGACCAAGCCATCCAAGCACATGAC
CCGGAGGCACATGGGTTTGGAAACGAAATTGAAATGAAAGGCAAAGAAGC
ACTGACAAATAAATTAACTGAAGCATGCACCTCTCCAACAAAGTTTCCAT
GGTTGCGCATTAGTGCGCGCAACTGTTCTTCATGTGGAGAGGTGCTCATG
TTTAACTACACGAAGATTTGTGAGGGGCTAAGCAATCAAACTCACAAAAG
TGTGAAGAAATTTATTGCCCAAAATGGGTGCATGAGGCGTACTCTGAAGT
ACTGGGTGGATGGTAAGCAAAAGCCGTGCTTCCATATCAAATTGGCTTCA
ATAGATGATGATATTGtcacaaaaattaaaagtaaGCTATGGTTTGAATT
GTTAcgttttattacttttttgagaatttttcagACCAGAGTCAGTGGGA
TGGATGTTGGATTAATTGTTGTCAACAAACCATCTGGTAAAGGCAAAGCT
TCAATGCCAAGAGACCTTGTGAACGGAGCTGGTCCAATCAGGAACTTATT
GGAGATTCTCAAAGGTTCCATGGGGTCAAATTTCCCATCCACTGTCGCTT
CATTTGCTGCTGCTGCAATTGCAATGCATTTCTCAACAGTAAAGTCAGTA
AAGCAAGGTGTCCCAGTTCCAGCATTGGTAGGGGAACCTGGATCAGGAAA
ATCAAGTATTGCTGTTTTGGCAATGGAAGCCATTGGTGTCCATACCGCTC
ATGAAAATTGTACTTATAATGGAATGCTGAAAATACTTGAAAAAGATTGT
ATACCAATACTATGGGAAGATGTCGATCAGTTTAAAATATGTGAGCAGAT
CTCgatgcaaattttcaatcagGGCAAGAAAGTCACAGCAGTAAGTTCGG
GAAATCCACCGAAGTCTCTTCCCATAATAACCAGCAATGGATTTCTCAAA
GATGCGCCATCTGAGATGAATGTTAAAAGATTGATTGGAAGAATGGTTAT
TATACCATTTCAAAAAGTAGTCTCAAAAATTGAAAGCGTGCAAAGTTTAC
TGGAGTTCGAGTCGATGCTCCTGTCAAATAAACACATCGCAACCAATTGT
TTCAGCTATTTTCTGCAGCTGAAGAACCATATTGCTGATTTCAGCTTGAA
CAAAACAGATTTCACACTGCTTAATGATATTTTGCTGGACGATTATGAAA
ACCATCAAGCTGACCAACGGACAATTAAGAACTACAATTGTCTAATGTTT
CTAATGAAAAAAATCCTGGAAGATAGTGGCTGTACCAATGAAGAAATATC
ATCGATCCTCAAAAGCTTCTTTGACCAAGCCATCCAAGCACATGACCCGG
AGGCACATGGGTTTGGAAACGAAATTGAAATGAAAGGCAAAGAAGCACTG
ACAAATAAATTAACTGAAGCATGCACCTCTCCAACAAAGTTTCCATGGTT
GCGCATTAGTGCGCGCAACTGTTCTTCATGTGGAGAGGTGCTCATGTTTA
ACTACACGAAGATTTGTGAGGGGCTAAGCAATCAAACTCACAAAAGTGTG
AAGAAATTTATTGCCCAAAATGGGTGCATGAGGCGTACTCTGAAGTACTG
GGTGGATGGTAAGCAAAAGCCGTGCTTCCATATCAAATTGGCTTCAATAG
ATGATGATATTGtcacaaaaattaaaagtaaGCTATGGTTTGAATTGTTA
cgttttattacttttttgagaatttttcagACCAGAGTCAGTGGGATGGA
TGTTGGATTAATTGTTGTCAACAAACCATCTGGTAAAGGCAAAGCTTCAA
TGCCAAGAGACCTTGTGAACGGAGCTGGTCCAATCAGGAACTTATTGGAG
ATTCTCAAAGGTTCCATGGGGTCAAATTTCCCATCCACTGTCGCTTCATT
TGCTGCTGCTGCAATTGCAATGCATTTCTCAACAGTAAAGTCAGTAAAGC
AAGGTGTCCCAGTTCCAGCATTGGTAGGGGAACCTGGATCAGGAAAATCA
AGTATTGCTGTTTTGGCAATGGAAGCCATTGGTGTCCATACCGCTCATGA
AAATTGTACTTATAATGGAATGCTGAAAATACTTGAAAAAGATTGTATAC
CAATACTATGGGAAGATGTCGATCAGTTTAAAATATGTGAGCAGATCTCg
atgcaaattttcaatcagGGCAAGAAAGTCACAGCAGTAAGTTCGGGAAA
TCCACCGAAGTCTCTTCCCATAATAACCAGCAATGGATTTCTCAAAGATG
CGCCATCTGAGATGAATGTTAAAAGATTGATTGGAAGAATGGTTATTATA
CCATTTCAAAAAGTAGTCTCAAAAATTGAAAGCGTGCAAAGTTTACTGGA
GTTCGAGTCGATGCTCCTGTCAAATAAACACATCGCAACCAATTGTTTCA
GCTATTTTCTGCAGCTGAAGAACCATATTGCTGATTTCAGCTTGAACAAA
ACAGATTTCACACTGCTTAATGATATTTTGCTGGACGATTATGAAAACCA
TCAAGCTGACCAACGGACAATTAAGAACTACAATTGTCTAATGTTTCTAA
TGAAAAAAATCCTGGAAGATAGTGGCTGTACCAATGAAGAAATATCATCG
ATCCTCAAAAGCTTCTTTGACCAAGCCATCCAAGCACATGACCCGGAGGC
ACATGGGTTTGGAAACGAAATTGAAATGAAAGGCAAAGAAGCACTGACAA
ATAAATTAACTGAAGCATGCACCTCTCCAACAAAGTTTCCATGGTTGCGC
ATTAGTGCGCGCAACTGTTCTTCATGTGGAGAGGTGCTCATGTTTAACTA
CACGAAGATTTGTGAGGGGCTAAGCAATCAAACTCACAAAAGTGTGAAGA
AATTTATTGCCCAAAATGGGTGCATGAGGCGTACTCTGAAGTACTGGGTG
GATGGTAAGCAAAAGCCGTGCTTCCATATCAAATTGGCTTCAATAGATGA
TGATATTGtcacaaaaattaaaagtaaGCTATGGTTTGAATTGTTAcgtt
ttattacttttttgagaatttttcagACCAGAGTCAGTGGGATGGATGTT
GGATTAATTGTTGTCAACAAACCATCTGGTAAAGGCAAAGCTTCAATGCC
AAGAGACCTTGTGAACGGAGCTGGTCCAATCAGGAACTTATTGGAGATTC
TCAAAGGTTCCATGGGGTCAAATTTCCCATCCACTGTCGCTTCATTTGCT
GCTGCTGCAATTGCAATGCATTTCTCAACAGTAAAGTCAGTAAAGCAAGG
TGTCCCAGTTCCAGCATTGGTAGGGGAACCTGGATCAGGAAAATCAAGTA
TTGCTGTTTTGGCAATGGAAGCCATTGGTGTCCATACCGCTCATGAAAAT
TGTACTTATAATGGAATGCTGAAAATACTTGAAAAAGATTGTATACCAAT
ACTATGGGAAGATGTCGATCAGTTTAAAATATGTGAGCAGATCTCgatgc
aaattttcaatcagGGCAAGAAAGTCACAGCAGTAAGTTCGGGAAATCCA
CCGAAGTCTCTTCCCATAATAACCAGCAATGGATTTCTCAAAGATGCGCC
ATCTGAGATGAATGTTAAAAGATTGATTGGAAGAATGGTTATTATACCAT
TTCAAAAAGTAGTCTCAAAAATTGAAAGCGTGCAAAGTTTACTGGAGTTC
GAGTCGATGCTCCTGTCAAATAAACACATCGCAACCAATTGTTTCAGCTA
TTTTCTGCAGCTGAAGAACCATATTGCTGATTTCAGCTTGAACAAAACAG
ATTTCACACTGCTTAATGATATTTTGCTGGACGATTATGAAAACCATCAA
GCTGACCAACGGACAATTAAGAACTACAATTGTCTAATGTTTCTAATGAA
AAAAATCCTGGAAGATAGTGGCTGTACCAATGAAGAAATATCATCGATCC
TCAAAAGCTTCTTTGACCAAGCCATCCAAGCACATGACCCGGAGGCACAT
GGGTTTGGAAACGAAATTGAAATGAAAGGCAAAGAAGCACTGACAAATAA
ATTAACTGAAGCATGCACCTCTCCAACAAAGTTTCCATGGTTGCGCATTA
GTGCGCGCAACTGTTCTTCATGTGGAGAGGTGCTCATGTTTAACTACACG
AAGATTTGTGAGGGGCTAAGCAATCAAACTCACAAAAGTGTGAAGAAATT
TATTGCCCAAAATGGGTGCATGAGGCGTACTCTGAAGTACTGGGTGGATG
GTAAGCAAAAGCCGTGCTTCCATATCAAATTGGCTTCAATAGATGATGAT
ATTGtcacaaaaattaaaagtaaGCTATGGTTTGAATTGTTAcgttttat
tacttttttgagaatttttcag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024686XLOC_024686Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040563-exon-sc0002472-1491911889:7439..7514TCONS_00040563-exon-sc0002472-1491911889:7439..7514Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1510915933:7439..7514TCONS_00040563-exon-sc0002472-1510915933:7439..7514Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1575043694:7439..7514TCONS_00040563-exon-sc0002472-1575043694:7439..7514Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1491911889:8005..8250TCONS_00040563-exon-sc0002472-1491911889:8005..8250Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1510915933:8005..8250TCONS_00040563-exon-sc0002472-1510915933:8005..8250Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1575043694:8005..8250TCONS_00040563-exon-sc0002472-1575043694:8005..8250Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1491911889:8794..8909TCONS_00040563-exon-sc0002472-1491911889:8794..8909Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1510915933:8794..8909TCONS_00040563-exon-sc0002472-1510915933:8794..8909Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1575043694:8794..8909TCONS_00040563-exon-sc0002472-1575043694:8794..8909Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1491911889:9331..9437TCONS_00040563-exon-sc0002472-1491911889:9331..9437Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1510915933:9331..9437TCONS_00040563-exon-sc0002472-1510915933:9331..9437Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1575043694:9331..9437TCONS_00040563-exon-sc0002472-1575043694:9331..9437Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1491911889:10016..10298TCONS_00040563-exon-sc0002472-1491911889:10016..10298Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1510915933:10016..10298TCONS_00040563-exon-sc0002472-1510915933:10016..10298Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1575043694:10016..10298TCONS_00040563-exon-sc0002472-1575043694:10016..10298Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1491911889:10917..11090TCONS_00040563-exon-sc0002472-1491911889:10917..11090Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1510915933:10917..11090TCONS_00040563-exon-sc0002472-1510915933:10917..11090Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1575043694:10917..11090TCONS_00040563-exon-sc0002472-1575043694:10917..11090Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1491911889:11651..11944TCONS_00040563-exon-sc0002472-1491911889:11651..11944Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1510915933:11651..11944TCONS_00040563-exon-sc0002472-1510915933:11651..11944Clytia hemisphaericaexon
TCONS_00040563-exon-sc0002472-1575043694:11651..11944TCONS_00040563-exon-sc0002472-1575043694:11651..11944Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040563-proteinTCONS_00040563-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002472supercontigsc0002472:7439..11944 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0326382 0.0954822 0 0 0.0440145 0.0347808 0.0419616 0 0.0550072 0.0681353 0.0661338 0.0217369 0.06512 0.0225426 0.129731 0.0994441 0.122507 0.0753394 0 0 0 0.0923529 0 0.136089 0.175211 0.0625487 0.0895069 0.0477621 0.108678 0.0738169
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040563 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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