TCONS_00040561 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040561
Unique NameTCONS_00040561
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length89

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040561 ID=TCONS_00040561|Name=TCONS_00040561|organism=Clytia hemisphaerica|type=transcript|length=89bp
TTTATTGGGAATTTTAATAGTTGTAGACTGTTTGAGGGGTTAATTGCGAG
ACATTAgctcaaaaatttgaattttggtcaaaaaatgag
Run BLAST on NCBI

transcript from alignment at sc0002470:13399..13487

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040561 ID=TCONS_00040561|Name=TCONS_00040561|organism=Clytia hemisphaerica|type=transcript|length=89bp|location=Sequence derived from alignment at sc0002470:13399..13487 (Clytia hemisphaerica)
ctcattttttgaccaaaattcaaatttttgagcTAATGTCTCGCAATTAA
CCCCTCAAACAGTCTACAACTATTAAAATTCCCAATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024684XLOC_024684Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040561-exon-sc0002470-1491911889:13399..13487TCONS_00040561-exon-sc0002470-1491911889:13399..13487Clytia hemisphaericaexon
TCONS_00040561-exon-sc0002470-1510915933:13399..13487TCONS_00040561-exon-sc0002470-1510915933:13399..13487Clytia hemisphaericaexon
TCONS_00040561-exon-sc0002470-1575043694:13399..13487TCONS_00040561-exon-sc0002470-1575043694:13399..13487Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002470supercontigsc0002470:13399..13487 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040561 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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