TCONS_00040557 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040557
Unique NameTCONS_00040557
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length102

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040557 ID=TCONS_00040557|Name=TCONS_00040557|organism=Clytia hemisphaerica|type=transcript|length=102bp
ACTTCCCACCTCCAAGTATCAAATGTTTCTTTCAACGCAAATTTTACAAT
GATGCTTGTCAGAATCAAAGCCAGCAAAACTGACCCATTTCGTCAGGGAA
NN
Run BLAST on NCBI

transcript from alignment at sc0002469:17619..17720

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040557 ID=TCONS_00040557|Name=TCONS_00040557|organism=Clytia hemisphaerica|type=transcript|length=102bp|location=Sequence derived from alignment at sc0002469:17619..17720 (Clytia hemisphaerica)
NNTTCCCTGACGAAATGGGTCAGTTTTGCTGGCTTTGATTCTGACAAGCA
TCATTGTAAAATTTGCGTTGAAAGAAACATTTGATACTTGGAGGTGGGAA
GT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024680XLOC_024680Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040557-exon-sc0002469-1491911889:17619..17720TCONS_00040557-exon-sc0002469-1491911889:17619..17720Clytia hemisphaericaexon
TCONS_00040557-exon-sc0002469-1510915933:17619..17720TCONS_00040557-exon-sc0002469-1510915933:17619..17720Clytia hemisphaericaexon
TCONS_00040557-exon-sc0002469-1575043694:17619..17720TCONS_00040557-exon-sc0002469-1575043694:17619..17720Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002469supercontigsc0002469:17619..17720 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040557 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top