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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040555 ID=TCONS_00040555|Name=TCONS_00040555|organism=Clytia hemisphaerica|type=transcript|length=968bp
ctccggctttgggaagtagcgatggttttggttgttttcgatggaaaata
gtaagaaacttaagtttaaaagtcatttagtttttgctagCTTTATAGGA
TGGCAGAATCCTGGATGGTTTACCTAACTGCATAACATAAACCTAATCAC
CAAAATAACAAACTGTGAGGACGTTAACGACAAATACAACCAATTTCATG
AACATCTCTCCAGAGTAATTGATAAATATGCACCTTTGAAAGAAATTAAA
CCGAAAAATAACTACGATCTGAAGCCATGGATAAAtgacaatataatttc
tatgaTAAAAACTAAACATATTCTCTCNGGCTCTCACTAAGAAATATAAA
TCTTGTTGTATTTTCCTCGACCTAGCAAAAGCGTTTGACACAGTCAGTCA
TGAGATTCTCCTTCAAAAACTTAAATACTATGGTGTGAGAGGAGTTACAA
ACGATTGGTTCTGTTCCTATCTCAGTAACAGGAAGCAatgtgtcaaaatt
tcaaattccttATCAAACCCATTAACTATAAACTGTGGTGTACCCCAGGG
ATCAATCCTTGGCCCCCTTCTGTTCATCATATATATCAATGACATTTTAA
AATCCtctaaaacttttgaattcGTCCAGTTCGCTGATGACACCTGtctt
ttcttaaaagaaaaggATAAGAAATCACTTACAGACACTACAAACACAGA
ACTCTCGAAAATAAGTGACTGGCTTGTGTCAAACGAACTTAGTagtaatt
tcatcaaaaatggtttcagatagggtcctgaaatcttttggtgtttatag
tattctggatatactctgggagaaccaaaatggttcgggttagaaatttg
ccaaagttcgccattatggaattgcatttcccaccaaaacgcaatattta
gagctaaactctaattttctcaggctaaaatctcaaaagtggtttcaaat
agggtcctgaaatctttt Run BLAST on NCBI transcript from alignment at sc0002468:9271..10238 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040555 ID=TCONS_00040555|Name=TCONS_00040555|organism=Clytia hemisphaerica|type=transcript|length=968bp|location=Sequence derived from alignment at sc0002468:9271..10238 (Clytia hemisphaerica)
aaaagatttcaggaccctatttgaaaccacttttgagattttagcctgag
aaaattagagtttagctctaaatattgcgttttggtgggaaatgcaattc
cataatggcgaactttggcaaatttctaacccgaaccattttggttctcc
cagagtatatccagaatactataaacaccaaaagatttcaggaccctatc
tgaaaccatttttgatgaaattactACTAAGTTCGTTTGACACAAGCCAG
TCACTTATTTTCGAGAGTTCTGTGTTTGTAGTGTCTGTAAGTGATTTCTT
ATccttttcttttaagaaaagaCAGGTGTCATCAGCGAACTGGACgaatt
caaaagttttagaGGATTTTAAAATGTCATTGATATATATGATGAACAGA
AGGGGGCCAAGGATTGATCCCTGGGGTACACCACAGTTTATAGTTAATGG
GTTTGATaaggaatttgaaattttgacacatTGCTTCCTGTTACTGAGAT
AGGAACAGAACCAATCGTTTGTAACTCCTCTCACACCATAGTATTTAAGT
TTTTGAAGGAGAATCTCATGACTGACTGTGTCAAACGCTTTTGCTAGGTC
GAGGAAAATACAACAAGATTTATATTTCTTAGTGAGAGCCNGAGAGAATA
TGTTTAGTTTTTAtcatagaaattatattgtcaTTTATCCATGGCTTCAG
ATCGTAGTTATTTTTCGGTTTAATTTCTTTCAAAGGTGCATATTTATCAA
TTACTCTGGAGAGATGTTCATGAAATTGGTTGTATTTGTCGTTAACGTCC
TCACAGTTTGTTATTTTGGTGATTAGGTTTATGTTATGCAGTTAGGTAAA
CCATCCAGGATTCTGCCATCCTATAAAGctagcaaaaactaaatgacttt
taaacttaagtttcttactattttccatcgaaaacaaccaaaaccatcgc
tacttcccaaagccggag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040555-exon-sc0002468-1491911889:9271..10238 | TCONS_00040555-exon-sc0002468-1491911889:9271..10238 | Clytia hemisphaerica | exon |
| TCONS_00040555-exon-sc0002468-1510915933:9271..10238 | TCONS_00040555-exon-sc0002468-1510915933:9271..10238 | Clytia hemisphaerica | exon |
| TCONS_00040555-exon-sc0002468-1575043694:9271..10238 | TCONS_00040555-exon-sc0002468-1575043694:9271..10238 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002468 | supercontig | sc0002468:9271..10238 . |
Blast
The following BLAST results are available for this feature:
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