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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040552 ID=TCONS_00040552|Name=TCONS_00040552|organism=Clytia hemisphaerica|type=transcript|length=1044bp
GCGAAATTTCTGGATTTTGAAAGATCGGAACGAAAAATTCCCaaatttcc
cgaaaaaaatttccaataaaatcggattttacgagaaaatttccccgatt
ttccgattttccgattttgaaaaatcggattatcagggaaaattttttcc
gacttggagctctcccgcatttttgtgaggcgaagttgacagctatgaaA
ATAGTCTGGGACCTTCTTCTGACAGAGAGTCTCTCCATATGTTTTTTTGC
CTTATGTTCACCTCTTTTAGATAACATTTTCTACCCAGTCTCTGGTTATC
GTAACTGAAGATGCCACCTTTGTTTTCAGCATANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACTTGACAATCTCTTGTTTT
GAACGTTCGATGGATCCAAGCAATGATACTTTTGACTTTCTCGATCTGGT
TTGTGATGTGTTTGCTGTATGTCATGTTAACATTAACTTTGCATTCCAAG
GTACCAATATCACCTTTTTAGGAAGGAAGGTGTCTCTTAGAATCAAACCA
AACTTTCTTGACTGCTTGAACGTTATAATGTAGAAGAAGTTGAAGAATGA
CCAGTCagttaaaaaattttcagcaaagGATTGAGAACTCAAAGCAGTAG
CAATTGTCCAGAAGATAGAGCTTTATATAACTTTGGGGAACAGTTTGAAG
TCCAGCGGTTGTGTGTGACATCAAGTTTTTAGCAGGCTGATAGGCTGGAT
TTGTACGTACAAATATATAGTTGATGATGAAGAGCAGAAATTGGATCTCG
TTGCTTAGTTGTAGcatttgaaattggaaaaataaataaagatttcttcT
GTTATGCTTTGGCAGGTGGAGGGGTAAATTTCTTTGAGCTTGTCAGAGCA
GTCTTTTTCTCGTGTTTGTAGCTTTGCTAGCTTTGACATATTATAACTTT
GGCTTCTTCGCACTTGATGGTGGCACCAcagaaacactgaaaaacatgaa
aaagaaatatggttacATGCTGTTCATTGTAATGGTTACTTTGG Run BLAST on NCBI transcript from alignment at sc0002467:18125..19168 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040552 ID=TCONS_00040552|Name=TCONS_00040552|organism=Clytia hemisphaerica|type=transcript|length=1044bp|location=Sequence derived from alignment at sc0002467:18125..19168 (Clytia hemisphaerica)
CCAAAGTAACCATTACAATGAACAGCATgtaaccatatttctttttcatg
tttttcagtgtttctgTGGTGCCACCATCAAGTGCGAAGAAGCCAAAGTT
ATAATATGTCAAAGCTAGCAAAGCTACAAACACGAGAAAAAGACTGCTCT
GACAAGCTCAAAGAAATTTACCCCTCCACCTGCCAAAGCATAACAgaaga
aatctttatttatttttccaatttcaaatgCTACAACTAAGCAACGAGAT
CCAATTTCTGCTCTTCATCATCAACTATATATTTGTACGTACAAATCCAG
CCTATCAGCCTGCTAAAAACTTGATGTCACACACAACCGCTGGACTTCAA
ACTGTTCCCCAAAGTTATATAAAGCTCTATCTTCTGGACAATTGCTACTG
CTTTGAGTTCTCAATCctttgctgaaaattttttaactGACTGGTCATTC
TTCAACTTCTTCTACATTATAACGTTCAAGCAGTCAAGAAAGTTTGGTTT
GATTCTAAGAGACACCTTCCTTCCTAAAAAGGTGATATTGGTACCTTGGA
ATGCAAAGTTAATGTTAACATGACATACAGCAAACACATCACAAACCAGA
TCGAGAAAGTCAAAAGTATCATTGCTTGGATCCATCGAACGTTCAAAACA
AGAGATTGTCAAGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTATGCTGAAAACAAAGGTGGCATCTTCAGTTACGATAAC
CAGAGACTGGGTAGAAAATGTTATCTAAAAGAGGTGAACATAAGGCAAAA
AAACATATGGAGAGACTCTCTGTCAGAAGAAGGTCCCAGACTATTttcat
agctgtcaacttcgcctcacaaaaatgcgggagagctccaagtcggaaaa
aattttccctgataatccgatttttcaaaatcggaaaatcggaaaatcgg
ggaaattttctcgtaaaatccgattttattggaaatttttttcgggaaat
ttGGGAATTTTTCGTTCCGATCTTTCAAAATCCAGAAATTTCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040552-exon-sc0002467-1491911889:18125..19168 | TCONS_00040552-exon-sc0002467-1491911889:18125..19168 | Clytia hemisphaerica | exon |
| TCONS_00040552-exon-sc0002467-1510915933:18125..19168 | TCONS_00040552-exon-sc0002467-1510915933:18125..19168 | Clytia hemisphaerica | exon |
| TCONS_00040552-exon-sc0002467-1575043694:18125..19168 | TCONS_00040552-exon-sc0002467-1575043694:18125..19168 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002467 | supercontig | sc0002467:18125..19168 . |
Blast
The following BLAST results are available for this feature:
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