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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040496 ID=TCONS_00040496|Name=TCONS_00040496|organism=Clytia hemisphaerica|type=transcript|length=1465bp
caTATTGTGATTGGTGAAACATGGTGAACCTGGGTGAACTTGAAAATTTG
ACTACTACTGTCTTGGTAGTGGAAGTCGAGTGAGAAATTGAAACTGAAAG
TGAACCGATTTATTCCGATTCGGAATCAGTAAACAAACAACCCCTCTATC
ATATTCGCACTCTTATTTTCTTATCTCACTTGATGGGGTCGATAGTAAGT
CAGTTTTACTGTCATTGACCTTTACATGAGAAGTACAATTACTTGTTTCA
CTGTTCTTTAGCAAATGGAAAACAAGCGCACGAAGTCTATTGACGAAGAA
AGTTATAAGTTCATAGAGTATTGTGAAAAATGTCATGCTATTTGGCCAAT
CGATCAAAATATTACGTCCTGCAGCACTACAAACTGTGAAGGgtaaatct
ttaaagcattgctgtttgtttgaaaagtagtcattgaaattaaaatttcg
aaaagcaaaacaatttgCGTAATACCATTATAAGCGACTTTACTTTTCTG
AATGAGATCAAATGTCTGTTAAAATCAAGTGTAacataccaaaaaaaaaa
attttgaccagaACTCATTTTGGTGAAGTGAGCGAATTTTATCTGAATTC
GGCAAATTTGCTAAGAATAATTCCCGCCAAAACTTTGTTGTTTCTGCtgc
attttataatttttgatgtttctttaATAGACAAAGGTTCTCTGGTGATC
aaacgaagaaaaagaaaaagtcttatttcacaACATGTTCAATTGAAGAT
CAGTTAAAGAAGacattgaaaagtaatattaagttttgcattttttcgaa
aaatttttaaattctcaaGCGCTTAAGAGCGAGGGTGCCCTAAAACaagc
ttttttctttgaaatatcaTGCTCTTTCTAAAGGTATAACTACAAGAGTT
CATATAACCTGTCAAATTTAGAATCCAAAGACGCTCCGGGGAAACTTGTg
tacttttttaaatattcaaaaccTCTTTCTTAAGGAGAGGGTATATGGGA
ACAGCTATGCAAGACTTTTCGGAAAAGATCAGCTACGGAAGACTCAACAA
GGATAAGCGACATTATCGATGGCAAAAAGTATAGGGAGTTATGTAAAGAA
GGAGGCTTTCTTTATAACAATACCAACATAACACTAACCTTCAACACTGA
CGGGGCACTAATGTTCAAAAGCTCAAGAGTAGATATCTGGCCTATGTATG
CCGTCATAAATGAAATAGATCCAAAAGAAAGGTTTAAAACAGAGAACATC
ATAGTTTGGGGAGTTTGGCAAGGACGAGGAAAGCCACCTACGATGACGTT
TCTCGAACCCTTTGTAAATGAGATGAAACATCTTTACAGCAATggtaaca
tttttgaaaattttttttgataaaaaacaaatgcTTTGACTCgtttaata
aaaaacaatcgggtttatttacttatttacatCAAACCCCCATTCTCAta
gacctggtaggattt Run BLAST on NCBI transcript from alignment at sc0002441:21319..22783 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040496 ID=TCONS_00040496|Name=TCONS_00040496|organism=Clytia hemisphaerica|type=transcript|length=1465bp|location=Sequence derived from alignment at sc0002441:21319..22783 (Clytia hemisphaerica)
aaatcctaccaggtctaTGAGAATGGGGGTTTGatgtaaataagtaaata
aacccgattgttttttattaaacGAGTCAAAgcatttgttttttatcaaa
aaaaattttcaaaaatgttaccATTGCTGTAAAGATGTTTCATCTCATTT
ACAAAGGGTTCGAGAAACGTCATCGTAGGTGGCTTTCCTCGTCCTTGCCA
AACTCCCCAAACTATGATGTTCTCTGTTTTAAACCTTTCTTTTGGATCTA
TTTCATTTATGACGGCATACATAGGCCAGATATCTACTCTTGAGCTTTTG
AACATTAGTGCCCCGTCAGTGTTGAAGGTTAGTGTTATGTTGGTATTGTT
ATAAAGAAAGCCTCCTTCTTTACATAACTCCCTATACTTTTTGCCATCGA
TAATGTCGCTTATCCTTGTTGAGTCTTCCGTAGCTGATCTTTTCCGAAAA
GTCTTGCATAGCTGTTCCCATATACCCTCTCCTTAAGAAAGAggttttga
atatttaaaaaagtacACAAGTTTCCCCGGAGCGTCTTTGGATTCTAAAT
TTGACAGGTTATATGAACTCTTGTAGTTATACCTTTAGAAAGAGCAtgat
atttcaaagaaaaaagcttGTTTTAGGGCACCCTCGCTCTTAAGCGCttg
agaatttaaaaatttttcgaaaaaatgcaaaacttaatattacttttcaa
tgtCTTCTTTAACTGATCTTCAATTGAACATGTtgtgaaataagactttt
tctttttcttcgtttGATCACCAGAGAACCTTTGTCTATtaaagaaacat
caaaaattataaaatgcaGCAGAAACAACAAAGTTTTGGCGGGAATTATT
CTTAGCAAATTTGCCGAATTCAGATAAAATTCGCTCACTTCACCAAAATG
AGTtctggtcaaaatttttttttttggtatgtTACACTTGATTTTAACAG
ACATTTGATCTCATTCAGAAAAGTAAAGTCGCTTATAATGGTATTACGca
aattgttttgcttttcgaaattttaatttcaatgactacttttcaaacaa
acagcaatgctttaaagatttacCCTTCACAGTTTGTAGTGCTGCAGGAC
GTAATATTTTGATCGATTGGCCAAATAGCATGACATTTTTCACAATACTC
TATGAACTTATAACTTTCTTCGTCAATAGACTTCGTGCGCTTGTTTTCCA
TTTGCTAAAGAACAGTGAAACAAGTAATTGTACTTCTCATGTAAAGGTCA
ATGACAGTAAAACTGACTTACTATCGACCCCATCAAGTGAGATAAGAAAA
TAAGAGTGCGAATATGATAGAGGGGTTGTTTGTTTACTGATTCCGAATCG
GAATAAATCGGTTCACTTTCAGTTTCAATTTCTCACTCGACTTCCACTAC
CAAGACAGTAGTAGTCAAATTTTCAAGTTCACCCAGGTTCACCATGTTTC
ACCAATCACAATAtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040496-exon-sc0002441-1491911889:21319..22783 | TCONS_00040496-exon-sc0002441-1491911889:21319..22783 | Clytia hemisphaerica | exon |
| TCONS_00040496-exon-sc0002441-1510915933:21319..22783 | TCONS_00040496-exon-sc0002441-1510915933:21319..22783 | Clytia hemisphaerica | exon |
| TCONS_00040496-exon-sc0002441-1575043694:21319..22783 | TCONS_00040496-exon-sc0002441-1575043694:21319..22783 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002441 | supercontig | sc0002441:21319..22783 . |
Blast
The following BLAST results are available for this feature:
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