TCONS_00040495 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040495
Unique NameTCONS_00040495
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040495 ID=TCONS_00040495|Name=TCONS_00040495|organism=Clytia hemisphaerica|type=transcript|length=168bp
ATTCGAAGGCCTTCAGTAGCCAGTTGATATTTCTGAAAGTTGAGTAAAca
tcaaaaattataatttgtAATTATGGACCGAAGAAAGAGTTTTGCATGCT
AATATTTTGGGAAGTTGCTTTTTATATGATTATGAAGTAAGTGTCTTCTT
ATTATTTTTAAGCGAGGA
Run BLAST on NCBI

transcript from alignment at sc0002441:9662..9829

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040495 ID=TCONS_00040495|Name=TCONS_00040495|organism=Clytia hemisphaerica|type=transcript|length=168bp|location=Sequence derived from alignment at sc0002441:9662..9829 (Clytia hemisphaerica)
TCCTCGCTTAAAAATAATAAGAAGACACTTACTTCATAATCATATAAAAA
GCAACTTCCCAAAATATTAGCATGCAAAACTCTTTCTTCGGTCCATAATT
acaaattataatttttgatgTTTACTCAACTTTCAGAAATATCAACTGGC
TACTGAAGGCCTTCGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024626XLOC_024626Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040495-exon-sc0002441-1491911889:9662..9829TCONS_00040495-exon-sc0002441-1491911889:9662..9829Clytia hemisphaericaexon
TCONS_00040495-exon-sc0002441-1510915933:9662..9829TCONS_00040495-exon-sc0002441-1510915933:9662..9829Clytia hemisphaericaexon
TCONS_00040495-exon-sc0002441-1575043694:9662..9829TCONS_00040495-exon-sc0002441-1575043694:9662..9829Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002441supercontigsc0002441:9662..9829 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040495 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top