TCONS_00040490 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040490
Unique NameTCONS_00040490
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2266

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040490 ID=TCONS_00040490|Name=TCONS_00040490|organism=Clytia hemisphaerica|type=transcript|length=2266bp
CgacattgaaaacaaaaaaagATACAAATAAAAATCAGGCCACTTGCAGT
AAATTCGATAGAAATAAAGACCTTGACTCATTATTGGACATTTCAGCTAT
CACGTATGATGACCCTGATGACTTTTCATTCCAACCATCTGAAGCAACGC
TAGAAAACGATTCGCTTGAATTCGATGACGGCGGGGAGGACAAGAAATCA
GAAACATTTGAAACTATTATCGCGTACCGAGAACAGTTAGACCTGCTTCT
TCATCATTGCATGAAATGTGGTTCCACACTCATCGAGAAGAATGTTTTGC
AGCACCAGGGGTCGCAATACACAGTTGAGATGATTTGTTCAAAAGGATGC
AAGAGCCGTTGGTCCAGTCAACCCCCGCTGAAACCGCTGAAAGGAACAGG
AAACCTTGACTTGACAGCCGCAATTACTTTTGCAGGGAtacctttccaaa
aatttgaaagttttgcaTCAATCATGAAGTTGAAGTTTTTCCAGGACTCG
ACATTCTATAGACTCAGGAAAGAATATGTTTCAGAAGTTATCAGGAGAAC
TTGGGAGAATGAACGTAGAAAGACAATTGACGAGCTTAAACAACGTGAAA
ATATCTCCTTACTTGGCGATGGACGGTGCGATAGCCCTGGTCATTCAGCA
AAGTATTTAATATACTCGTTCATGGAGCCAGTGTCGGGGAAAGTGGTTGA
CACAACCGTCATAACTGTCACTGATGTGAAGAATTCTAACGCGATGGAAA
AACAAGGTTTTATCGAGCTTCTACTGGAGCTAAAAATGGTCGAAGGACTC
AAAATCAAATCCGTATCTACGGACATGCATACCCAAATTCGAAAGTTGAT
GAGAACCGACAAGCGGTTTAACGATATGGAACATTTTTTTGACCCGTGGC
ACGTGATTAAGAACTTGATCAAAAAGATAAAAGCCAAAagcaaagaagaa
gaaattcatGAAACTAGGTGAATGGATTCAATCTATCCAAAACCATTTCT
GGTGTTGTCTTGACACAGCTGTTTCTAGCGATGACTTAGTTGAAAGATTC
ATGTCAATTCTGCACCATATTGTCAATCGACATACGTGGATTGGGGCAAA
AACGTTTCTGAAGTGCGCTCATGAACCTCTAACCAAGACAGACGAGAGAG
AGATTCGATGGCTCAAGTCTGATTCTCCAGCCTACAAGGAGTTGcgtgac
attttgaaaaagccTGCATTCGAAAAAAACCTGAGACAACTTGGCACAAA
AGACACAGCGATTCAAACGACATCACTAGAGGTACACCACAACGTCATCA
GTAAATATTTGCCTAAACTCAGGCATTACGAATTTCATTTTGTGCAGCTG
GGAAACATGCTTTCTGCACTCGACCACAATTATAATGCTAACAGAGGTCA
GAAGATAAccatgaagaaaaagaagaaaggcaAAGGATTTGTGGTCAAGA
GTCACTTCAAAATTGCCTACCGGAAGCCAAACAAAAAATTGATAGCTCGA
AAAGTGTACCAGCCAAAGCAATATGGTTACTTGCGAGAAATGTTGGAAGA
GTGTCGAAATAAAGTTTTAACTGGGAATATCAACAAATCAACGCCTGTGA
AAAAAAGAATGGCTCCGACTCAGAGAGACGACAAAAATAAACTCATTCGA
TTGAGGATTGAACGTAGTAGGTTTAGTAAGTGAACCAAACATGAGGTTAA
CTATAAGACAATATAAACTATTATGtacattttgtaaaaagttgTGTAAA
GCAAAGTAacgtttcttttgaaaatttcatattttgttacTAAGGATTTT
GAAATCTGGACATATTATCCTATTTGAAGATCTTCTTTGTTGTAGATTTC
AATGCTACTGCTATTGGAGTTTTAAGTGAAATATATGAGTCTATCTAGAA
TATTTATCTAGAATTTATAATAGGGCAAACGCATAGAATAGTTCGTCAAC
TTCTGGATCATGGCCTTTAAACCCAGTGTAATTATCAACATCGTCTTCTT
CAAATTCGGCCTTTATTCTGCACGCAGCACACGATGGCAGCACTCGTCTG
ACGTTCTTTTGTAGGTTCCGGTGGACCCACCAACAAAACTGGCGATAGGC
TGCATATCTCCAGGTtctataataaaatcaaaaacaattgAAAGCTTTTT
AAATATATTGTTGAGGAACAGCTCCTTCTAACCTAGTAAATTTTggtatt
atatattttttgtgaGGAGAAATGGTTTTATTATTAGCACACTAGATATT
ATtactaattttattt
Run BLAST on NCBI

protein sequence of TCONS_00040490-protein

>TCONS_00040490-protein ID=TCONS_00040490-protein|Name=TCONS_00040490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
TLKTKKDTNKNQATCSKFDRNKDLDSLLDISAITYDDPDDFSFQPSEATL
ENDSLEFDDGGEDKKSETFETIIAYREQLDLLLHHCMKCGSTLIEKNVLQ
HQGSQYTVEMICSKGCKSRWSSQPPLKPLKGTGNLDLTAAITFAGIPFQK
FESFASIMKLKFFQDSTFYRLRKEYVSEVIRRTWENERRKTIDELKQREN
ISLLGDGRCDSPGHSAKYLIYSFMEPVSGKVVDTTVITVTDVKNSNAMEK
QGFIELLLELKMVEGLKIKSVSTDMHTQIRKLMRTDKRFNDMEHFFDPWH
VIKNLIKKIKAKSKEEEIHETR
Run BLAST on NCBI

transcript from alignment at sc0002441:11288..14950-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040490 ID=TCONS_00040490|Name=TCONS_00040490|organism=Clytia hemisphaerica|type=transcript|length=3663bp|location=Sequence derived from alignment at sc0002441:11288..14950- (Clytia hemisphaerica)
CGACATTGAAAACAAAAAAAGGTAATTTTATTGAAGTAAGTACCAAAATA
TACTGGTGAAAAAATGATTTCTAGATTCTTTTGCACTCGATGAAGGGCTG
ACATCTTTTTAACATCGTGTATTTGTCTAAATTCTTCTTTTTCACCTGCT
TCTAGATACAAATAAAAATCAGGCCACTTGCAGTAAATTCGATAGAAATA
AAGACCTTGACTCATTATTGGACATTTCAGGTATGGCATCATATATAATT
AACAAAATTATTCTTCACTGTTTCCGTTTTTATCAGTTTGAGTTATATTT
ATAATATTGAAATTGTATGAATCACAATTGCTGCAGTTTAGCTTAAATAA
TTTCCAATTTACGATTAGCTAGCGCAGTCAAAATCTACGATTCTATTTTC
AGCTATCACGTATGATGACCCTGATGACTTTTCATTCCAACCATCTGAAG
CAACGCTAGAAAACGATTCGCTTGAATTCGATGACGGCGGGGAGGACAAG
AAATCAGAAACATTTGAAACTATTATCGCGTACCGAGAACAGTTAGACCT
GCTTCTTCATCATTGCATGAAATGTGGTTCCACACTCATCGAGAAGAATG
TTTTGCAGCACCAGGGGTCGCAATACACAGTTGAGATGATTTGTTCAAAA
GGATGCAAGAGCCGGTAATTATTAATCGAATTTCTCATTAGGTATATTGC
TTGACAAAGTATCAGTTAGTATCAGTTGTCGTAGATCCAATCCACATATT
TCACTTCATTTTCTAGCCTTAGTAAACCCTGGTGGCATCAAATGAACATG
ATGTTTTTTTAATTATCATGTTATGACTCTTCTAATTTCAGTTGGTCCAG
TCAACCCCCGCTGAAACCGCTGAAAGGAACAGGAAACCTTGACTTGACAG
CCGCAATTACTTTTGCAGGTATTGTATTTATTATAACTTATATTTGTTTA
AAAAAGAATGTTTTGAGGTCTTAAGACAGCTAAGCAAGTTTCTGCTAATT
GTTTACTTCTATGTTTAACTTTTCCTGTTCTTCTTTCAGGGATACCTTTC
CAAAAATTTGAAAGTTTTGCATCAATCATGAAGTTGAAGTTTTTCCAGGA
CTCGACATTCTATAGACTCAGGAAAGAATATGTTTCAGAAGTTATCAGGA
GAACTTGGGAGAATGAACGTAGAAAGGTAATTTTGATTAACAAAAATTTC
TTTTACGCGTGTAAAGTAACAAAAAAAAATGTTTGTTTATAAATAAAATG
CTAGCTTCGTTTGAAGCCTTTCCTTTTTTTTTAAATATACAGAAATAACA
TAAGTCTCCTTCAAAAGTACTGACTTTATACTTTTGTTTAGACAATTGAC
GAGCTTAAACAACGTGAAAATATCTCCTTACTTGGCGATGGACGGTGCGA
TAGCCCTGGTCATTCAGCAAAGTATTTAATATACTCGTTCATGGAGCCAG
TGTCGGGGAAAGTGGTTGACACAACCGTCATAACTGTCACTGATGTAAGA
TATAGGAATGATATGTTCACATTTCTTTTACCCAGATCATTACTGTCTTA
TACTTGACTTTTATTTGATTTGATTTTAATCTACAATTAAATATAAATCA
TGACAAAATATCTCATTCGAATCAATTCCTCTACCATAATAATACACTCG
ACATTTTCGATAAATTTTAATTTAATAATTAGATTTTGTCATCTTTCAGG
TGAAGAATTCTAACGCGATGGAAAAACAAGGTTTTATCGAGCTTCTACTG
GAGCTAAAAATGGTCGAAGGACTCAAAATCAAATCCGTATCTACGGACAT
GCATACCCAAATTCGAAAGTTGATGAGAACCGACAAGCGGTTTAACGATA
TGGAACATTTTTTTGACCCGTGGCACGTGATTAAGAACTTGATCAAAAAG
ATAAAAGCCAAAAGCAAAGAAGAAGAAATTCATGAAACTAGGTAGGAAAA
CTCTTTTGAAAAAAAGAACGTACAGAGTTCTGACACATTGATATAACTTG
ATATCCAAGGCTATCAACAATAGTTGGATTATATCCGTATAAAACCCCCG
GTTAACAAATCGAACTTGCGTATATAAATTGGTTTTTTTCTCACTTTTTG
ATCATAATACACTTCCACGTCAGGATTTTTTATACGGACTATGGTTTATT
GTAATTGAAATTGATTAATTCATTCATATTTCAAATACTTCAGGTGAATG
GATTCAATCTATCCAAAACCATTTCTGGTGTTGTCTTGACACAGCTGTTT
CTAGCGATGACTTAGTTGAAAGATTCATGTCAATTCTGCACCATATTGTC
AATCGACATACGTGGATTGGGGCAAAAACGTTTCTGAAGTGCGCTCATGA
ACCTCTAACCAAGACAGACGAGAGAGAGATTCGATGGCTCAAGTCTGATT
CTCCAGCCTACAAGGAGTTGCGTGACATTTTGAAAAAGCCTGCATTCGAA
AAAAACCTGAGACAACTTGGCACAAAAGACACAGCGATTCAAACGACATC
ACTAGAGGTTCGATTAGTTTTTTAAAATTTACATTACATATTACATCACA
CAATACCTTGACGACATTCTACACTCATCGGAAATTTTAGAGTTCGTGGT
CTTTATTATCCTAAATAAATTGGTGATTTTTTTCACAAGTAGGTGTTTTC
TAGGAATTTATTTTTTTACTTAATTCAGGTACACCACAACGTCATCAGTA
AATATTTGCCTAAACTCAGGCATTACGAATTTCATTTTGTGCAGCTGGGA
AACATGCTTTCTGCACTCGACCACAATTATAATGCTAACAGAGGTCAGAA
GATAACCATGAAGAAAAAGAAGAAAGGCAAAGGATTTGTGGTCAAGAGTC
ACTTCAAAATTGCCTACCGGAAGCCAAACAAAAAATTGATAGCTCGAAAA
GTGTACCAGCCAAAGCAATATGGTTACTTGCGAGAAATGTTGGAAGAGTG
TCGAAATAAAGTTTTAACTGGGAATATCAACAAATCAACGCCTGTGAAAA
AAAGAATGGCTCCGACTCAGAGAGACGACAAAAATAAACTCATTCGATTG
AGGATTGAACGTAGTAGGTTTAGTAAGTGAACCAAACATGAGGTTAACTA
TAAGACAATATAAACTATTATGTACATTTTGTAAAAAGTTGTGTAAAGCA
AAGTAACGTTTCTTTTGAAAATTTCATATTTTGTTACTAAGGATTTTGAA
ATCTGGACATATTATCCTATTTGAAGATCTTCTTTGTTGTAGATTTCAAT
GCTACTGCTATTGGAGTTTTAAGTGAAATATATGAGTCTATCTAGAATAT
TTATCTAGAATTTATAATAGGGCAAACGCATAGAATAGTTCGTCAACTTC
TGGATCATGGCCTTTAAACCCAGTGTAATTATCAACATCGTCTTCTTCAA
ATTCGGCCTTTATTCTGCACGCAGCACACGATGGCAGCACTCGTCTGACG
TTCTTTTGTAGGTTCCGGTGGACCCACCAACAAAACTGGCGATAGGCTGC
ATATCTCCAGGTTCTATAATAAAATCAAAAACAATTGAAAGCTTTTTAAA
TATATTGTTGAGGAACAGCTCCTTCTAACCTAGTAAATTTTGGTATTATA
TATTTTTTGTGAGGAGAAATGGTTTTATTATTAGCACACTAGATATTATT
ACTAATTTTATTT

Coding sequence (CDS) from alignment at sc0002441:11288..14950-

>TCONS_00040490 ID=TCONS_00040490|Name=TCONS_00040490|organism=Clytia hemisphaerica|type=CDS|length=7752bp|location=Sequence derived from alignment at sc0002441:11288..14950- (Clytia hemisphaerica)
GTGAGTGAAGAATTCTAACGCGATGGAAAAACAAGGTTTTATCGAGCTTC
TACTGGAGCTAAAAATGGTCGAAGGACTCAAAATCAAATCCGTATCTACG
GACATGCATACCCAAATTCGAAAGTTGATGAGAACCGACAAGCGGTTTAA
CGATATGGAACATTTTTTTGACCCGTGGCACGTGATTAAGAACTTGATCA
AAAAGATAAAAGCCAAAAGCAAAGAAGAAGAAATTCATGAAACTAGACAA
TTGACGAGCTTAAACAACGTGAAAATATCTCCTTACTTGGCGATGGACGG
TGCGATAGCCCTGGTCATTCAGCAAAGTATTTAATATACTCGTTCATGGA
GCCAGTGTCGGGGAAAGTGGTTGACACAACCGTCATAACTGTCACTGATG
GATACCTTTCCAAAAATTTGAAAGTTTTGCATCAATCATGAAGTTGAAGT
TTTTCCAGGACTCGACATTCTATAGACTCAGGAAAGAATATGTTTCAGAA
GTTATCAGGAGAACTTGGGAGAATGAACGTAGAAAGTTGGTCCAGTCAAC
CCCCGCTGAAACCGCTGAAAGGAACAGGAAACCTTGACTTGACAGCCGCA
ATTACTTTTGCAGCTATCACGTATGATGACCCTGATGACTTTTCATTCCA
ACCATCTGAAGCAACGCTAGAAAACGATTCGCTTGAATTCGATGACGGCG
GGGAGGACAAGAAATCAGAAACATTTGAAACTATTATCGCGTACCGAGAA
CAGTTAGACCTGCTTCTTCATCATTGCATGAAATGTGGTTCCACACTCAT
CGAGAAGAATGTTTTGCAGCACCAGGGGTCGCAATACACAGTTGAGATGA
TTTGTTCAAAAGGATGCAAGAGCCGATACAAATAAAAATCAGGCCACTTG
CAGTAAATTCGATAGAAATAAAGACCTTGACTCATTATTGGACATTTCAG
ACATTGAAAACAAAAAAAGGTGAGTGAAGAATTCTAACGCGATGGAAAAA
CAAGGTTTTATCGAGCTTCTACTGGAGCTAAAAATGGTCGAAGGACTCAA
AATCAAATCCGTATCTACGGACATGCATACCCAAATTCGAAAGTTGATGA
GAACCGACAAGCGGTTTAACGATATGGAACATTTTTTTGACCCGTGGCAC
GTGATTAAGAACTTGATCAAAAAGATAAAAGCCAAAAGCAAAGAAGAAGA
AATTCATGAAACTAGACAATTGACGAGCTTAAACAACGTGAAAATATCTC
CTTACTTGGCGATGGACGGTGCGATAGCCCTGGTCATTCAGCAAAGTATT
TAATATACTCGTTCATGGAGCCAGTGTCGGGGAAAGTGGTTGACACAACC
GTCATAACTGTCACTGATGGATACCTTTCCAAAAATTTGAAAGTTTTGCA
TCAATCATGAAGTTGAAGTTTTTCCAGGACTCGACATTCTATAGACTCAG
GAAAGAATATGTTTCAGAAGTTATCAGGAGAACTTGGGAGAATGAACGTA
GAAAGTTGGTCCAGTCAACCCCCGCTGAAACCGCTGAAAGGAACAGGAAA
CCTTGACTTGACAGCCGCAATTACTTTTGCAGCTATCACGTATGATGACC
CTGATGACTTTTCATTCCAACCATCTGAAGCAACGCTAGAAAACGATTCG
CTTGAATTCGATGACGGCGGGGAGGACAAGAAATCAGAAACATTTGAAAC
TATTATCGCGTACCGAGAACAGTTAGACCTGCTTCTTCATCATTGCATGA
AATGTGGTTCCACACTCATCGAGAAGAATGTTTTGCAGCACCAGGGGTCG
CAATACACAGTTGAGATGATTTGTTCAAAAGGATGCAAGAGCCGATACAA
ATAAAAATCAGGCCACTTGCAGTAAATTCGATAGAAATAAAGACCTTGAC
TCATTATTGGACATTTCAGACATTGAAAACAAAAAAAGGTGAGTGAAGAA
TTCTAACGCGATGGAAAAACAAGGTTTTATCGAGCTTCTACTGGAGCTAA
AAATGGTCGAAGGACTCAAAATCAAATCCGTATCTACGGACATGCATACC
CAAATTCGAAAGTTGATGAGAACCGACAAGCGGTTTAACGATATGGAACA
TTTTTTTGACCCGTGGCACGTGATTAAGAACTTGATCAAAAAGATAAAAG
CCAAAAGCAAAGAAGAAGAAATTCATGAAACTAGACAATTGACGAGCTTA
AACAACGTGAAAATATCTCCTTACTTGGCGATGGACGGTGCGATAGCCCT
GGTCATTCAGCAAAGTATTTAATATACTCGTTCATGGAGCCAGTGTCGGG
GAAAGTGGTTGACACAACCGTCATAACTGTCACTGATGGATACCTTTCCA
AAAATTTGAAAGTTTTGCATCAATCATGAAGTTGAAGTTTTTCCAGGACT
CGACATTCTATAGACTCAGGAAAGAATATGTTTCAGAAGTTATCAGGAGA
ACTTGGGAGAATGAACGTAGAAAGTTGGTCCAGTCAACCCCCGCTGAAAC
CGCTGAAAGGAACAGGAAACCTTGACTTGACAGCCGCAATTACTTTTGCA
GCTATCACGTATGATGACCCTGATGACTTTTCATTCCAACCATCTGAAGC
AACGCTAGAAAACGATTCGCTTGAATTCGATGACGGCGGGGAGGACAAGA
AATCAGAAACATTTGAAACTATTATCGCGTACCGAGAACAGTTAGACCTG
CTTCTTCATCATTGCATGAAATGTGGTTCCACACTCATCGAGAAGAATGT
TTTGCAGCACCAGGGGTCGCAATACACAGTTGAGATGATTTGTTCAAAAG
GATGCAAGAGCCGATACAAATAAAAATCAGGCCACTTGCAGTAAATTCGA
TAGAAATAAAGACCTTGACTCATTATTGGACATTTCAGACATTGAAAACA
AAAAAAGGTGAGTGAAGAATTCTAACGCGATGGAAAAACAAGGTTTTATC
GAGCTTCTACTGGAGCTAAAAATGGTCGAAGGACTCAAAATCAAATCCGT
ATCTACGGACATGCATACCCAAATTCGAAAGTTGATGAGAACCGACAAGC
GGTTTAACGATATGGAACATTTTTTTGACCCGTGGCACGTGATTAAGAAC
TTGATCAAAAAGATAAAAGCCAAAAGCAAAGAAGAAGAAATTCATGAAAC
TAGACAATTGACGAGCTTAAACAACGTGAAAATATCTCCTTACTTGGCGA
TGGACGGTGCGATAGCCCTGGTCATTCAGCAAAGTATTTAATATACTCGT
TCATGGAGCCAGTGTCGGGGAAAGTGGTTGACACAACCGTCATAACTGTC
ACTGATGGATACCTTTCCAAAAATTTGAAAGTTTTGCATCAATCATGAAG
TTGAAGTTTTTCCAGGACTCGACATTCTATAGACTCAGGAAAGAATATGT
TTCAGAAGTTATCAGGAGAACTTGGGAGAATGAACGTAGAAAGTTGGTCC
AGTCAACCCCCGCTGAAACCGCTGAAAGGAACAGGAAACCTTGACTTGAC
AGCCGCAATTACTTTTGCAGCTATCACGTATGATGACCCTGATGACTTTT
CATTCCAACCATCTGAAGCAACGCTAGAAAACGATTCGCTTGAATTCGAT
GACGGCGGGGAGGACAAGAAATCAGAAACATTTGAAACTATTATCGCGTA
CCGAGAACAGTTAGACCTGCTTCTTCATCATTGCATGAAATGTGGTTCCA
CACTCATCGAGAAGAATGTTTTGCAGCACCAGGGGTCGCAATACACAGTT
GAGATGATTTGTTCAAAAGGATGCAAGAGCCGATACAAATAAAAATCAGG
CCACTTGCAGTAAATTCGATAGAAATAAAGACCTTGACTCATTATTGGAC
ATTTCAGACATTGAAAACAAAAAAAGGTGAGTGAAGAATTCTAACGCGAT
GGAAAAACAAGGTTTTATCGAGCTTCTACTGGAGCTAAAAATGGTCGAAG
GACTCAAAATCAAATCCGTATCTACGGACATGCATACCCAAATTCGAAAG
TTGATGAGAACCGACAAGCGGTTTAACGATATGGAACATTTTTTTGACCC
GTGGCACGTGATTAAGAACTTGATCAAAAAGATAAAAGCCAAAAGCAAAG
AAGAAGAAATTCATGAAACTAGACAATTGACGAGCTTAAACAACGTGAAA
ATATCTCCTTACTTGGCGATGGACGGTGCGATAGCCCTGGTCATTCAGCA
AAGTATTTAATATACTCGTTCATGGAGCCAGTGTCGGGGAAAGTGGTTGA
CACAACCGTCATAACTGTCACTGATGGATACCTTTCCAAAAATTTGAAAG
TTTTGCATCAATCATGAAGTTGAAGTTTTTCCAGGACTCGACATTCTATA
GACTCAGGAAAGAATATGTTTCAGAAGTTATCAGGAGAACTTGGGAGAAT
GAACGTAGAAAGTTGGTCCAGTCAACCCCCGCTGAAACCGCTGAAAGGAA
CAGGAAACCTTGACTTGACAGCCGCAATTACTTTTGCAGCTATCACGTAT
GATGACCCTGATGACTTTTCATTCCAACCATCTGAAGCAACGCTAGAAAA
CGATTCGCTTGAATTCGATGACGGCGGGGAGGACAAGAAATCAGAAACAT
TTGAAACTATTATCGCGTACCGAGAACAGTTAGACCTGCTTCTTCATCAT
TGCATGAAATGTGGTTCCACACTCATCGAGAAGAATGTTTTGCAGCACCA
GGGGTCGCAATACACAGTTGAGATGATTTGTTCAAAAGGATGCAAGAGCC
GATACAAATAAAAATCAGGCCACTTGCAGTAAATTCGATAGAAATAAAGA
CCTTGACTCATTATTGGACATTTCAGACATTGAAAACAAAAAAAGGTGAG
TGAAGAATTCTAACGCGATGGAAAAACAAGGTTTTATCGAGCTTCTACTG
GAGCTAAAAATGGTCGAAGGACTCAAAATCAAATCCGTATCTACGGACAT
GCATACCCAAATTCGAAAGTTGATGAGAACCGACAAGCGGTTTAACGATA
TGGAACATTTTTTTGACCCGTGGCACGTGATTAAGAACTTGATCAAAAAG
ATAAAAGCCAAAAGCAAAGAAGAAGAAATTCATGAAACTAGACAATTGAC
GAGCTTAAACAACGTGAAAATATCTCCTTACTTGGCGATGGACGGTGCGA
TAGCCCTGGTCATTCAGCAAAGTATTTAATATACTCGTTCATGGAGCCAG
TGTCGGGGAAAGTGGTTGACACAACCGTCATAACTGTCACTGATGGATAC
CTTTCCAAAAATTTGAAAGTTTTGCATCAATCATGAAGTTGAAGTTTTTC
CAGGACTCGACATTCTATAGACTCAGGAAAGAATATGTTTCAGAAGTTAT
CAGGAGAACTTGGGAGAATGAACGTAGAAAGTTGGTCCAGTCAACCCCCG
CTGAAACCGCTGAAAGGAACAGGAAACCTTGACTTGACAGCCGCAATTAC
TTTTGCAGCTATCACGTATGATGACCCTGATGACTTTTCATTCCAACCAT
CTGAAGCAACGCTAGAAAACGATTCGCTTGAATTCGATGACGGCGGGGAG
GACAAGAAATCAGAAACATTTGAAACTATTATCGCGTACCGAGAACAGTT
AGACCTGCTTCTTCATCATTGCATGAAATGTGGTTCCACACTCATCGAGA
AGAATGTTTTGCAGCACCAGGGGTCGCAATACACAGTTGAGATGATTTGT
TCAAAAGGATGCAAGAGCCGATACAAATAAAAATCAGGCCACTTGCAGTA
AATTCGATAGAAATAAAGACCTTGACTCATTATTGGACATTTCAGACATT
GAAAACAAAAAAAGGTGAGTGAAGAATTCTAACGCGATGGAAAAACAAGG
TTTTATCGAGCTTCTACTGGAGCTAAAAATGGTCGAAGGACTCAAAATCA
AATCCGTATCTACGGACATGCATACCCAAATTCGAAAGTTGATGAGAACC
GACAAGCGGTTTAACGATATGGAACATTTTTTTGACCCGTGGCACGTGAT
TAAGAACTTGATCAAAAAGATAAAAGCCAAAAGCAAAGAAGAAGAAATTC
ATGAAACTAGACAATTGACGAGCTTAAACAACGTGAAAATATCTCCTTAC
TTGGCGATGGACGGTGCGATAGCCCTGGTCATTCAGCAAAGTATTTAATA
TACTCGTTCATGGAGCCAGTGTCGGGGAAAGTGGTTGACACAACCGTCAT
AACTGTCACTGATGGATACCTTTCCAAAAATTTGAAAGTTTTGCATCAAT
CATGAAGTTGAAGTTTTTCCAGGACTCGACATTCTATAGACTCAGGAAAG
AATATGTTTCAGAAGTTATCAGGAGAACTTGGGAGAATGAACGTAGAAAG
TTGGTCCAGTCAACCCCCGCTGAAACCGCTGAAAGGAACAGGAAACCTTG
ACTTGACAGCCGCAATTACTTTTGCAGCTATCACGTATGATGACCCTGAT
GACTTTTCATTCCAACCATCTGAAGCAACGCTAGAAAACGATTCGCTTGA
ATTCGATGACGGCGGGGAGGACAAGAAATCAGAAACATTTGAAACTATTA
TCGCGTACCGAGAACAGTTAGACCTGCTTCTTCATCATTGCATGAAATGT
GGTTCCACACTCATCGAGAAGAATGTTTTGCAGCACCAGGGGTCGCAATA
CACAGTTGAGATGATTTGTTCAAAAGGATGCAAGAGCCGATACAAATAAA
AATCAGGCCACTTGCAGTAAATTCGATAGAAATAAAGACCTTGACTCATT
ATTGGACATTTCAGACATTGAAAACAAAAAAAGGTGAGTGAAGAATTCTA
ACGCGATGGAAAAACAAGGTTTTATCGAGCTTCTACTGGAGCTAAAAATG
GTCGAAGGACTCAAAATCAAATCCGTATCTACGGACATGCATACCCAAAT
TCGAAAGTTGATGAGAACCGACAAGCGGTTTAACGATATGGAACATTTTT
TTGACCCGTGGCACGTGATTAAGAACTTGATCAAAAAGATAAAAGCCAAA
AGCAAAGAAGAAGAAATTCATGAAACTAGACAATTGACGAGCTTAAACAA
CGTGAAAATATCTCCTTACTTGGCGATGGACGGTGCGATAGCCCTGGTCA
TTCAGCAAAGTATTTAATATACTCGTTCATGGAGCCAGTGTCGGGGAAAG
TGGTTGACACAACCGTCATAACTGTCACTGATGGATACCTTTCCAAAAAT
TTGAAAGTTTTGCATCAATCATGAAGTTGAAGTTTTTCCAGGACTCGACA
TTCTATAGACTCAGGAAAGAATATGTTTCAGAAGTTATCAGGAGAACTTG
GGAGAATGAACGTAGAAAGTTGGTCCAGTCAACCCCCGCTGAAACCGCTG
AAAGGAACAGGAAACCTTGACTTGACAGCCGCAATTACTTTTGCAGCTAT
CACGTATGATGACCCTGATGACTTTTCATTCCAACCATCTGAAGCAACGC
TAGAAAACGATTCGCTTGAATTCGATGACGGCGGGGAGGACAAGAAATCA
GAAACATTTGAAACTATTATCGCGTACCGAGAACAGTTAGACCTGCTTCT
TCATCATTGCATGAAATGTGGTTCCACACTCATCGAGAAGAATGTTTTGC
AGCACCAGGGGTCGCAATACACAGTTGAGATGATTTGTTCAAAAGGATGC
AAGAGCCGATACAAATAAAAATCAGGCCACTTGCAGTAAATTCGATAGAA
ATAAAGACCTTGACTCATTATTGGACATTTCAGACATTGAAAACAAAAAA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024622XLOC_024622Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040490-exon-sc0002441-1575043694:14930..14950TCONS_00040490-exon-sc0002441-1575043694:14930..14950Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1575043694:14721..14795TCONS_00040490-exon-sc0002441-1575043694:14721..14795Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1575043694:14287..14548TCONS_00040490-exon-sc0002441-1575043694:14287..14548Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1575043694:14033..14109TCONS_00040490-exon-sc0002441-1575043694:14033..14109Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1575043694:13775..13911TCONS_00040490-exon-sc0002441-1575043694:13775..13911Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1575043694:13457..13609TCONS_00040490-exon-sc0002441-1575043694:13457..13609Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1575043694:13010..13251TCONS_00040490-exon-sc0002441-1575043694:13010..13251Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1575043694:12444..12757TCONS_00040490-exon-sc0002441-1575043694:12444..12757Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1575043694:11288..12272TCONS_00040490-exon-sc0002441-1575043694:11288..12272Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:14930..14950TCONS_00040490-exon-sc0002441-1510915933:14930..14950Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:14721..14795TCONS_00040490-exon-sc0002441-1510915933:14721..14795Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:14287..14548TCONS_00040490-exon-sc0002441-1510915933:14287..14548Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:14033..14109TCONS_00040490-exon-sc0002441-1510915933:14033..14109Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:13775..13911TCONS_00040490-exon-sc0002441-1510915933:13775..13911Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:13457..13609TCONS_00040490-exon-sc0002441-1510915933:13457..13609Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:13010..13251TCONS_00040490-exon-sc0002441-1510915933:13010..13251Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:12444..12757TCONS_00040490-exon-sc0002441-1510915933:12444..12757Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1510915933:11288..12272TCONS_00040490-exon-sc0002441-1510915933:11288..12272Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:14930..14950TCONS_00040490-exon-sc0002441-1491911889:14930..14950Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:14721..14795TCONS_00040490-exon-sc0002441-1491911889:14721..14795Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:14287..14548TCONS_00040490-exon-sc0002441-1491911889:14287..14548Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:14033..14109TCONS_00040490-exon-sc0002441-1491911889:14033..14109Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:13775..13911TCONS_00040490-exon-sc0002441-1491911889:13775..13911Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:13457..13609TCONS_00040490-exon-sc0002441-1491911889:13457..13609Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:13010..13251TCONS_00040490-exon-sc0002441-1491911889:13010..13251Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:12444..12757TCONS_00040490-exon-sc0002441-1491911889:12444..12757Clytia hemisphaericaexon
TCONS_00040490-exon-sc0002441-1491911889:11288..12272TCONS_00040490-exon-sc0002441-1491911889:11288..12272Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040490-proteinTCONS_00040490-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002441supercontigsc0002441:11288..14950 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.186758	0.156199	0.12146	0.0810391	0.430048	0.457321	0.279136	0.410538	0.223129	0.260183	0.245622	0.321709	0.344877	0.226335	0.507341	0.611895	0.97367	0.595446	0.276947	0.275466	0.525944	0.667412	0.119318	0.290833	0.0925884	0.0873913	0.4114	0.277633	0.298173	0.184318
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040490 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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