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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040446 ID=TCONS_00040446|Name=TCONS_00040446|organism=Clytia hemisphaerica|type=transcript|length=391bp
GCTTGAGAAAGCAAGAAActttgtattgaaaaaatatctctCTTTATTTT
CTAAGTACGTTATACACACACTTAGCGACATACTTGTTTCAGGAGCATTT
CAGAGTTGTTTGTGCAAAGTGAAAGTTTTGATGCCATCACAACACAAAAC
ACAGAATGGAAAGAAAGATTTAAGAAATTGTTTACAGAGAGAAAAGAAAC
ATTCAAATTCGAAGTGGAAGTATACAATAAGAGAATCACGTTAAATGACA
AAGTCTATTATATTGAGgaaattcaaaaatatattgCCATCCCTGGAGAC
GTCAACTTGAAGAAGGCAGATCTTAATTTCAGCTTGCTGTTAGATTTTGA
GAATAGTGGGCAGTTGACGCAGCTGTTCTTTGGTCGTTTGG Run BLAST on NCBI transcript from alignment at sc0002432:21161..22467- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040446 ID=TCONS_00040446|Name=TCONS_00040446|organism=Clytia hemisphaerica|type=transcript|length=1307bp|location=Sequence derived from alignment at sc0002432:21161..22467- (Clytia hemisphaerica)
GCTTGAGAAAGCAAGAAACTTTGTATTGAAAAAATATCTCTCTTTATTTT
CTAAGTACGTTATACACACACTTAGCGACATACTTGTTTCAGGAGCATTT
CAGAGTTGTTTGTGCAAAGTGAAAGTTTTGATGCCATCACAACACAAAAC
ACAGAATGGAAAGAAAGATTTAAGGTGAGTTGTTTTAATCCTTTACCATT
TCGACTTGGTTTGGCTGAATTTGGAATTACCTAAATGAAACGGAAATGTT
GTGTTCAAGTCATGAAAAATCGGTTTAAAAATCTGTAAATGATATGTACA
TACTTTTGAAAATCAGCTAATTTATTGCAGTTAATTGTACTGTAGCAAAT
TTTTCTCGGACAAAATATAAAATCCGATAAAATGGATTTTTTTCTTCCCT
AGATGGGAATTGCTTTCTAAAATCTGATGGTCAGTTGATGTAAGTAGTAA
GTCTGCGACCGCAGTTAGAGGCGACCTGAAGGCTCCTCTTTCGATAGCTA
TCCACCCGAAGGTAGGGGAGGGCGCCACTTTTTCTCCCTGGGTTGCTCCA
CTTACCCTTGACCCTTCTCTTAATTGCGGAGCATCAAGCAGAGAGTTGCT
CAGTTGATATAGATTTTGTTGACGGTAACAATTTTCGTTTTAGAAATTGT
TTACAGAGAGAAAAGAAACATTCAAATTCGAAGTGGAAGTATACAATAAG
AGAATCACGTTAAATGACAAAGTCTATTATATTGAGGTTAGTATTTTTTT
ATGATCATCAACATGAAAAATATGAGCATTCTGATTGGCTAAAAAACGCG
TACATCAAATGCTGTATTTCATATTGTACCGTACAAATACAAGAGCGCGT
TCAAAAAAGGGGTCTGGTAAGCGAAGGATCGTATCTTGCAGTATCTTGTA
CAATTCAGAAATGTTTTCTTTTCGCTTGCAATACACAACAGCTTATCAAA
AGATTCTTTTTTAATGACCATTCGATTTTTTTTTCGAATGTTTTGATGCT
GATTTCATCTAAATAAAAGAATTTAAAAGGAAGTGACGTCGAGATTCTTT
GTCTTTGAAAACGTTATTGCGACGACTTGAGACATTTTGACTTCATTCCT
TCTTAGTAAACTCTAGCACAGTCTTCTCACGCGCTTTTAAGGTTGATAGA
TGTATTTAAGCTAATACCATTTTGTATCACTAGGAAATTCAAAAATATAT
TGCCATCCCTGGAGACGTCAACTTGAAGAAGGCAGATCTTAATTTCAGCT
TGCTGTTAGATTTTGAGAATAGTGGGCAGTTGACGCAGCTGTTCTTTGGT
CGTTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040446-exon-sc0002432-1575043694:22294..22467 | TCONS_00040446-exon-sc0002432-1575043694:22294..22467 | Clytia hemisphaerica | exon |
| TCONS_00040446-exon-sc0002432-1575043694:21732..21824 | TCONS_00040446-exon-sc0002432-1575043694:21732..21824 | Clytia hemisphaerica | exon |
| TCONS_00040446-exon-sc0002432-1575043694:21161..21284 | TCONS_00040446-exon-sc0002432-1575043694:21161..21284 | Clytia hemisphaerica | exon |
| TCONS_00040446-exon-sc0002432-1510915933:22294..22467 | TCONS_00040446-exon-sc0002432-1510915933:22294..22467 | Clytia hemisphaerica | exon |
| TCONS_00040446-exon-sc0002432-1510915933:21732..21824 | TCONS_00040446-exon-sc0002432-1510915933:21732..21824 | Clytia hemisphaerica | exon |
| TCONS_00040446-exon-sc0002432-1510915933:21161..21284 | TCONS_00040446-exon-sc0002432-1510915933:21161..21284 | Clytia hemisphaerica | exon |
| TCONS_00040446-exon-sc0002432-1491911889:22294..22467 | TCONS_00040446-exon-sc0002432-1491911889:22294..22467 | Clytia hemisphaerica | exon |
| TCONS_00040446-exon-sc0002432-1491911889:21732..21824 | TCONS_00040446-exon-sc0002432-1491911889:21732..21824 | Clytia hemisphaerica | exon |
| TCONS_00040446-exon-sc0002432-1491911889:21161..21284 | TCONS_00040446-exon-sc0002432-1491911889:21161..21284 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002432 | supercontig | sc0002432:21161..22467 - |
Blast
The following BLAST results are available for this feature:
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