TCONS_00040436 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040436
Unique NameTCONS_00040436
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5292

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040436 ID=TCONS_00040436|Name=TCONS_00040436|organism=Clytia hemisphaerica|type=transcript|length=5292bp
ccgttttgagctattttacagtaggtagtaagtagtaggtagtaagtatt
aagtagtaggtagtaggcgttttgtacttgccggtTGATTATGGATTAAT
TATGAGTTATCAATTGGAAAAAGCTAtcataaactattgcaagaactctc
gaaacaaaacatgaCCATagtataatgtcaagatgtcaattaatgtgttc
aaaaaagttgtaaaaaaattACCTCTATAATTCTGAATCcattgctcgtg
tttaaaaaaatgttaacaattttgaaagaccccatcggactTAGGCAAGG
CTGttagatttaggaccactcacggtatggTTTTGTATTGagtggggggg
gggtcttgtatacaaaaaaaaatgcaaCAAGTTGCATCACTACTGCTGGC
CGGCTTTGGAGAGCAGGAAACTTGGTTAGAACAAGGACAGTATGATcaat
tcaaataatttttatttctacaGCATACATTATTTGATGATGACCTATTA
AAGACCTTTACACGCTATCATGCATACAAATACAGAGATGTACCAACAAG
ACAAATACGTGAACATCAGATGTGCCACTCAACTAGTCAACCTATGTATA
TAGATCCCTTCAAAGCACCTTTTCTACCTCCTGAAACACATCTCCTTAGT
TGGAGTAGTATTTTGGGTAATGCAAATACCATTGCTTCAGGACATTGGTT
TATTGAGACAGAAGTAGGAAAACTTTCATGGGATTGTGTTCAAAAATTCC
TTCAGTTGCACAAAATAAAGGAACTAAAGAAAGAGGTGTCAAGTGAAATT
GATTGGTTTAATGACAGTTGCCAAACTCCAAATTCGATTGGGCATCCACC
CTCTCAAGCTGTTATAAACAGCTTTCGATCATTCCTTTTAAATGAACCTG
CAAAACAAGTGTGTAGTAACTACTTGATGTCAGCAATGGAAATGAGTGCT
CTGTGTGTCAAAAGGTTGGTTTATGGCAGCCAGATACTCTGGTTTTCTCA
TCAGCTAAACAAACAGCAAAAGGAAACTTTGTGTGTTTATCTAAATATGA
CAAAGGAGATAAGATGTTCCAATATTTCTGAATATAAAAGACTTTGTTTT
TTCATCAACGTTGGGCGGTATGTCAACAAGGAAACTTTTATTGCTAATGC
GGCTCAAGGGAAACAAGGGTctcattgggtttgtttttttgttgataTGG
AAAGCAAATGTGGTCTTTATGGAGATTCCCTTGGTTGGCCCATGCCTGGT
GACCTGAAAGAACAAATTGAACAAATGTGTAGAAAGAAGATACCTGGATT
TAGCATTAACACTATCAAGTATGCCCACCAACCAGAAAACCATTCTTCAG
CAAAAACTAGATGCGGTGAAAACTGCATCCGTTATCCACTACAAACATGT
GGAAATATATGTGGAATTATATCCATTGTTATTGCAGCAATATACTGCCT
TAGTCATGATTATTTCCGGCAGATTACAGAAAGAACATCAATCAAACCAA
AGCCGAAATTTTCTGATGAAACCAACTTTCTTCAACAATTATTTGAGACG
AGTTGTTATTGCATGGATCACAACAAAGCATATTGATATTCACAATGTAT
GTCCAGATGCAACTACGGATGTCATCTCTCCAGATTCAGATTCTGATTCA
GATTCAGAAATCCCACGGcttaaagaagaaatttttgttaaaCTAGAGCC
TTCTAAAGCAGCTGAAACTGAAAAAGGAGGAGAAAAGATTGCTCCAAAAG
CTAAGACTAAAAAAGAAGTGAAAAATACCATACCTGTTCCTTCGAAATCT
GAGACTgagaaaaaaggagaaaatatcACACCTGCTCCTACAGAAGAAGC
TGAGGCTGAAAAGAGAAACAAAAAAAGGATTTCTTGCCCTCACTGCACTG
AAACATTTACTCGAAATTCTAGTCTTAAAAGGCATATTGGTAGAATACAC
GAAACTGAAGACTCTGCTAAAGTACAAACAGGAAAAACAATTTGTCTCGA
GTGTGGTACAAAATTTCAGAGAGTCTTGGAACTATCTAAACATCTAGAGG
AGAAACATTCCAAAATTCTTCGTAATGAAACATTGCATTTTGGAAGTCAT
CAAGaatttttaGATTGGAAGAGCGATCTTGAGGAACAAAGTAAATGTAG
CTATACATCATATGGTGGATGGACGGGGAAGGATGGAGTCAAGCATACTG
CCTTCAGGTGCTCAAGAAGTggtttttacaaaaagaaaagatctGGGAGA
AGGAGAAGAACTAAAACAAGTGGAACCTgcaaaatagacaacaactgtAC
ATCAGTAATCAAAATTACTGAAGACCCTCAATCCGATGCATTGACTGTTG
ATGTTTGCTACACCCACTACTCGCACAGTGTTCAGTTAGAGCATGTATGG
TTATCTAAAAGGCAACGTCATGAAGTTGCTGCTCAACTGTCACGTAAAGT
GCCCAGAGAGACGATTTTGGATAACATTCGAGAGGGTGGTGTGGTTGAAT
TGAATCGTTTACATCTTCTAGAGAAAAAGGATATACGTAACATCGCCGTA
GCTTTCAATATTGATGACATCAGAAGACACGAAAATGATCAGAATAGTTT
GTTATCATGGATAGAAGAATGGAAAAACGAAGCTCATAATCCTATTCTAT
TTTACAAGATTCAAGGGAAAGCTTCAGAAGAAACCTAAAGACTTCATGAT
TGTGATTCAAACGGATCATCAAAAGTACTTAGCCAATGAATTTTCCAAGA
ATGGCGTATGTTGTGATTCCACCCACAAAACCAATGGCTATGACTTTTCC
CTTAACACGCTTTTGGTGGTGGACGAATTTGGAGAAGGACAACCAATCGC
ATGGTGCTTAACCAATCATGAGACCTACGAATTTATCTCCTTCTTTTTTG
AACATGTGAaaagaaacaatggaaacaTGACTCCGGCTTGGTTTATGAGT
GATCTCGCGAGCCAATACCACGAGGCATTTGAAAATGTGTTCCAAATTAC
GGTCCGCTGGCTATGGTGTACATGGCATGTCGACAGAGCCTGGAAAGCAG
CTTTAATAGTTGTTAAAGATTTGGAATTACAAGCAGAACTTTACAAAATG
TTTCGCACAATACTTGAAGAGACCAATGAAGATGAATTCCTGCGACTAGA
AGGAGTCATGGCAACAAAATTGGAATCACTTAAGTCGAGACATGATACGA
AGGATTTAGCCAATTATTTTGAAAGTTCGTGGAGACGAAAGCGGAGGAAT
TGGGGATATGCGTACCGTTTGGGAGATGGTATAAACACTAACATGTTTGT
TGAGGCATTCCATCGCGTTTTCAAATATCAATACTTGAACGGAAAACAAA
ACAAGCGATTAGATAAAGCAGTGTTCAATCTTGTAAAATACAGCAGAAAT
AGTGTCTTCCATCGTCTTATTAAATTGACCAAAGGTAAAAACACGTACCG
CTCAGACGTCATTTATGACAGGCACAAAAGAAGCTTGACAATGGCAACAG
AAGTAAATCAAATCAATGACAACAAATGGTCAATCGTTTCAGAGAATCAT
AAAACTAAGAGATACGAAATCAAATTGGTTCAGAAGGACAAATGCAGGGA
GGCAACTTGCAGGCTAATGTGTACCGATTGTCAATTTTGTATTCACCAGT
ACACCTGCACATGTATCGATTCTCTCATGAATAGCTTGAGCTGCAAACAT
GTGCATTACCTACATCAACTTGTAAACTTGAACTCAGCCGTGGAAGAAAA
CTTGACAGATGAACAGAACATTGTACAGAGTCCTCTACAAAGATACGTAA
AGATAAAAAATGATATCAACACTATCATTCAAAGCCTTCCAAACGACGAA
AATATTGACAACGTAGCCAAGATTAAAAGAAACATCGAACAAGTCATTGG
CCAATTAACTTTGGAGTATACAAACGCTGGCAATGCTGGCAATTTGAAGA
CTTTATTAAAAGATTTGAATTCTGCACGATACACTTTTGCGTCATTGGAA
AAGAACAAGCTGCAGCCATATATTGCCCCAAATAAAACACATTGGAATAA
GAACATCGAAAAGCAGCCACGGTTTTTCTCCACAAAAAAGAAAAGAAAAC
GAAACAGATGTAAATTGGCCAAACCTACAGCGGCTGAGAAAAAGTCATTA
TTCAGCCAACCAATTAACCTCCAAAATGAAGGTCAAAAAGAACCTGATGA
AACACCAATGGTGGATATCAGCAGTAACCAAAATGAAGGTCAAGGAGAAC
ACAATGCAAAACCACTGATGATTAACAGCAGTGACCAACACCCAGACGGT
GACAGTACCAATACAATCCAAAGAACACCaatatGTGATCCCAACAAAGT
TAACCACCTATTGAACATCCGACCATTTGGCTTGCGCCccaaaattcaag
aaatccCAGATGAAATAATAAACTACAACATCGAACATTTGGAGAGCAGA
TTGGATAAAGAGAATTGGGAAAAGCTTAAAACAAAAGTCCAGAGCATGCA
TGACTTTTGGAGATGTTATCATTGCAAATGCGCATGGTTTGCAAATATGG
TTGAGTGTGAAGAGTGTGGAAAATGGTTTCATTGGCAATGTGTTTTTATC
AGCAATGAAGCCCCAGAAAATTGGATTTGTCAGCAATGTGCAGGTGGTag
taagaagaaaaaaagaactaGTGCACATCAGGAGCGAAAATAAAGGAAAT
TCAAATCACCTTATGTTTATTTTCacagattttgattttataattttaaa
gtTTCTTATTTTTAGCAGAAGGTGATAAATCAACCCTTATCGTCCGCACA
TTCTTAGCTCCCATTTTTGCCCAATTatgcaaaaatgggtgctgtgTATG
TGCGGATggtaagggtaggttttttcacctttcaaagtctctaagggtaa
aaaaattcagaaagttttaaattagtctctctaagggttggaaagttaaa
gatttttaggaaattttcttgatttcgagagaataaattgtaaaaaagtc
tctcctaagggtcaccttttcagcaaaaatcagtctctctataAAGGATC
GGTTTTCCGAGGTCCCGTCCgcgttttcggaggtcccgtccgcgttttcg
gaggtcccgttcGCGTTTTCGGAGGTCTCGTTCGCGTTTTCGGAGGTCTC
GTTCGCGTTTTCGGAGGTCTCGTTCgcgttttcggaggtcccgtctgCAC
ATACTCCTCATTCACCTagtactctcaggtacctaatagccagggttgga
ataagcagggggattgaaaaaaatctcaaaacttaataagcg
Run BLAST on NCBI

transcript from alignment at sc0002427:3435..12674+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040436 ID=TCONS_00040436|Name=TCONS_00040436|organism=Clytia hemisphaerica|type=transcript|length=9240bp|location=Sequence derived from alignment at sc0002427:3435..12674+ (Clytia hemisphaerica)
ccgttttgagctattttacagtaggtagtaagtagtaggtagtaagtatt
aagtagtaggtagtaggcgttttgtacttgccggtTGATTATGGATTAAT
TATGAGTTATCAATTGGAAAAAGCTAtcataaactattgcaagaactctc
gaaacaaaacatgaCCATagtataatgtcaagatgtcaattaatgtgttc
aaaaaagttgtaaaaaaattACCTCTATAATTCTGAATCcattgctcgtg
tttaaaaaaatgttaacaattttgaaagaccccatcggactTAGGCAAGG
CTGttagatttaggaccactcacggtatggTTTTGTATTGagtggggggg
gggtcttgtatacaaaaaaaaatgcaaCAAGTTGCATCACTACTGCTGGC
CGGCTTTGGAGAGCAGGAAACTTGGTTAGAACAAGGACAGTATGATcaat
tcaaataatttttatttctacaGCATACATTATTTGATGATGACCTATTA
AAGACCTTTACACGCTATCATGCATACAAATACAGAGATGTACCAACAAG
ACAAATACGTGAACATCAGATGTGCCACTCAACTAGTCAACCTATGTATA
TAGATCCCTTCAAAGCACCTTTTCTACCTCCTGAAACACATCTCCTTAGT
TGGAGTAGTATTTTGGGTAATGCAAATACCATTGCTTCAGGACATTGGTT
TATTGAGACAGAAGTAGGAAAACTTTCATGGGATTGTGTTCAAAAATTCC
TTCAGTTGCACAAAATAAAGGAACTAAAGAAAGAGGTGTCAAGTGAAATT
GATTGGTTTAATGACAGTTGCCAAACTCCAAATTCGATTGGGCATCCACC
CTCTCAAGCTGTTATAAACAGCTTTCGATCATTCCTTTTAAATGAACCTG
CAAAACAAGTGTGTAGTAACTACTTGATGTCAGCAATGGAAATGAGTGCT
CTGTGTGTCAAAAGGTTGGTTTATGGCAGCCAGATACTCTGGTTTTCTCA
TCAGCTAAACAAACAGCAAAAGGAAACTTTGTGTGTTTATCTAAATATGA
CAAAGGAGATAAGATGTTCCAATATTTCTGAATATAAAAGACTTTGTTTT
TTCATCAACGTTGGGCGGTATGTCAACAAGGAAACTTTTATTGCTAATGC
GGCTCAAGGGAAACAAGGGTctcattgggtttgtttttttgttgataTGG
AAAGCAAATGTGGTCTTTATGGAGATTCCCTTGGTTGGCCCATGCCTGGT
GACCTGAAAGAACAAATTGAACAAATGTGTAGAAAGAAGATACCTGGATT
TAGCATTAACACTATCAAGTATGCCCACCAACCAGAAAACCATTCTTCAG
CAAAAACTAGATGCGGTGAAAACTGCATCCGTTATCCACTACAAACATGT
GGAAATATATGTGGAATTATATCCATTGTTATTGCAGCAATATACTGCCT
TAGTCATGATTATTTCCGGCAGATTACAGAAAGAACATCAATCAAACCAA
AGCCGAAATTTTCTGATGAAACCAACTTTCTTCAACAATTATTTGAGACG
AGTTGTTATTGCATGGATCACAACAAAGCATATTGATATTCACAATGTAT
GTCCAGATGCAACTACGGATGTCATCTCTCCAGATTCAGATTCTGATTCA
GATTCAGAAATCCCACGGcttaaagaagaaatttttgttaaaCTAGAGCC
TTCTAAAGCAGCTGAAACTGAAAAAGGAGGAGAAAAGATTGCTCCAAAAG
CTAAGACTAAAAAAGAAGTGAAAAATACCATACCTGTTCCTTCGAAATCT
GAGACTgagaaaaaaggagaaaatatcACACCTGCTCCTACAGAAGAAGC
TGAGGCTGAAAAGAGAAACAAAAAAAGGATTTCTTGCCCTCACTGCACTG
AAACATTTACTCGAAATTCTAGTCTTAAAAGGCATATTGGTAGAATACAC
GAAACTGAAGACTCTGCTAAAGTACAAACAGGAAAAACAATTTGTCTCGA
GTGTGGTACAAAATTTCAGAGAGTCTTGGAACTATCTAAACATCTAGAGG
AGAAACATTCCAAAATTCTTCGTAATGAAACATTGCATTTTGGAAGTCAT
CAAGGTATTGTGTTTTATTTTGACTTAATTCAGATTTTTACTTGGACAAC
ATTGATTACTTTTAATGAGAAAAGAGAAATTTCTTTCTGCTAGATCTTTT
CCCATACCTGATACTTTACGTTATAAGATATCAATGACTTCTTCAACTGG
ACATGACATACAAATGTAACATTCTTGACTTACACTTACATAGATTTACA
AAACCTTCTTACAAGACACATGGACAAAAGacgattataatttttttctc
acataCAGTGTTCAAGTTGATATATTGCTGAGCAATAATAGACAGGTAGA
TGACAATTTGCTTTACTTTGACAAGTTTGATATATTAGTCACATAATACG
TGTACGAACATCATCCTGACATATATGACTTACAAATACTAATGATCATT
ATTGACTGTTTACAAAGTCTATCTTTCGCAATTTATCCAAGGTGTTGAAT
TTTAAGTGGATAGCCTTAGTGCATAACATATTTGGAACTGAACATTGAAA
TAAAGATTTCATAAGTACTAAATGATATCTATACTTTAGATTCTTTAAAA
GCTGACATCATATATTCAATGAGGTGCCTTCTTATGATGTTAATGTCAGC
CTTGATTAGACTACACAACATAAAAAGTGAATTTCCATGGAAAgacaaaa
tccaaatttattttcacttttttacagaatttttaGATTGGAAGAGCGAT
CTTGAGGAACAAAGTAAATGTAGCTATACATCATATGGTGGATGGACGGG
GAAGGATGGAGTCAAGCATACTGCCTTCAGGTGCTCAAGAAGTggttttt
acaaaaagaaaagatctGGGAGAAGGAGAAGAACTAAAACAAGTGGTAAA
TTTCTAATTGATGATAATAAGATGATTATCCAGAAGTATTTTCTCAACAA
ATCTTTGCTAGAGAGCTTTCAAATGATTTCTTTGTGTTGTATTTCATTAA
TACttactttctttatttttgttagGAACCTgcaaaatagacaacaactg
tACATCAGTAATCAAAATTACTGAAGACCCTCAATCCGATGCATTGACTG
TTGATGTTTGCTACACCCACTACTCGCACAGTGTTCAGTTAGAGCATGTA
TGGTTATCTAAAAGGTATCACACTGTATTTGCTTTAGTAATGTTGAACAT
ATATGGAGAATTATCACTGAAAGAATATCTTGAATAAATTACttctcgta
ttcaaacaatttctgTGGTGATTAtttcccttgagacattaaatgattgt
tttatgaatagaaaggaGTTTTAATAAAActcgctgggagttaatcacca
tggcaataatttcaaaacaaggcaagtgatgttcgtgacgtaatttatga
aaaggtcaatTGTAGAATAACTGTTACGTAAAACGTTACATACACAAAGA
AATAAATAGATTTGTTGCCATTTTTTTATAGGCAACGTCATGAAGTTGCT
GCTCAACTGTCACGTAAAGTGCCCAGAGAGACGATTTTGGATAACATTCG
AGAGGGTGGTGTGGTTGAATTGAATCGTTTACATCTTCTAGAGAAAAAGG
ATATACGTAAGGAATAAGCTCTATAGCTCGTTCGACTCGATATTGATTTC
CATAACTTTGttaaattattattaattatGTTTGATTAATACTATGCTTT
TAGGTGAGGTTCAGAACTAGGGAGGTCTTTTTTTTTACTaccctgtacca
ccccttaaattttgatctagttggtaattttttaagaaatttggcacaca
agaggTATTTCTATCTGTGTTCATAGGTAACATCGCCGTAGCTTTCAATA
TTGATGACATCAGAAGACACGAAAATGATCAGAATAGTTTGTTATCATGG
ATAGAAGAATGGAAAAACGAAGCTCATAATCCTATTCTATTTTACAAGAT
TCAAGGCATCCATCTATATTTTATCACATGTCATTTTAATAAATAGCAAA
CAAATTCTTAAAAACTGCTCAAAACGTGAAATGAAAAGTTATGAGAGTGT
TTGTGCCCATCATAGATCAATAAATAAAATGATGTTTCTGTGTTTTAAAT
TTATCTTACAAACCTTCGGTTAAATCAGCTTATATGATCATAGATTCTGT
TTTAAATGTAATCAATAAAGTACACTCTTCTTTCAAGTTTCTGGTGTTAA
TTGAATATACCAATaattgtcaaaaaatattttcagagggGATTAAAACT
AAGAATTAAATCTTATATCTTTGGTAGACTCACAATAATAACCTTCTTGT
TAACAGGGAAAGCTTCAGAAGAAACCTAAAGACTTCATGATTGTGATTCA
AACGGATCATCAAAAGTACTTAGCCAATGAATTTTCCAAGAATGGCGTAT
GTTGTGATTCCACCCACAAAACCAATGGCTATGACTTTTCCCTTAACACG
CTTTTGGTGGTGGACGAATTTGGAGAAGGACAACCAATCGCATGGTGCTT
AACCAATCATGAGACCTACGAATTTATCTCCTTCTTTTTTGAACATGTGA
aaagaaacaatggaaacaTGACTCCGGCTTGGTTTATGAGTGATCTCGGT
ATTATTTATAAATAATTCTTAATTTTCACACTAGTTCATATATTCTATTC
TATTAGCATGGTTTTTAATACGCATGTTATACACTAGGTTcttgaagaat
tgaaaagaaTGTAAGAATCATCCAGTATCGCTAAAATCATTGATTTGAGA
CAGAGAGGGAAAAAAGTCTAATATTTTCTATTATGCTTTTTTTTCAGCGA
GCCAATACCACGAGGCATTTGAAAATGTGTTCCAAATTACGGTCCGCTGG
CTATGGTGTACATGGCATGTCGACAGAGCCTGGAAAGCAGCTTTAATAGG
TTGGTAGGCTCTTTTGGTTTTATTCATTTTATGATACTGTATGGTTTTTT
AGATCAGATTTCATGAAGCTGAAATTATATTGAAATTCTAATCAGGTAAT
CAAATGTTATATACAATCTCGTTTTTATAGTTGTTAAAGATTTGGAATTA
CAAGCAGAACTTTACAAAATGTTTCGCACAATACTTGAAGAGACCAATGA
AGATGAATTCCTGCGACTAGAAGGAGTCATGGCAACAAAATTGGAATCAC
TTAAGTCGAGACATGATACGAAGGATTTAGCCAATTATTTTGAAAGTTCG
TGGAGACGAAAGCGGAGGAATTGGGGATATGCGTACCGTTTGGGAGATGG
TATAAACACTAACATGTTTGTTGAGGCATTCCATCGCGTTTTCAAATATC
AATACTTGAACGGAAAACAAAACAAGCGATTAGATAAAGCAGTGTTCAAT
CTTGTAAAATACAGCAGAAATAGTGTCTTCCATCGTCTTATTAAATTGAC
CAAAGGTAAAAACACGTACCGCTCAGACGTCATTTATGACAGGCACAAAA
GAAGCTTGACAATGGCAACAGAAGTAAATCAAATCAATGACAACAAATGG
TCAATCGTTTCAGAGAATCATAAAACTAAGAGATACGAAATCAAATTGGT
TCAGAAGGACAAATGCAGGGAGGCAACTTGCAGGCTAATGTGTACCGATT
GTCAATTTTGTATTCACCAGTACACCTGCACATGTATCGATTCTCTCATG
AATAGCTTGAGCTGCAAACATGTGCATTACCTACATCAACTTGTAAACTT
GGTTAGAGTTTATTTTTAATATACTTTTAAAGGTTTCAGCTCTACACATC
GGAATATTTTTGTTAATGTGTCTTATCTCATATAAGGTCACAATGGCTAT
AATATGTTCAAAGTTTTCTTTTCTCTTTTTCCTTGTGATAGAAAGTCTCA
TGCAGATATTTTCAAGACTGAAACTTGAAAACTTGTTATTAAAATTTCAC
AATTCAGCATCACAATGATTTAACAAGTATTTTCCTTTAGAACTCAGCCG
TGGAAGAAAACTTGACAGATGAACAGAACATTGTACAGAGTCCTCTACAA
AGATACGTAAAGGTGATTTTTTTTAAACAAATTTTCGTAGAATTTTAATA
CACCTAATAAAAGAAAGGGACTCAATTTTTTTTAGAGGCGGGAACACTTA
AAATACCTTCAAAGCTGCTTATTATTTAATCCATTCTCTAATTTTAGATA
AAAAATGATATCAACACTATCATTCAAAGCCTTCCAAACGACGAAAATAT
TGACAACGTAGCCAAGATTAAAAGAAACATCGAACAAGTCATTGGCCAAT
TAACTTTGGAGTATACAAACGCTGGCAATGCTGGCAATTTGAAGACTTTA
TTAAAAGATTTGAATTCTGCACGGTGTGAAATATTTCATCCTTGTTTATC
CATACTCAATCTCATCATTACTCATAGAAAATAGCATTGCCTATATTTTC
TCCTCTGATACTTCTATTTCAAAACTTCTTTTTCTCCAAGTTAGCAAGCC
TTCATGGGAGGGGGTGTCAAGAGGCATGTCATAAAAATGACATGTTAATT
ATGTAGAAACGAAAATAAAAGAAAAGGAGGTGTGGTAACTTAGGAGATAC
GATTGGCCTCGAACAACAACACATTTGGTCCGGTGGTACCATATAACTTT
ATAAGTTGCTTTCAGATACACTTTTGCGTCATTGGAAAAGAACAAGCTGC
AGCCATATATTGCCCCAAATAAAACACATTGGAATAAGAACATCGAAAAG
CAGCCACGGTTTTTCTCCACAAAAAAGAAAAGAAAACGAAACAGATGTAA
ATTGGCCAAACCTACAGCGGCTGAGAAAAAGTCATTATTCAGCCAACCAA
TTAACCTCCAAAATGAAGGTACCTACTTTTTGGAACACCCCTGTCTCAGT
ATGGGGATTTCCATTGAAGGAGCTAAATGCCGATAGGGATAAAAATATAT
TTTGTAATTTATGGCAATTTTAAGTGGGAATGACGCGTGGATTCGAACCT
GTCGAAAATTCTGTgatacagagcaaagtagattTCTATAAATGAAGCAT
GTAAATTTTAAACTTTAGGTCAAAAAGAACCTGATGAAACACCAATGGTG
GATATCAGCAGTAACCAAAATGAAGGTACAACTTCTATTAGGCCTCTTAG
CATTACCATTTTGAGCTTGATTTGTTGTGTGCGTTGCTGTTCCTTAGAAA
AATAGACATATGCTACTTTTTGGGAGATACCCTGCCATGGTGAGCATTTT
GCTAAGTAAAGGTTAGcctagttttttcattttgacttttcaacttGGGA
AAAAATACAAACCTAGATTTATGCATAATTTAGTCACATTTGTAAATTTT
AGGTCAAGGAGAACACAATGCAAAACCACTGATGATTAACAGCAGTGACC
AACACCCAGGTACAGTCCCTGGGCCACAGAATGCGGTGTTTTTTTCTGAT
CCGAATTCTCACACATAAGAGTATAGTTGTACTATAATTTTTTCGTGGAA
ATAATAAGTTTCTTTCCATAAACATTTCTTCCCCTAAAATAGGGGCGAAA
TTTTTGTGTCTAATTTTGCTTTATAATGcccaattttgaaaagtttccaT
ATGAATCTATGAATCACCTTCAGATTTTATCATGATTTACATTTAGACGG
TGACAGTACCAATACAATCCAAAGAACACCaatatgtaagtattttttat
tttaagtaattatcaagaaaaacaaaatgatcACACAAGTGTTTTTGTTC
ACcaagaaaagtaaaatttagtCTTTTATATTCCAAATGGCTGGAACCCG
AAATCTCAAACGCTGGATTAAAGCATGCCTAGGATAGTAAAGTTTGCTTA
CAAGAAGAGAAAAAGTCCTTTACAACAAACTATTATTATTACCCTTATTG
TTTAACTGTATGCCTCACATAAATAGAAACACAAAAATCTATAGACTAAT
CTTTGTCCAAATGATTTATCTTAGGTGATCCCAACAAAGTTAACCACCTA
TTGAACATCCGACCATTTGGCTTGCGCCccaaaattcaagaaatccCAGA
TGAAATAATAAACTACAACATCGAACATTTGGAGAGCAGATTGGATAAAG
AGAATTGGGAAAAGCTTAAAACAAAAGGTTTGGAATATAACGAAAAGATA
AAGACACCTATGGACCCCTTTCAAATATGCTATTTTAATGAATTGCTTGC
CTATGTATCTATGTTTTGTTTCCAGAAATGTCATAAATCAACCATCTAAA
CATCCCTCCAACTCAttgcatattttttatttactgttttttaaatatat
tcagTCCAGAGCATGCATGACTTTTGGAGATGTTATCATTGCAAATGCGC
ATGGTTTGCAAATATGGTTGAGTGTGAAGAGTGTGGAAAATGGTTTCATT
GGTACGTTTAACTTGTTCAATTATTATGACGCAGCTTTTGTCAAtgattt
tgtcaagaaaataacttttaatttgtaattttatGTTTGATAATAAGCGG
TGTAAATTAAACTACATTATCTAATGTTTTAGGCAATGTGTTTTTATCAG
CAATGAAGCCCCAGAAAATTGGATTTGTCAGCAATGTGCAGGTGGTagta
agaagaaaaaaagaactaGTGCACATCAGGAGCGAAAATAAAGGAAATTC
AAATCACCTTATGTTTATTTTCacagattttgattttataattttaaagt
TTCTTATTTTTAGCAGAAGGTGATAAATCAACCCTTATCGTCCGCACATT
CTTAGCTCCCATTTTTGCCCAATTatgcaaaaatgggtgctgtgTATGTG
CGGATggtaagggtaggttttttcacctttcaaagtctctaagggtaaaa
aaattcagaaagttttaaattagtctctctaagggttggaaagttaaaga
tttttaggaaattttcttgatttcgagagaataaattgtaaaaaagtctc
tcctaagggtcaccttttcagcaaaaatcagtctctctataAAGGATCGG
TTTTCCGAGGTCCCGTCCgcgttttcggaggtcccgtccgcgttttcgga
ggtcccgttcGCGTTTTCGGAGGTCTCGTTCGCGTTTTCGGAGGTCTCGT
TCGCGTTTTCGGAGGTCTCGTTCgcgttttcggaggtcccgtctgCACAT
ACTCCTCATTCACCTagtactctcaggtacctaatagccagggttggaat
aagcagggggattgaaaaaaatctcaaaacttaataagcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024582XLOC_024582Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040436-exon-sc0002427-1491911889:3435..5538TCONS_00040436-exon-sc0002427-1491911889:3435..5538Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:3435..5538TCONS_00040436-exon-sc0002427-1510915933:3435..5538Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:3435..5538TCONS_00040436-exon-sc0002427-1575043694:3435..5538Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:6212..6379TCONS_00040436-exon-sc0002427-1491911889:6212..6379Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:6212..6379TCONS_00040436-exon-sc0002427-1510915933:6212..6379Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:6212..6379TCONS_00040436-exon-sc0002427-1575043694:6212..6379Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:6510..6648TCONS_00040436-exon-sc0002427-1491911889:6510..6648Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:6510..6648TCONS_00040436-exon-sc0002427-1510915933:6510..6648Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:6510..6648TCONS_00040436-exon-sc0002427-1575043694:6510..6648Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:6966..7090TCONS_00040436-exon-sc0002427-1491911889:6966..7090Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:6966..7090TCONS_00040436-exon-sc0002427-1510915933:6966..7090Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:6966..7090TCONS_00040436-exon-sc0002427-1575043694:6966..7090Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:7311..7439TCONS_00040436-exon-sc0002427-1491911889:7311..7439Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:7311..7439TCONS_00040436-exon-sc0002427-1510915933:7311..7439Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:7311..7439TCONS_00040436-exon-sc0002427-1575043694:7311..7439Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:7791..8082TCONS_00040436-exon-sc0002427-1491911889:7791..8082Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:7791..8082TCONS_00040436-exon-sc0002427-1510915933:7791..8082Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:7791..8082TCONS_00040436-exon-sc0002427-1575043694:7791..8082Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:8282..8383TCONS_00040436-exon-sc0002427-1491911889:8282..8383Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:8282..8383TCONS_00040436-exon-sc0002427-1510915933:8282..8383Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:8282..8383TCONS_00040436-exon-sc0002427-1575043694:8282..8383Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:8515..9185TCONS_00040436-exon-sc0002427-1491911889:8515..9185Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:8515..9185TCONS_00040436-exon-sc0002427-1510915933:8515..9185Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:8515..9185TCONS_00040436-exon-sc0002427-1575043694:8515..9185Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:9425..9496TCONS_00040436-exon-sc0002427-1491911889:9425..9496Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:9425..9496TCONS_00040436-exon-sc0002427-1510915933:9425..9496Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:9425..9496TCONS_00040436-exon-sc0002427-1575043694:9425..9496Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:9632..9807TCONS_00040436-exon-sc0002427-1491911889:9632..9807Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:9632..9807TCONS_00040436-exon-sc0002427-1510915933:9632..9807Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:9632..9807TCONS_00040436-exon-sc0002427-1575043694:9632..9807Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:10100..10302TCONS_00040436-exon-sc0002427-1491911889:10100..10302Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:10100..10302TCONS_00040436-exon-sc0002427-1510915933:10100..10302Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:10100..10302TCONS_00040436-exon-sc0002427-1575043694:10100..10302Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:10503..10559TCONS_00040436-exon-sc0002427-1491911889:10503..10559Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:10503..10559TCONS_00040436-exon-sc0002427-1510915933:10503..10559Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:10503..10559TCONS_00040436-exon-sc0002427-1575043694:10503..10559Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:10787..10843TCONS_00040436-exon-sc0002427-1491911889:10787..10843Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:10787..10843TCONS_00040436-exon-sc0002427-1510915933:10787..10843Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:10787..10843TCONS_00040436-exon-sc0002427-1575043694:10787..10843Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:11081..11119TCONS_00040436-exon-sc0002427-1491911889:11081..11119Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:11081..11119TCONS_00040436-exon-sc0002427-1510915933:11081..11119Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:11081..11119TCONS_00040436-exon-sc0002427-1575043694:11081..11119Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:11409..11561TCONS_00040436-exon-sc0002427-1491911889:11409..11561Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:11409..11561TCONS_00040436-exon-sc0002427-1510915933:11409..11561Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:11409..11561TCONS_00040436-exon-sc0002427-1575043694:11409..11561Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:11739..11835TCONS_00040436-exon-sc0002427-1491911889:11739..11835Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:11739..11835TCONS_00040436-exon-sc0002427-1510915933:11739..11835Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:11739..11835TCONS_00040436-exon-sc0002427-1575043694:11739..11835Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1491911889:11967..12674TCONS_00040436-exon-sc0002427-1491911889:11967..12674Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1510915933:11967..12674TCONS_00040436-exon-sc0002427-1510915933:11967..12674Clytia hemisphaericaexon
TCONS_00040436-exon-sc0002427-1575043694:11967..12674TCONS_00040436-exon-sc0002427-1575043694:11967..12674Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002427supercontigsc0002427:3435..12674 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0420263	0.0120602	0.0279651	0.0881821	1.05449	2.44241	3.63144	4.33682	2.09626	3.85818e-06	2.57914	1.27702	1.29608	0.542616	0.039768	0.0638652	0.0419775	0.0161971	0.0449547	0.023361	0.0337956	0.039639	0.0720504	0.0364649	1.60347	4.07178	0.0768975	0.0205358	0.0393633	0.0402048
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040436 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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