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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040405 ID=TCONS_00040405|Name=TCONS_00040405|organism=Clytia hemisphaerica|type=transcript|length=1071bp
CATGGTAAAGAACAAAAGAACAACAATTAACGAATAAAGAACAACAATTT
CACCCGTCTGCAACCCAACCAGGACAGAGTGAGCCACCCCTACATATTCA
TTCCTCTGCAAACGCTTGATGAACTGAATGTCTTATACAACATAACATCG
TGTTCTGCAAAAGATATATAACTGTAGTCTGCTTGAGTTTATAATCATTT
AATTTATAGTAAAAGGCTGAAAGGTCCATTATTTAGTTTCAAATAGTCTA
AAATCCCTGTGACAATTGGCCAAGCCGCTAAGCAATGTCAATTTAATAAC
GTACCTGTCCCAGTTTAGAAGTTGGccaattatttattttgatcatgtga
tcgATGTATGATATTCTAGTGACTATGcactaagtaagtaagtctacAAC
CATCACAtcacaatttcaaaattatgaTGTAATTGAGGCAAATAAACCAA
TCAGGTGCTCATAAAAGCGTTTGATTGTTAGGCGAACTTTTGGATTGTAA
GGCAGTTCTACGGTATCTACCTGCCCAAAGGTATGAGAGGTGCCACCTTT
TCTCtgtggattgctccacttacccttgatccttctcctAATTGCTGAGC
ATTAGAGATACCATTTTGTAGTAGTAAGTTAAGTCTTTGGTATAACCTTG
CCAAAAATGATCTACCTTTGCACAACAGTCTGGTCAGCTAATTTCCCGAT
CAAAGAGGTAACACTAAATTAATTTGAGGTTTCATCTTTCCTGTCTCTTC
ACAGTGATCTTGCTGTGATTTGAGAGGACAAGGTTTTTTTTGAGTCACAC
AAAGTCACAAAATGGTATCCTGATTAGGAAAAAGTCTATAATATGTAAAA
TGATCCTGCAGTGTCCTGCATCAATGCCTCAAAAACAACTACCAGAAGGA
TAAAACTAAACCCTGTCacagatttttttgtttactgttGGCTCAATTTT
GCTGCTTGTACTCCTGGCAAGTAAgtagttgaaaacaaaacaaaacaaca
agatCACGAGTTGAAGAGTaccaataaaataaaagattaaattttttctt
gccaaaaacaacaaattattg Run BLAST on NCBI transcript from alignment at sc0002413:22279..23349 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040405 ID=TCONS_00040405|Name=TCONS_00040405|organism=Clytia hemisphaerica|type=transcript|length=1071bp|location=Sequence derived from alignment at sc0002413:22279..23349 (Clytia hemisphaerica)
caataatttgttgtttttggcaagaaaaaatttaatcttttattttattg
gtACTCTTCAACTCGTGatcttgttgttttgttttgttttcaactacTTA
CTTGCCAGGAGTACAAGCAGCAAAATTGAGCCaacagtaaacaaaaaaat
ctgtGACAGGGTTTAGTTTTATCCTTCTGGTAGTTGTTTTTGAGGCATTG
ATGCAGGACACTGCAGGATCATTTTACATATTATAGACTTTTTCCTAATC
AGGATACCATTTTGTGACTTTGTGTGACTCAAAAAAAACCTTGTCCTCTC
AAATCACAGCAAGATCACTGTGAAGAGACAGGAAAGATGAAACCTCAAAT
TAATTTAGTGTTACCTCTTTGATCGGGAAATTAGCTGACCAGACTGTTGT
GCAAAGGTAGATCATTTTTGGCAAGGTTATACCAAAGACTTAACTTACTA
CTACAAAATGGTATCTCTAATGCTCAGCAATTaggagaaggatcaagggt
aagtggagcaatccacaGAGAAAAGGTGGCACCTCTCATACCTTTGGGCA
GGTAGATACCGTAGAACTGCCTTACAATCCAAAAGTTCGCCTAACAATCA
AACGCTTTTATGAGCACCTGATTGGTTTATTTGCCTCAATTACAtcataa
ttttgaaattgtgaTGTGATGGTTgtagacttacttacttagtgCATAGT
CACTAGAATATCATACATcgatcacatgatcaaaataaataattggCCAA
CTTCTAAACTGGGACAGGTACGTTATTAAATTGACATTGCTTAGCGGCTT
GGCCAATTGTCACAGGGATTTTAGACTATTTGAAACTAAATAATGGACCT
TTCAGCCTTTTACTATAAATTAAATGATTATAAACTCAAGCAGACTACAG
TTATATATCTTTTGCAGAACACGATGTTATGTTGTATAAGACATTCAGTT
CATCAAGCGTTTGCAGAGGAATGAATATGTAGGGGTGGCTCACTCTGTCC
TGGTTGGGTTGCAGACGGGTGAAATTGTTGTTCTTTATTCGTTAATTGTT
GTTCTTTTGTTCTTTACCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040405-exon-sc0002413-1491911889:22279..23349 | TCONS_00040405-exon-sc0002413-1491911889:22279..23349 | Clytia hemisphaerica | exon |
| TCONS_00040405-exon-sc0002413-1510915933:22279..23349 | TCONS_00040405-exon-sc0002413-1510915933:22279..23349 | Clytia hemisphaerica | exon |
| TCONS_00040405-exon-sc0002413-1575043694:22279..23349 | TCONS_00040405-exon-sc0002413-1575043694:22279..23349 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002413 | supercontig | sc0002413:22279..23349 . |
Blast
The following BLAST results are available for this feature:
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