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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040401 ID=TCONS_00040401|Name=TCONS_00040401|organism=Clytia hemisphaerica|type=transcript|length=685bp
NNacaagacaagacaagacaagacaagacaagacaagacaagacaaaAAC
ATAACacgacatgacatgacatgagaATACCTACCATtagcttacacagc
attttttaaacaaaaaacaactttcCCTCTCTCCCTTCACAAAACTTGAG
AACATTCAAATGTTACAAGATGGATTCTAATGTTAATTATGTCAGAGCAA
AAGGCGTGCTTTTgatatcataaaaaaataatatctttcaATATCACTTT
ACCCTCAAGTTGAAAATTGTGCTCGGCTGTGCCATTATTACACATATTTG
TAAAATGGTCTTCTTATTTTATAGATATATTTCAAGTTTGTGCTGTTGGC
TACTTCATTGGATTGAGCGTGAACCTCTGTCTTGATGGGGAAGTGGTATC
ACACTTCACCAGCAACAGCCAAGGGATAAATATTCTAATCCAAGGGGACG
AGATATTTGCCTTGTCCCTTACTCAAGATACCTTGCCAATAGATTGTAAT
CGACACAATCCATTCTGCTGCTCCGAAAGCGATGGAGACGAAACATTTTC
TTGCCCTAATTGCCTCCTTGACTACCATTCGGTCTGTGCCGATAGGTTTT
CCGACTGTGGTTGTGTACAAGAaggaaaagaattaaaataccGAGTAAGA
ACTGCCATAAAAGAAAAGGCGCTCCAACTAACGat Run BLAST on NCBI transcript from alignment at sc0002413:17070..18085- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040401 ID=TCONS_00040401|Name=TCONS_00040401|organism=Clytia hemisphaerica|type=transcript|length=1016bp|location=Sequence derived from alignment at sc0002413:17070..18085- (Clytia hemisphaerica)
NNACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAGACAAAAAC
ATAACACGACATGACATGACATGAGAATACCTACCATTAGCTTACACAGC
ATTTTTTAAACAAAAAACAACTTTCCCTCTCTCCCTTCACAAAACTTGAG
AACATTCAAATGTTACAAGATGGATTCTAATGTTAATTATGTCAGAGCAA
AAGGCGTGCTTTTGATATCATAAAAAAATAATATCTTTCAATATCACTTT
ACCCTCAAGTTGAAAATTGTGCTCGGCTGTGCCATTATTACACATATTTG
TAAAATGGTCTTCTTATTTTATAGATATATTTCAAGTTTGTGCTGTTGGC
TACTTCATTGGATTGAGCGTGAACCTCTGTCTTGATGGGGAAGTGGTATC
ACACTTCACCAGCAACAGCCAAGGGATAAATATTCTAATCCAAGGGGACG
AGATATTTGCCTTGTCCCTTACTCAAGGTAAAAGTCCTATTTTTTATATT
GTTTACATTGCTTTCAGATAAGCTTTTTTTCGAATCGAAATTTTTTCAGT
ATATGTATGGTATAACCTGATTATTGACTCTTGAACTTATTTTCTGAACT
CCAGATACCTTGCCAATAGATTGTAATCGACACAATCCATTCTGCTGCTC
CGAAAGCGATGGAGACGAAACATTTTCTTGCCCTAATTGCCTCCTTGACT
ACCATTCGGTCTGTGCCGATAGGTTTTCCGACTGTGGTTGTGTACAAGAA
GGAAAAGAATTAAAATACCGGTAAGTCTAAGTGGTCGATTTTACCATATT
TCTCTACTATTTGATAAAAGTTTTCAGTAGTCATTTTTAGCAGTTTATTG
CTAGGAGCTTGAGATAAAAATTCTGTGTAATGGCTCCTGCCATCGATTTC
TCAACCAATCCATCAATATGCGCCATGTTTTCAATTGTAACTTACACCAA
TGTTTTATTTTGATTTCCTTTCAGAGTAAGAACTGCCATAAAAGAAAAGG
CGCTCCAACTAACGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040401-exon-sc0002413-1575043694:17609..18085 | TCONS_00040401-exon-sc0002413-1575043694:17609..18085 | Clytia hemisphaerica | exon |
| TCONS_00040401-exon-sc0002413-1575043694:17316..17481 | TCONS_00040401-exon-sc0002413-1575043694:17316..17481 | Clytia hemisphaerica | exon |
| TCONS_00040401-exon-sc0002413-1575043694:17070..17111 | TCONS_00040401-exon-sc0002413-1575043694:17070..17111 | Clytia hemisphaerica | exon |
| TCONS_00040401-exon-sc0002413-1510915933:17609..18085 | TCONS_00040401-exon-sc0002413-1510915933:17609..18085 | Clytia hemisphaerica | exon |
| TCONS_00040401-exon-sc0002413-1510915933:17316..17481 | TCONS_00040401-exon-sc0002413-1510915933:17316..17481 | Clytia hemisphaerica | exon |
| TCONS_00040401-exon-sc0002413-1510915933:17070..17111 | TCONS_00040401-exon-sc0002413-1510915933:17070..17111 | Clytia hemisphaerica | exon |
| TCONS_00040401-exon-sc0002413-1491911889:17609..18085 | TCONS_00040401-exon-sc0002413-1491911889:17609..18085 | Clytia hemisphaerica | exon |
| TCONS_00040401-exon-sc0002413-1491911889:17316..17481 | TCONS_00040401-exon-sc0002413-1491911889:17316..17481 | Clytia hemisphaerica | exon |
| TCONS_00040401-exon-sc0002413-1491911889:17070..17111 | TCONS_00040401-exon-sc0002413-1491911889:17070..17111 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002413 | supercontig | sc0002413:17070..18085 - |
Blast
The following BLAST results are available for this feature:
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