TCONS_00040395 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040395
Unique NameTCONS_00040395
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1628

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040395 ID=TCONS_00040395|Name=TCONS_00040395|organism=Clytia hemisphaerica|type=transcript|length=1628bp
GTTTTTGTTCATTGTGATCAAGAATTAAGGTCTACAGTATTAGAAAATTA
CTACTAGTCAATAACCAATCACTactcaaaattcttttgttcctGTATGA
GGACAGGGTAGATCAAcaaggattttcaaaatttcaccattttttctTTC
ACCAGACTTTCATTTTTGAACTAATATTAATGTGGatgtaaaaaactaaa
atcaatGATAGGTCAGGTGATAAGTGATATTAACCCAAATAAATCCTGGA
TCAAAGCATGGTGTGAGAAAAagttagtttttcatttttaagaaaacctt
aacttaaagttttaaatgaagaaaattctaaatttaaTCATGTTATGTTa
gctttttggaaaaagttttgtAAGACCCTGATAATAATCTATCCATATGA
AAAGACAGAGAGAAGAGTTGGAATAAACATAAAGAATAAGGGTATGAGAC
CTAATGGGAGATAATGGAGATTTTTTTGTCTTGATGtctattttttttct
gcaattaTGAAGTCCTCAAATtgccaaaatttaaatttttaatttgatat
cAGAGAAATGAgttacaaaaaaagaaaaaagaagaaatgggACAAAAGTT
TTTCAGACTTATTTCTGGACTGCGATCCGATCCTTGAACAGCTCAGTAAA
GAAGATCAAAGGTGTTTGAGTGCGAAAACTTTAAAAGCAATTGAagattg
gaaaaagaaaaacaataaAGAAACATCGAGTGGTGAGAACTGTGCTACGT
CAAGTGGAAATAAAGATATAAGCAAGGGAACATCAAGTCGTAGCAACAGT
GTTGTATCAAGTGAACGTATAGACATAAGGAAACAATCACCTGAATTCGT
TAGAATCGAGAAGAGACGAACAGTAGCAAAAGCCAAAAAACAAGAAGATG
TTTGCAAAATATACAGGAAACCAGCTTCAAATAAGAACAAGaatcGTGAA
AACTTTGCTCGAAGAATGTCAAGTGAACCTATACAAGATTTAGGGATTCA
AAGCAACGAAGTCCAGCACATGGTGACATTAAATGAAGATTTACCCAGTC
GTGATGAGCCAATGCCCGAAGATACCTCATTTCAACATCATGAGGTTGGA
ATAGAGATCAGAGAAAATAATGATGGCTCGTGTCAGatgtCGATAAAACA
AGACGTGTCGTTTGGATACGAAATCGAAATTAGAAGGCACAAGGCACTCA
TTTCAATTGACAAATATTTCACAAGAGTTGTCGTTCCTGATTACGATGTT
GAAAATTCCCGCTTAAAAAAACGTAAATATGTTATTGTTAGTCGGACCTG
CTGTTCAGATGATGGTGGAAATTCAGTACGTTGGTTGTTTGGGTGTAGTT
GTGATGAAGCCGAATTTGATCTTGTCAATGCTTTGAATTTCGATGCAGGA
CACACGCAAACTGAAGATAGTAAGAAGTTAATTACTTCCACCAGCTCTCA
CGAGATACTCGAAAGTGAATTTGATTTGAACTTATTTTcgtggaattttc
aaaataggaAATTAGCTTATGTTTAGCCGTGCAAACCTTtgtgagcagaa
actttcacgaggTCGAAAAATAGCGAGATTTACGACATTTATAGGATTAA
AATGAGAACTTTTTGGACAAAAACCGGC
Run BLAST on NCBI

protein sequence of TCONS_00040395-protein

>TCONS_00040395-protein ID=TCONS_00040395-protein|Name=TCONS_00040395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MSYKKRKKKKWDKSFSDLFLDCDPILEQLSKEDQRCLSAKTLKAIEDWKK
KNNKETSSGENCATSSGNKDISKGTSSRSNSVVSSERIDIRKQSPEFVRI
EKRRTVAKAKKQEDVCKIYRKPASNKNKNRENFARRMSSEPIQDLGIQSN
EVQHMVTLNEDLPSRDEPMPEDTSFQHHEVGIEIRENNDGSCQMSIKQDV
SFGYEIEIRRHKALISIDKYFTRVVVPDYDVENSRLKKRKYVIVSRTCCS
DDGGNSVRWLFGCSCDEAEFDLVNALNFDAGHTQTEDSKKLITSTSSHEI
LESEFDLNLFSWNFQNRKLAYV
Run BLAST on NCBI

transcript from alignment at sc0002413:6319..9288+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040395 ID=TCONS_00040395|Name=TCONS_00040395|organism=Clytia hemisphaerica|type=transcript|length=2970bp|location=Sequence derived from alignment at sc0002413:6319..9288+ (Clytia hemisphaerica)
GTTTTTGTTCATTGTGATCAAGAATTAAGGTCTACAGTATTAGAAAATTA
CTACTAGTCAATAACCAATCACTactcaaaattcttttgttcctGTATGA
GGACAGGGTAGATCAAcaaggattttcaaaatttcaccattttttctTTC
ACCAGACTTTCATTTTTGAACTAATATTAATGTGGatgtaaaaaactaaa
atcaatGATAGGTCAGGTGATAAGTGATATTAACCCAAATAAATCCTGGA
TCAAAGCATGGTGTGAGAAAAagttagtttttcatttttaagaaaacctt
aacttaaagttttaaatgaagaaaattctaaatttaaTCATGTTATGTTa
gctttttggaaaaagttttgtAAGACCCTGATAATAATCTATCCATATGA
AAAGACAGAGAGAAGAGTTGGAATAAACATAAAGAATAAGGGTATGAGAC
CTAATGGGAGATAATGGAGATTTTTTTGTCTTGATGtctattttttttct
gcaattaTGAAGTCCTCAAATtgccaaaatttaaatttttaatttgatat
cAGAGAAATGAgttacaaaaaaagaaaaaagaagaaatgggACAAAAGTT
TTTCAGACTTATTTCTGGACTGCGATCCGATCCTTGAACAGCTCAGTAAA
GAAGATCAAAGGTGTTTGAGTGCGAAAACTTTAAAAGCAATTGAagattg
gaaaaagaaaaacaagtaaGCCTAAAACTTGTTAATCACAGTGTAAGTAA
ATGACAGGATACGTTTTAGAACAGTGAATAGGAACAATTAACAATGACAT
TGATATACTGGAACCAGTAATTGTAATGTGCATTctatttccaatatttt
ttatttagtaaAGAAACATCGAGTGGTGAGAACTGTGCTACGTCAAGTGG
AAATAAAGATATAAGGTATGTTAAAAAACCTCTTAAGTAACAACGAGAAT
TTGGCATTTATTTCTATAATTTCTATCTGACACCAACTACAATTCTTCTA
TCTACACTTTTAGCAAGGGAACATCAAGTCGTAGCAACAGTGTTGTATCA
AGTGAACGTATAGACATAAGGTATGTTTATGTGATAATTTATGcctgcaa
aatatttcaaagaaaaaggaaagttcAAGGGAATGAAGTATAACGTTTGT
AATTTATATTTACCTTGTAAAGGAAACAATCACCTGAATTCGTTAGAATC
GAGAAGAGACGAACAGTAGCAAAAGCCAAAAAACAAGAAGATGTTTGCAA
AATATACAGGAAACCAGCTTCAAATAAGAACAAGGTATTACTTCgtatat
atattatttttgattcaaaaagtaaaataacATGATTATCAATAGTCTAA
ATAATAACAACAAGGGGACGCTGCAGACcaattcaatatttttacagaat
cGTGAAAACTTTGCTCGAAGAATGTCAAGTGAACCTATACAAGATTTAGG
GATTCAAAGCAACGAAGTCCAGGTAGGCTTTTAATACTACGGTTATTCGT
TATTTTTAGGATTTGACCTAAACGCTGAGCCTGCCCACTTTTGGTTTAGG
GTGggtatttctttaatttttcagatTATGCGCAACCggttcaagttttt
tttatctaagagttttacaagaacatttTGCATGCAAACCGCATGTTTGA
CTTTNTTATCTAAGagttttacaagaacatttTGCATGCAAACCGCATGT
TTGAATTTTAACAGTATTGAGACTTCTTTTGAACTTTCGCCTattaataa
aattcaaattatataGCACATGGTGACATTAAATGAAGATTTACCCAGTC
GTGATGAGCCAATGCCCGAAGATACCTCATTTCAACATCATGAGGTTAGC
CAGGTTTCAGTTGTATTTCTAtgcgaaatttcaaattttttctttgatac
tgattttctaaggtATGGTATGATTTTCTAAGgtatgaaattttaaatga
atttcctaaggggggatTAGCACTTCAgggggtcctcttacctaaggggg
gtaTTGACCCCTCAAGAAACTATGTAATTACATAACATTATTTCCGTATT
TGAAGTATCTGTATTTGAATTCTTAGGTTGGAATAGAGATCAGAGAAAAT
AATGATGGCTCGTGTCAGGTCAGAAATTTTGGATATAAAGAATTATCCTT
TTCAGCTTGGTAAAATTTTCGCgataattttttattctatGGCAAGTGAa
taactttcacaaaaatattttttagatgtCGATAAAACAAGACGTGTCGT
TTGGATACGAAATCGAAATTAGAAGGCACAAGGCACTCATTTCAATTGAC
AAATATTTCACAAGAGTTGTCGTTCCTGATTACGATGTTGAAAATTCCCG
CTTAAAAGTAATTCTAATCCTTGaacttgataaaaaaaaaacgttgcAAA
CATCTGCTTTTTTTCTTCTGTTGAACAATCATGTTTAACACAAAGCTACA
TTGACTtttactttcttcttttcatccttaTGCCTATTTAAGtatgattt
gatttttatactGTGTATACATTTTATTGATGTTTCCCGATGTTTTTGGG
ACGTTGTTCTGGGAGTTATCTAAATATGAaataaaccaatttttttttaa
atatttccagAAACGTAAATATGTTATTGTTAGTCGGACCTGCTGTTCAG
ATGATGGTGGAAATTCAGTACGTTGGTTGTTTGGGTGTAGTTGTGATGAA
GCCGAATTTGATCTTGTCAATGCTTTGAATTTCGATGCAGGACACACGCA
AACTGAAGATAGTAAGAAGTTAATTACTTCCACCAGCTCTCACGAGATAC
TCGAAAGTGAATTTGATTTGAACTTATTTTcgtggaattttcaaaatagg
aAATTAGCTTATGTTTAGCCGTGCAAACCTTtgtgagcagaaactttcac
gaggTCGAAAAATAGCGAGATTTACGACATTTATAGGATTAAAATGAGAA
CTTTTTGGACAAAAACCGGC

Coding sequence (CDS) from alignment at sc0002413:6319..9288+

>TCONS_00040395 ID=TCONS_00040395|Name=TCONS_00040395|organism=Clytia hemisphaerica|type=CDS|length=8721bp|location=Sequence derived from alignment at sc0002413:6319..9288+ (Clytia hemisphaerica)
ATGAgttacaaaaaaagaaaaaagaagaaatgggACAAAAGTTTTTCAGA
CTTATTTCTGGACTGCGATCCGATCCTTGAACAGCTCAGTAAAGAAGATC
AAAGGTGTTTGAGTGCGAAAACTTTAAAAGCAATTGAagattggaaaaag
aaaaacaataaAGAAACATCGAGTGGTGAGAACTGTGCTACGTCAAGTGG
AAATAAAGATATAAGCAAGGGAACATCAAGTCGTAGCAACAGTGTTGTAT
CAAGTGAACGTATAGACATAAGGAAACAATCACCTGAATTCGTTAGAATC
GAGAAGAGACGAACAGTAGCAAAAGCCAAAAAACAAGAAGATGTTTGCAA
AATATACAGGAAACCAGCTTCAAATAAGAACAAGaatcGTGAAAACTTTG
CTCGAAGAATGTCAAGTGAACCTATACAAGATTTAGGGATTCAAAGCAAC
GAAGTCCAGCACATGGTGACATTAAATGAAGATTTACCCAGTCGTGATGA
GCCAATGCCCGAAGATACCTCATTTCAACATCATGAGGTTGGAATAGAGA
TCAGAGAAAATAATGATGGCTCGTGTCAGatgtCGATAAAACAAGACGTG
TCGTTTGGATACGAAATCGAAATTAGAAGGCACAAGGCACTCATTTCAAT
TGACAAATATTTCACAAGAGTTGTCGTTCCTGATTACGATGTTGAAAATT
CCCGCTTAAAAAAACGTAAATATGTTATTGTTAGTCGGACCTGCTGTTCA
GATGATGGTGGAAATTCAGTACGTTGGTTGTTTGGGTGTAGTTGTGATGA
AGCCGAATTTGATCTTGTCAATGCTTTGAATTTCGATGCAGGACACACGC
AAACTGAAGATAGTAAGAAGTTAATTACTTCCACCAGCTCTCACGAGATA
CTCGAAAGTGAATTTGATTTGAACTTATTTTcgtggaattttcaaaatag
gaAATTAGCTTATGTTTAGATGAgttacaaaaaaagaaaaaagaagaaat
gggACAAAAGTTTTTCAGACTTATTTCTGGACTGCGATCCGATCCTTGAA
CAGCTCAGTAAAGAAGATCAAAGGTGTTTGAGTGCGAAAACTTTAAAAGC
AATTGAagattggaaaaagaaaaacaataaAGAAACATCGAGTGGTGAGA
ACTGTGCTACGTCAAGTGGAAATAAAGATATAAGCAAGGGAACATCAAGT
CGTAGCAACAGTGTTGTATCAAGTGAACGTATAGACATAAGGAAACAATC
ACCTGAATTCGTTAGAATCGAGAAGAGACGAACAGTAGCAAAAGCCAAAA
AACAAGAAGATGTTTGCAAAATATACAGGAAACCAGCTTCAAATAAGAAC
AAGaatcGTGAAAACTTTGCTCGAAGAATGTCAAGTGAACCTATACAAGA
TTTAGGGATTCAAAGCAACGAAGTCCAGCACATGGTGACATTAAATGAAG
ATTTACCCAGTCGTGATGAGCCAATGCCCGAAGATACCTCATTTCAACAT
CATGAGGTTGGAATAGAGATCAGAGAAAATAATGATGGCTCGTGTCAGat
gtCGATAAAACAAGACGTGTCGTTTGGATACGAAATCGAAATTAGAAGGC
ACAAGGCACTCATTTCAATTGACAAATATTTCACAAGAGTTGTCGTTCCT
GATTACGATGTTGAAAATTCCCGCTTAAAAAAACGTAAATATGTTATTGT
TAGTCGGACCTGCTGTTCAGATGATGGTGGAAATTCAGTACGTTGGTTGT
TTGGGTGTAGTTGTGATGAAGCCGAATTTGATCTTGTCAATGCTTTGAAT
TTCGATGCAGGACACACGCAAACTGAAGATAGTAAGAAGTTAATTACTTC
CACCAGCTCTCACGAGATACTCGAAAGTGAATTTGATTTGAACTTATTTT
cgtggaattttcaaaataggaAATTAGCTTATGTTTAGATGAgttacaaa
aaaagaaaaaagaagaaatgggACAAAAGTTTTTCAGACTTATTTCTGGA
CTGCGATCCGATCCTTGAACAGCTCAGTAAAGAAGATCAAAGGTGTTTGA
GTGCGAAAACTTTAAAAGCAATTGAagattggaaaaagaaaaacaataaA
GAAACATCGAGTGGTGAGAACTGTGCTACGTCAAGTGGAAATAAAGATAT
AAGCAAGGGAACATCAAGTCGTAGCAACAGTGTTGTATCAAGTGAACGTA
TAGACATAAGGAAACAATCACCTGAATTCGTTAGAATCGAGAAGAGACGA
ACAGTAGCAAAAGCCAAAAAACAAGAAGATGTTTGCAAAATATACAGGAA
ACCAGCTTCAAATAAGAACAAGaatcGTGAAAACTTTGCTCGAAGAATGT
CAAGTGAACCTATACAAGATTTAGGGATTCAAAGCAACGAAGTCCAGCAC
ATGGTGACATTAAATGAAGATTTACCCAGTCGTGATGAGCCAATGCCCGA
AGATACCTCATTTCAACATCATGAGGTTGGAATAGAGATCAGAGAAAATA
ATGATGGCTCGTGTCAGatgtCGATAAAACAAGACGTGTCGTTTGGATAC
GAAATCGAAATTAGAAGGCACAAGGCACTCATTTCAATTGACAAATATTT
CACAAGAGTTGTCGTTCCTGATTACGATGTTGAAAATTCCCGCTTAAAAA
AACGTAAATATGTTATTGTTAGTCGGACCTGCTGTTCAGATGATGGTGGA
AATTCAGTACGTTGGTTGTTTGGGTGTAGTTGTGATGAAGCCGAATTTGA
TCTTGTCAATGCTTTGAATTTCGATGCAGGACACACGCAAACTGAAGATA
GTAAGAAGTTAATTACTTCCACCAGCTCTCACGAGATACTCGAAAGTGAA
TTTGATTTGAACTTATTTTcgtggaattttcaaaataggaAATTAGCTTA
TGTTTAGATGAgttacaaaaaaagaaaaaagaagaaatgggACAAAAGTT
TTTCAGACTTATTTCTGGACTGCGATCCGATCCTTGAACAGCTCAGTAAA
GAAGATCAAAGGTGTTTGAGTGCGAAAACTTTAAAAGCAATTGAagattg
gaaaaagaaaaacaataaAGAAACATCGAGTGGTGAGAACTGTGCTACGT
CAAGTGGAAATAAAGATATAAGCAAGGGAACATCAAGTCGTAGCAACAGT
GTTGTATCAAGTGAACGTATAGACATAAGGAAACAATCACCTGAATTCGT
TAGAATCGAGAAGAGACGAACAGTAGCAAAAGCCAAAAAACAAGAAGATG
TTTGCAAAATATACAGGAAACCAGCTTCAAATAAGAACAAGaatcGTGAA
AACTTTGCTCGAAGAATGTCAAGTGAACCTATACAAGATTTAGGGATTCA
AAGCAACGAAGTCCAGCACATGGTGACATTAAATGAAGATTTACCCAGTC
GTGATGAGCCAATGCCCGAAGATACCTCATTTCAACATCATGAGGTTGGA
ATAGAGATCAGAGAAAATAATGATGGCTCGTGTCAGatgtCGATAAAACA
AGACGTGTCGTTTGGATACGAAATCGAAATTAGAAGGCACAAGGCACTCA
TTTCAATTGACAAATATTTCACAAGAGTTGTCGTTCCTGATTACGATGTT
GAAAATTCCCGCTTAAAAAAACGTAAATATGTTATTGTTAGTCGGACCTG
CTGTTCAGATGATGGTGGAAATTCAGTACGTTGGTTGTTTGGGTGTAGTT
GTGATGAAGCCGAATTTGATCTTGTCAATGCTTTGAATTTCGATGCAGGA
CACACGCAAACTGAAGATAGTAAGAAGTTAATTACTTCCACCAGCTCTCA
CGAGATACTCGAAAGTGAATTTGATTTGAACTTATTTTcgtggaattttc
aaaataggaAATTAGCTTATGTTTAGATGAgttacaaaaaaagaaaaaag
aagaaatgggACAAAAGTTTTTCAGACTTATTTCTGGACTGCGATCCGAT
CCTTGAACAGCTCAGTAAAGAAGATCAAAGGTGTTTGAGTGCGAAAACTT
TAAAAGCAATTGAagattggaaaaagaaaaacaataaAGAAACATCGAGT
GGTGAGAACTGTGCTACGTCAAGTGGAAATAAAGATATAAGCAAGGGAAC
ATCAAGTCGTAGCAACAGTGTTGTATCAAGTGAACGTATAGACATAAGGA
AACAATCACCTGAATTCGTTAGAATCGAGAAGAGACGAACAGTAGCAAAA
GCCAAAAAACAAGAAGATGTTTGCAAAATATACAGGAAACCAGCTTCAAA
TAAGAACAAGaatcGTGAAAACTTTGCTCGAAGAATGTCAAGTGAACCTA
TACAAGATTTAGGGATTCAAAGCAACGAAGTCCAGCACATGGTGACATTA
AATGAAGATTTACCCAGTCGTGATGAGCCAATGCCCGAAGATACCTCATT
TCAACATCATGAGGTTGGAATAGAGATCAGAGAAAATAATGATGGCTCGT
GTCAGatgtCGATAAAACAAGACGTGTCGTTTGGATACGAAATCGAAATT
AGAAGGCACAAGGCACTCATTTCAATTGACAAATATTTCACAAGAGTTGT
CGTTCCTGATTACGATGTTGAAAATTCCCGCTTAAAAAAACGTAAATATG
TTATTGTTAGTCGGACCTGCTGTTCAGATGATGGTGGAAATTCAGTACGT
TGGTTGTTTGGGTGTAGTTGTGATGAAGCCGAATTTGATCTTGTCAATGC
TTTGAATTTCGATGCAGGACACACGCAAACTGAAGATAGTAAGAAGTTAA
TTACTTCCACCAGCTCTCACGAGATACTCGAAAGTGAATTTGATTTGAAC
TTATTTTcgtggaattttcaaaataggaAATTAGCTTATGTTTAGATGAg
ttacaaaaaaagaaaaaagaagaaatgggACAAAAGTTTTTCAGACTTAT
TTCTGGACTGCGATCCGATCCTTGAACAGCTCAGTAAAGAAGATCAAAGG
TGTTTGAGTGCGAAAACTTTAAAAGCAATTGAagattggaaaaagaaaaa
caataaAGAAACATCGAGTGGTGAGAACTGTGCTACGTCAAGTGGAAATA
AAGATATAAGCAAGGGAACATCAAGTCGTAGCAACAGTGTTGTATCAAGT
GAACGTATAGACATAAGGAAACAATCACCTGAATTCGTTAGAATCGAGAA
GAGACGAACAGTAGCAAAAGCCAAAAAACAAGAAGATGTTTGCAAAATAT
ACAGGAAACCAGCTTCAAATAAGAACAAGaatcGTGAAAACTTTGCTCGA
AGAATGTCAAGTGAACCTATACAAGATTTAGGGATTCAAAGCAACGAAGT
CCAGCACATGGTGACATTAAATGAAGATTTACCCAGTCGTGATGAGCCAA
TGCCCGAAGATACCTCATTTCAACATCATGAGGTTGGAATAGAGATCAGA
GAAAATAATGATGGCTCGTGTCAGatgtCGATAAAACAAGACGTGTCGTT
TGGATACGAAATCGAAATTAGAAGGCACAAGGCACTCATTTCAATTGACA
AATATTTCACAAGAGTTGTCGTTCCTGATTACGATGTTGAAAATTCCCGC
TTAAAAAAACGTAAATATGTTATTGTTAGTCGGACCTGCTGTTCAGATGA
TGGTGGAAATTCAGTACGTTGGTTGTTTGGGTGTAGTTGTGATGAAGCCG
AATTTGATCTTGTCAATGCTTTGAATTTCGATGCAGGACACACGCAAACT
GAAGATAGTAAGAAGTTAATTACTTCCACCAGCTCTCACGAGATACTCGA
AAGTGAATTTGATTTGAACTTATTTTcgtggaattttcaaaataggaAAT
TAGCTTATGTTTAGATGAgttacaaaaaaagaaaaaagaagaaatgggAC
AAAAGTTTTTCAGACTTATTTCTGGACTGCGATCCGATCCTTGAACAGCT
CAGTAAAGAAGATCAAAGGTGTTTGAGTGCGAAAACTTTAAAAGCAATTG
AagattggaaaaagaaaaacaataaAGAAACATCGAGTGGTGAGAACTGT
GCTACGTCAAGTGGAAATAAAGATATAAGCAAGGGAACATCAAGTCGTAG
CAACAGTGTTGTATCAAGTGAACGTATAGACATAAGGAAACAATCACCTG
AATTCGTTAGAATCGAGAAGAGACGAACAGTAGCAAAAGCCAAAAAACAA
GAAGATGTTTGCAAAATATACAGGAAACCAGCTTCAAATAAGAACAAGaa
tcGTGAAAACTTTGCTCGAAGAATGTCAAGTGAACCTATACAAGATTTAG
GGATTCAAAGCAACGAAGTCCAGCACATGGTGACATTAAATGAAGATTTA
CCCAGTCGTGATGAGCCAATGCCCGAAGATACCTCATTTCAACATCATGA
GGTTGGAATAGAGATCAGAGAAAATAATGATGGCTCGTGTCAGatgtCGA
TAAAACAAGACGTGTCGTTTGGATACGAAATCGAAATTAGAAGGCACAAG
GCACTCATTTCAATTGACAAATATTTCACAAGAGTTGTCGTTCCTGATTA
CGATGTTGAAAATTCCCGCTTAAAAAAACGTAAATATGTTATTGTTAGTC
GGACCTGCTGTTCAGATGATGGTGGAAATTCAGTACGTTGGTTGTTTGGG
TGTAGTTGTGATGAAGCCGAATTTGATCTTGTCAATGCTTTGAATTTCGA
TGCAGGACACACGCAAACTGAAGATAGTAAGAAGTTAATTACTTCCACCA
GCTCTCACGAGATACTCGAAAGTGAATTTGATTTGAACTTATTTTcgtgg
aattttcaaaataggaAATTAGCTTATGTTTAGATGAgttacaaaaaaag
aaaaaagaagaaatgggACAAAAGTTTTTCAGACTTATTTCTGGACTGCG
ATCCGATCCTTGAACAGCTCAGTAAAGAAGATCAAAGGTGTTTGAGTGCG
AAAACTTTAAAAGCAATTGAagattggaaaaagaaaaacaataaAGAAAC
ATCGAGTGGTGAGAACTGTGCTACGTCAAGTGGAAATAAAGATATAAGCA
AGGGAACATCAAGTCGTAGCAACAGTGTTGTATCAAGTGAACGTATAGAC
ATAAGGAAACAATCACCTGAATTCGTTAGAATCGAGAAGAGACGAACAGT
AGCAAAAGCCAAAAAACAAGAAGATGTTTGCAAAATATACAGGAAACCAG
CTTCAAATAAGAACAAGaatcGTGAAAACTTTGCTCGAAGAATGTCAAGT
GAACCTATACAAGATTTAGGGATTCAAAGCAACGAAGTCCAGCACATGGT
GACATTAAATGAAGATTTACCCAGTCGTGATGAGCCAATGCCCGAAGATA
CCTCATTTCAACATCATGAGGTTGGAATAGAGATCAGAGAAAATAATGAT
GGCTCGTGTCAGatgtCGATAAAACAAGACGTGTCGTTTGGATACGAAAT
CGAAATTAGAAGGCACAAGGCACTCATTTCAATTGACAAATATTTCACAA
GAGTTGTCGTTCCTGATTACGATGTTGAAAATTCCCGCTTAAAAAAACGT
AAATATGTTATTGTTAGTCGGACCTGCTGTTCAGATGATGGTGGAAATTC
AGTACGTTGGTTGTTTGGGTGTAGTTGTGATGAAGCCGAATTTGATCTTG
TCAATGCTTTGAATTTCGATGCAGGACACACGCAAACTGAAGATAGTAAG
AAGTTAATTACTTCCACCAGCTCTCACGAGATACTCGAAAGTGAATTTGA
TTTGAACTTATTTTcgtggaattttcaaaataggaAATTAGCTTATGTTT
AGATGAgttacaaaaaaagaaaaaagaagaaatgggACAAAAGTTTTTCA
GACTTATTTCTGGACTGCGATCCGATCCTTGAACAGCTCAGTAAAGAAGA
TCAAAGGTGTTTGAGTGCGAAAACTTTAAAAGCAATTGAagattggaaaa
agaaaaacaataaAGAAACATCGAGTGGTGAGAACTGTGCTACGTCAAGT
GGAAATAAAGATATAAGCAAGGGAACATCAAGTCGTAGCAACAGTGTTGT
ATCAAGTGAACGTATAGACATAAGGAAACAATCACCTGAATTCGTTAGAA
TCGAGAAGAGACGAACAGTAGCAAAAGCCAAAAAACAAGAAGATGTTTGC
AAAATATACAGGAAACCAGCTTCAAATAAGAACAAGaatcGTGAAAACTT
TGCTCGAAGAATGTCAAGTGAACCTATACAAGATTTAGGGATTCAAAGCA
ACGAAGTCCAGCACATGGTGACATTAAATGAAGATTTACCCAGTCGTGAT
GAGCCAATGCCCGAAGATACCTCATTTCAACATCATGAGGTTGGAATAGA
GATCAGAGAAAATAATGATGGCTCGTGTCAGatgtCGATAAAACAAGACG
TGTCGTTTGGATACGAAATCGAAATTAGAAGGCACAAGGCACTCATTTCA
ATTGACAAATATTTCACAAGAGTTGTCGTTCCTGATTACGATGTTGAAAA
TTCCCGCTTAAAAAAACGTAAATATGTTATTGTTAGTCGGACCTGCTGTT
CAGATGATGGTGGAAATTCAGTACGTTGGTTGTTTGGGTGTAGTTGTGAT
GAAGCCGAATTTGATCTTGTCAATGCTTTGAATTTCGATGCAGGACACAC
GCAAACTGAAGATAGTAAGAAGTTAATTACTTCCACCAGCTCTCACGAGA
TACTCGAAAGTGAATTTGATTTGAACTTATTTTcgtggaattttcaaaat
aggaAATTAGCTTATGTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024551XLOC_024551Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040395-exon-sc0002413-1491911889:6319..7033TCONS_00040395-exon-sc0002413-1491911889:6319..7033Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:6319..7033TCONS_00040395-exon-sc0002413-1510915933:6319..7033Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:6319..7033TCONS_00040395-exon-sc0002413-1575043694:6319..7033Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1491911889:7177..7233TCONS_00040395-exon-sc0002413-1491911889:7177..7233Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:7177..7233TCONS_00040395-exon-sc0002413-1510915933:7177..7233Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:7177..7233TCONS_00040395-exon-sc0002413-1575043694:7177..7233Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1491911889:7332..7388TCONS_00040395-exon-sc0002413-1491911889:7332..7388Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:7332..7388TCONS_00040395-exon-sc0002413-1510915933:7332..7388Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:7332..7388TCONS_00040395-exon-sc0002413-1575043694:7332..7388Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1491911889:7491..7602TCONS_00040395-exon-sc0002413-1491911889:7491..7602Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:7491..7602TCONS_00040395-exon-sc0002413-1510915933:7491..7602Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:7491..7602TCONS_00040395-exon-sc0002413-1575043694:7491..7602Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1491911889:7716..7790TCONS_00040395-exon-sc0002413-1491911889:7716..7790Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:7716..7790TCONS_00040395-exon-sc0002413-1510915933:7716..7790Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:7716..7790TCONS_00040395-exon-sc0002413-1575043694:7716..7790Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1491911889:8085..8162TCONS_00040395-exon-sc0002413-1491911889:8085..8162Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:8085..8162TCONS_00040395-exon-sc0002413-1510915933:8085..8162Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:8085..8162TCONS_00040395-exon-sc0002413-1575043694:8085..8162Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1491911889:8395..8436TCONS_00040395-exon-sc0002413-1491911889:8395..8436Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:8395..8436TCONS_00040395-exon-sc0002413-1510915933:8395..8436Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:8395..8436TCONS_00040395-exon-sc0002413-1575043694:8395..8436Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1491911889:8544..8675TCONS_00040395-exon-sc0002413-1491911889:8544..8675Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:8544..8675TCONS_00040395-exon-sc0002413-1510915933:8544..8675Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:8544..8675TCONS_00040395-exon-sc0002413-1575043694:8544..8675Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1491911889:8929..9288TCONS_00040395-exon-sc0002413-1491911889:8929..9288Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1510915933:8929..9288TCONS_00040395-exon-sc0002413-1510915933:8929..9288Clytia hemisphaericaexon
TCONS_00040395-exon-sc0002413-1575043694:8929..9288TCONS_00040395-exon-sc0002413-1575043694:8929..9288Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040395-proteinTCONS_00040395-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002413supercontigsc0002413:6319..9288 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0250019	0.0584398	0.133233	0.166173	1.20733	1.24102	0.65835	1.90718	1.12475	0.824596	0.0809458	0.435709	0.208214	0.435008	0.237712	0.10178	0.369053	0.535779	0.331253	0.385128	0.605788	0.671618	0.500621	0.488802	1.20357	1.15787	0.619171	0.117958	0.529497	0.0843119
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040395 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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