TCONS_00040390 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040390
Unique NameTCONS_00040390
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length91

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040390 ID=TCONS_00040390|Name=TCONS_00040390|organism=Clytia hemisphaerica|type=transcript|length=91bp
NNAAGGAGaaagatggaaatttttaaaaggagGTATAGTGAAGGGACCTT
TTGTGTGTCCCCTGTTCATCTCTTTGAGAATGGCTGTAGaa
Run BLAST on NCBI

transcript from alignment at sc0002412:3476..3566

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040390 ID=TCONS_00040390|Name=TCONS_00040390|organism=Clytia hemisphaerica|type=transcript|length=91bp|location=Sequence derived from alignment at sc0002412:3476..3566 (Clytia hemisphaerica)
ttCTACAGCCATTCTCAAAGAGATGAACAGGGGACACACAAAAGGTCCCT
TCACTATACctccttttaaaaatttccatctttCTCCTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024546XLOC_024546Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040390-exon-sc0002412-1491911889:3476..3566TCONS_00040390-exon-sc0002412-1491911889:3476..3566Clytia hemisphaericaexon
TCONS_00040390-exon-sc0002412-1510915933:3476..3566TCONS_00040390-exon-sc0002412-1510915933:3476..3566Clytia hemisphaericaexon
TCONS_00040390-exon-sc0002412-1575043694:3476..3566TCONS_00040390-exon-sc0002412-1575043694:3476..3566Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002412supercontigsc0002412:3476..3566 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040390 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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