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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040369 ID=TCONS_00040369|Name=TCONS_00040369|organism=Clytia hemisphaerica|type=transcript|length=1279bp
GTGGAGGAGGTCTCTAGGTCATCTCGAACCCAGCCTGGGCACGAAGAAGC
AGTCGTGCCCAGCACAGAAAGagaatttaaatttggcaaggATGAGGAAG
GAAAAATGGTGCAGCAAGTTACAATTAAAAACTGTAAGGACGCTGCCACC
GTTGTAGTAGCAGAAGGAAAATCTGAACAAAACACCACAAGAAAACCTAA
AAACGAAACCAAAAAGGAACAAACCAGAAAAAAGTGACACTTAAAAGTGT
AAGGGATAAAGAACATCACGAAGCCTTCACTAGAAGCTCGGAAAATGATA
TCGCTGTTATGTTATCAGGGGAAGACTCTCTCCATTGCGACACgcaagtt
ttcaaaaagatcaGAAAAACTGCGACTAAAGTAAACCTTGACTATCGAGA
ATACAATAACTTTTGTTAGCGCGTTAATTTTCATTGACGCCATCATTGCT
TTTCTGCAGTCACCACTTGAAATATAATCCACTTACGGTGAATCTCGTGC
TTAAATATCGGTTAAAAACTTGCGGACCTCTCTTTATATTGTAAGGTTAT
TATGAAACGTGGTATGCGGCGGGTAGAGAAAGTTGTGAACACAAGTAACC
GGTCacaatttctaaaatattgtTCACGTCTCCAAGGCTAACCGAATTAA
AGTTTATGTGACTGACACTGGGTTGGGTGAAATTGACGATAAAATTCTAA
CAATTGGCACAGGCAAAAACGGACTCAAACACAAAACTTACAAACTTAAA
CGTCGTCGTATTCATGAAACTTCCTGGAACGTTACTTTAATGAATGTCCC
AGGAATATATACTGGAGAGGAACCTGAGCTTATTAAATTCATGAAAACTT
TGGTATCTTGAGATCCCTCACTAGAAATCGAATTCAAACAGTCGACTGGT
CAGAAGAGTTTGGAGGGCCCAACATTATCGCCAGATACTCAATTAACTTG
AGAATCACTCCATCAAATTCTTTCGATCTAGATGGGAACCCTATTTCCCT
ACGGTTCTCAAACCCACAAGAATACATTTTTTGTGACAAAACAAGGCTAG
ACGTAATTCAATTCTTACAACATCTACACTCTCTGATACGTCCcgtccaa
aaaaaggcacctcAGTGGGGGCAGGGGAGACCAGCCCAAAAACCCAAGCT
GAGAAATCCCAACCCAattgttcaaaatttatgttaaaaatgaaattttt
tcaaaccttgttacacattatttttataagcaactccatttTCGGGTCAG
GCCTGGAGTTGCTAAGGGTTTTTCGAAAT Run BLAST on NCBI transcript from alignment at sc0002401:18928..20206 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040369 ID=TCONS_00040369|Name=TCONS_00040369|organism=Clytia hemisphaerica|type=transcript|length=1279bp|location=Sequence derived from alignment at sc0002401:18928..20206 (Clytia hemisphaerica)
ATTTCGAAAAACCCTTAGCAACTCCAGGCCTGACCCGAaaatggagttgc
ttataaaaataatgtgtaacaaggtttgaaaaaatttcatttttaacata
aattttgaacaatTGGGTTGGGATTTCTCAGCTTGGGTTTTTGGGCTGGT
CTCCCCTGCCCCCACTgaggtgcctttttttggacgGGACGTATCAGAGA
GTGTAGATGTTGTAAGAATTGAATTACGTCTAGCCTTGTTTTGTCACAAA
AAATGTATTCTTGTGGGTTTGAGAACCGTAGGGAAATAGGGTTCCCATCT
AGATCGAAAGAATTTGATGGAGTGATTCTCAAGTTAATTGAGTATCTGGC
GATAATGTTGGGCCCTCCAAACTCTTCTGACCAGTCGACTGTTTGAATTC
GATTTCTAGTGAGGGATCTCAAGATACCAAAGTTTTCATGAATTTAATAA
GCTCAGGTTCCTCTCCAGTATATATTCCTGGGACATTCATTAAAGTAACG
TTCCAGGAAGTTTCATGAATACGACGACGTTTAAGTTTGTAAGTTTTGTG
TTTGAGTCCGTTTTTGCCTGTGCCAATTGTTAGAATTTTATCGTCAATTT
CACCCAACCCAGTGTCAGTCACATAAACTTTAATTCGGTTAGCCTTGGAG
ACGTGAacaatattttagaaattgtGACCGGTTACTTGTGTTCACAACTT
TCTCTACCCGCCGCATACCACGTTTCATAATAACCTTACAATATAAAGAG
AGGTCCGCAAGTTTTTAACCGATATTTAAGCACGAGATTCACCGTAAGTG
GATTATATTTCAAGTGGTGACTGCAGAAAAGCAATGATGGCGTCAATGAA
AATTAACGCGCTAACAAAAGTTATTGTATTCTCGATAGTCAAGGTTTACT
TTAGTCGCAGTTTTTCtgatctttttgaaaacttgcGTGTCGCAATGGAG
AGAGTCTTCCCCTGATAACATAACAGCGATATCATTTTCCGAGCTTCTAG
TGAAGGCTTCGTGATGTTCTTTATCCCTTACACTTTTAAGTGTCACTTTT
TTCTGGTTTGTTCCTTTTTGGTTTCGTTTTTAGGTTTTCTTGTGGTGTTT
TGTTCAGATTTTCCTTCTGCTACTACAACGGTGGCAGCGTCCTTACAGTT
TTTAATTGTAACTTGCTGCACCATTTTTCCTTCCTCATccttgccaaatt
taaattctCTTTCTGTGCTGGGCACGACTGCTTCTTCGTGCCCAGGCTGG
GTTCGAGATGACCTAGAGACCTCCTCCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040369-exon-sc0002401-1491911889:18928..20206 | TCONS_00040369-exon-sc0002401-1491911889:18928..20206 | Clytia hemisphaerica | exon |
| TCONS_00040369-exon-sc0002401-1510915933:18928..20206 | TCONS_00040369-exon-sc0002401-1510915933:18928..20206 | Clytia hemisphaerica | exon |
| TCONS_00040369-exon-sc0002401-1575043694:18928..20206 | TCONS_00040369-exon-sc0002401-1575043694:18928..20206 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002401 | supercontig | sc0002401:18928..20206 . |
Blast
The following BLAST results are available for this feature:
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