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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040366 ID=TCONS_00040366|Name=TCONS_00040366|organism=Clytia hemisphaerica|type=transcript|length=1043bp
CTCACTGGAAAAGGAACCTTCCATGCTATGAGAATAATAAAGACTTTTAC
GAAAAAGCCCACCAAAGTAAAAGCCATTAGACAACTAAAGCATCGCAATC
AAAGCAATCTTTcagaaagtttgcaaaatattttatcttaaacttagaac
tgaacacaatttacatttttactggatcaatttttggaaagtgtctaggg
tcaaaagtcctgggaGCTAACAAAAAActcataaatctttggggggactt
aaaactcagggggggACGTAATTTTTGACtaggacctaaacccaggctga
cgctatgtagACTAGTCATAAATGCACAAATTGTGGTAAGAAACAATACA
AGGTCGTCATTTTTGTACTTTAAAGATGTAAATTTACCATGGATGTTATA
ATAACAAACAATGTATAGCTTTTGTCAATCCAGGTCCGCGGCTAGAGTTT
TGATTTGGTATTTTCCACTCAAAAATAAAGATCTGATGGCTCAAATCAAT
AATTCctcaatatttcaaattattcgtGAATTATTTACAGATTTTGCTAC
GACTTTAGCTTAGATTTCGCTTGaaatatttaacaattttgTGTCAGCTG
ATTTTGAAAAGCGAAGAAACCCACATAAGACCAAAACCACATTGTTATCG
ACGTCACGAAGCCTCGGTTACATTTTGTAAATACATTTTTTGCCATGACC
ATACCACGTTCATACACTACGGTTGTCTAAAGTTGTTCTATAGATCTATT
CGGTCTTTCCGACCAATGCGAtagctttttttttctaaacaattGCGGAC
CGAACATGTACAAATGTTATGTACAAATACATGGAATTTCAAAGCGATTA
CATTATTGTCTCCACAACTCATTACGTAGACTCTAACGTATCAGCTCTGT
GTTCTTCGCTTTATCCACTCTTTGATTATAACTATATAGGTTTTTATCat
tacttttttaaagaaaaccaAGCGTCATCGTAGAATGTGacacaatttta
atttatatttaGACAGCGAATTTAGGCAACACCTCGATCAATT Run BLAST on NCBI transcript from alignment at sc0002401:1785..2827 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040366 ID=TCONS_00040366|Name=TCONS_00040366|organism=Clytia hemisphaerica|type=transcript|length=1043bp|location=Sequence derived from alignment at sc0002401:1785..2827 (Clytia hemisphaerica)
AATTGATCGAGGTGTTGCCTAAATTCGCTGTCtaaatataaattaaaatt
gtgtCACATTCTACGATGACGCTtggttttctttaaaaaagtaatGATAA
AAACCTATATAGTTATAATCAAAGAGTGGATAAAGCGAAGAACACAGAGC
TGATACGTTAGAGTCTACGTAATGAGTTGTGGAGACAATAATGTAATCGC
TTTGAAATTCCATGTATTTGTACATAACATTTGTACATGTTCGGTCCGCa
attgtttagaaaaaaaaagctaTCGCATTGGTCGGAAAGACCGAATAGAT
CTATAGAACAACTTTAGACAACCGTAGTGTATGAACGTGGTATGGTCATG
GCAAAAAATGTATTTACAAAATGTAACCGAGGCTTCGTGACGTCGATAAC
AATGTGGTTTTGGTCTTATGTGGGTTTCTTCGCTTTTCAAAATCAGCTGA
CAcaaaattgttaaatatttCAAGCGAAATCTAAGCTAAAGTCGTAGCAA
AATCTGTAAATAATTCacgaataatttgaaatattgagGAATTATTGATT
TGAGCCATCAGATCTTTATTTTTGAGTGGAAAATACCAAATCAAAACTCT
AGCCGCGGACCTGGATTGACAAAAGCTATACATTGTTTGTTATTATAACA
TCCATGGTAAATTTACATCTTTAAAGTACAAAAATGACGACCTTGTATTG
TTTCTTACCACAATTTGTGCATTTATGACTAGTctacatagcgtcagcct
gggtttaggtcctaGTCAAAAATTACGTccccccctgagttttaagtccc
cccaaagatttatgagTTTTTTGTTAGCtcccaggacttttgaccctaga
cactttccaaaaattgatccagtaaaaatgtaaattgtgttcagttctaa
gtttaagataaaatattttgcaaactttctgAAAGATTGCTTTGATTGCG
ATGCTTTAGTTGTCTAATGGCTTTTACTTTGGTGGGCTTTTTCGTAAAAG
TCTTTATTATTCTCATAGCATGGAAGGTTCCTTTTCCAGTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040366-exon-sc0002401-1491911889:1785..2827 | TCONS_00040366-exon-sc0002401-1491911889:1785..2827 | Clytia hemisphaerica | exon |
| TCONS_00040366-exon-sc0002401-1510915933:1785..2827 | TCONS_00040366-exon-sc0002401-1510915933:1785..2827 | Clytia hemisphaerica | exon |
| TCONS_00040366-exon-sc0002401-1575043694:1785..2827 | TCONS_00040366-exon-sc0002401-1575043694:1785..2827 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002401 | supercontig | sc0002401:1785..2827 . |
Blast
The following BLAST results are available for this feature:
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