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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040352 ID=TCONS_00040352|Name=TCONS_00040352|organism=Clytia hemisphaerica|type=transcript|length=1051bp
acaaatttttctattgtctataggtgcgaaaaaaggactgggacggtttt
agtgggataaagcggacaaaaaaatgcccgcgcagcaattggcggctacg
gtcgaaaaggtgtatgaACACATAAACTCAAACCCAGTCCCCtacacacg
ttttttataagaacatataaaatatttgaagctttcgaatgttcttaact
ttttgagttcttaacattttcttattttcccatTCTATGAATTTTCTGTC
CATTTCCCTAaggaattgggtgttttaggcTCCTCAaagacttaaaatgt
tcttaactaacATTTCGGCCaacaaagccttatgttctcattaaaaaaac
attcatAAGCCATCTTCATGCGTTTGTCTCCATTCCCAGTCAATTCTGGA
CTAATATAATACGCATTTTTGCCTCGCTTATCCAATTTATCATCCCTTCT
GGCATCAATGTATCGATACCCACCTTGAAAAAGAATAAACCAGACTTTTA
ATATTTCCGTTGTAAATTATAGGAATCGAATCGAATCGAATCGAatcaaa
tcttcaaaaaattagaACTCAGTCGCTTTTGCTTTCGCTatcgtttttaa
gcaaaaagccACACGGTTTTGGCTCGACAACAACACGGTCAGAGCGTGAT
GTGCGTAGAAGATAAAATTTATTATGGGATCAGATGCAATTTCAACTGTA
ACATTCATTGTTGAATAAATATACATATTTGAGGTTCACGAACGGCTGCA
CCACGCCCGTTAGTAAAACAATCAATGTAGGAGCAAATTACTCTGGGTGC
TTATGGCACAACGCACCAAATCTAAAAAGAGTAACACACAATTGTACACt
cgctgatggaaactatttttATTTGCTTAGCAAAgtatgcaaacagagtg
gaaAGATTCTTTTGTCTATCGGTGGTTCCCAACCTTCCTATCATCCCTAT
CTTTAATGAAgagtgtcgaaattagaagagggatgtcgaaattagaccaA
CTTTGGTATTTTACTTGGATAACACAGCAATCTAGGGCTTTGAGATATTC
C Run BLAST on NCBI transcript from alignment at sc0002396:1131..2181 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040352 ID=TCONS_00040352|Name=TCONS_00040352|organism=Clytia hemisphaerica|type=transcript|length=1051bp|location=Sequence derived from alignment at sc0002396:1131..2181 (Clytia hemisphaerica)
GGAATATCTCAAAGCCCTAGATTGCTGTGTTATCCAAGTAAAATACCAAA
GTtggtctaatttcgacatccctcttctaatttcgacactcTTCATTAAA
GATAGGGATGATAGGAAGGTTGGGAACCACCGATAGACAAAAGAATCTtt
ccactctgtttgcatacTTTGCTAAGCAAATaaaaatagtttccatcagc
gaGTGTACAATTGTGTGTTACTCTTTTTAGATTTGGTGCGTTGTGCCATA
AGCACCCAGAGTAATTTGCTCCTACATTGATTGTTTTACTAACGGGCGTG
GTGCAGCCGTTCGTGAACCTCAAATATGTATATTTATTCAACAATGAATG
TTACAGTTGAAATTGCATCTGATCCCATAATAAATTTTATCTTCTACGCA
CATCACGCTCTGACCGTGTTGTTGTCGAGCCAAAACCGTGTggctttttg
cttaaaaacgatAGCGAAAGCAAAAGCGACTGAGTtctaattttttgaag
atttgatTCGATTCGATTCGATTCGATTCCTATAATTTACAACGGAAATA
TTAAAAGTCTGGTTTATTCTTTTTCAAGGTGGGTATCGATACATTGATGC
CAGAAGGGATGATAAATTGGATAAGCGAGGCAAAAATGCGTATTATATTA
GTCCAGAATTGACTGGGAATGGAGACAAACGCATGAAGATGGCTTatgaa
tgtttttttaatgagaacataaggctttgttGGCCGAAATgttagttaag
aacattttaagtcttTGAGGAgcctaaaacacccaattcctTAGGGAAAT
GGACAGAAAATTCATAGAatgggaaaataagaaaatgttaagaactcaaa
aagttaagaacattcgaaagcttcaaatattttatatgttcttataaaaa
acgtgtgtaGGGGACTGGGTTTGAGTTTATGTGTtcatacaccttttcga
ccgtagccgccaattgctgcgcgggcatttttttgtccgctttatcccac
taaaaccgtcccagtccttttttcgcacctatagacaatagaaaaatttg
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040352-exon-sc0002396-1491911889:1131..2181 | TCONS_00040352-exon-sc0002396-1491911889:1131..2181 | Clytia hemisphaerica | exon |
| TCONS_00040352-exon-sc0002396-1510915933:1131..2181 | TCONS_00040352-exon-sc0002396-1510915933:1131..2181 | Clytia hemisphaerica | exon |
| TCONS_00040352-exon-sc0002396-1575043694:1131..2181 | TCONS_00040352-exon-sc0002396-1575043694:1131..2181 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002396 | supercontig | sc0002396:1131..2181 . |
Blast
The following BLAST results are available for this feature:
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