TCONS_00040315 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040315
Unique NameTCONS_00040315
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040315 ID=TCONS_00040315|Name=TCONS_00040315|organism=Clytia hemisphaerica|type=transcript|length=171bp
caaTGAAAGTATAAAGTACTCTGAGAATTGTTGCAGGAGCACCATCTTTC
TTGCAAGAATTCATTGTGACTGTGGACTACCATTTTACGCTGGTTCTAAT
TGAGGGGggggtttcacttttacggtatgacggtattgggcctttttacc
cccggtaaatcggtattacga
Run BLAST on NCBI

transcript from alignment at sc0002386:21751..21921

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040315 ID=TCONS_00040315|Name=TCONS_00040315|organism=Clytia hemisphaerica|type=transcript|length=171bp|location=Sequence derived from alignment at sc0002386:21751..21921 (Clytia hemisphaerica)
tcgtaataccgatttaccgggggtaaaaaggcccaataccgtcataccgt
aaaagtgaaaccccCCCCTCAATTAGAACCAGCGTAAAATGGTAGTCCAC
AGTCACAATGAATTCTTGCAAGAAAGATGGTGCTCCTGCAACAATTCTCA
GAGTACTTTATACTTTCAttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024479XLOC_024479Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040315-exon-sc0002386-1491911889:21751..21921TCONS_00040315-exon-sc0002386-1491911889:21751..21921Clytia hemisphaericaexon
TCONS_00040315-exon-sc0002386-1510915933:21751..21921TCONS_00040315-exon-sc0002386-1510915933:21751..21921Clytia hemisphaericaexon
TCONS_00040315-exon-sc0002386-1575043694:21751..21921TCONS_00040315-exon-sc0002386-1575043694:21751..21921Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002386supercontigsc0002386:21751..21921 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040315 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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