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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040299 ID=TCONS_00040299|Name=TCONS_00040299|organism=Clytia hemisphaerica|type=transcript|length=3182bp
aagtcataaaaaatcaacctgaataaatgcaatcggaattccagagaact
tcataattccccaaacaacattacattactatgtcaaactcccattacat
aaattttacaattacgtcagagtagactacacTCGCCAccaaagaggttt
atttggaaaggGACTGGTATACAATCAGGTCCAGCTGCGAAGGGACCTTA
GTGTCAATGGGGTGTATGATATTCTCTTGGAACTTTTCAAGGATCATTTG
AATGATATTAATGAGCATCCAAAgttcCACATTCTTACTGGCATTGGCCA
GAATTTGGTCACACCAAGAACAACAGGACCATTGGATGCAGCAAATATCC
ATGCTGTATTTggccaaaaaattgtttggcTTATACCAGTAAAACGCCTA
CGTATATGTGAAGAATTTGATGAGTTGTGTCTTTCCGACGGTGAATACTC
TGGTGGCAGTGGAGTTGGTGGCAGTGGAGCTGGTGGTGGTAGCAGTGGAG
TTGGTCGTGGTGAATACTCTGGTGGCAGTGGAGCTGGTGGTGGTGAATAC
TCTGGTGGCAGTGGAGCTGGTGGTGGTGAATACTCTGGTGGCAGTGGAGC
TGGTCGTGGTGAATACTCTGGTGGCAGTGGAGCTGGTGGTGGTGAATACT
CTGGTGGTGGTGAATACTCTGGTGGCAGTGGAGCTGGTGGTGGTGAATAC
TCTGGTGATCGTGAACATTCTACTAAACCAACCACAGAGGAAATGTTCGA
CACGTTGTAAGACATGTTTCCTGCTCTTGATGCACTAAAAATCATGAGTA
CAATGAACAAACACAAAAACTTTGATGACACAGTAGATGCGCTTAATACC
TTTTCACTTGATCCATCTTCAGTCTCAACGGGTGCAGAAGTAATTACCAT
ATATACACAACAAGTAACGACCAAAGATGAGCTTCTCACAGTGAAAAGGG
AAAATCTCTGGAAGGACGCAATGAGGTTTTATAAGATTGCTTCTGCTCGT
AAGTCAATGCTATTCAACAAATTCCGTGTGGACTTTGATGGGGAAGTTGG
AGTTGATGCTGGCTCTCTTTCAATagagttttttacaaaattctttgaaC
AAGCACGTTCAGAACTGTTTGAAATGGTCCCAAGTGGCATTTATCTTATT
CCAAAGCGATCTGGTGGAAATTTGACATCATTTAAAATATTTGGGATGGC
TATGGCTCACAGTTTGATGCATGGTGGGCCACCATTTCCTTATCTCCACC
TGTGGTGCTATTTGATGCTTTTAGATAAAAGCGATGATGAAATTGCAGCT
TGTCTATTTGAAAGTTATGAAAACCTCATTCCTTTAAATGCTGGCTCATC
AACTGTTATCCAATTCTTAAATAAGTTATCTATTTGTAAATCGAATGATG
AAATCCAAGCAATATTAGATTCCGCAGAAGGACCTGCGTTTGAACAAATA
ATAAATTCGTCCCAATGGGACATAAATGTTGAAGTAAATATCAATAACAT
CGAAACATTGAAGTCGATCATTTTATGGGAGGAATTGGTCACAAAAAGAG
AAAAGCAAATCAAGGCTATGAGGGAAGGCATGGAGATCTTAGGATTTCTC
CCATTCTTACAAAATTACGAGTACCTCTTAAGAGAGTTTTTTGTCGGAAA
CACGAAAGAACTGACACCAGAAGTTTTATCACAAATCATACTTTGGGATG
ACGCAGAAAACCCAGATCACCCAGCATATCCGACGCTACATCAATGAAGC
CAATGTGGGTACTCTTACATCTCTCCTAAAGTTTATTACCAGTCATGCCA
TCATCACAAACTTAACAGATTTTAAGATTTCACTTAAACTTGCAGATAAC
AAATTCACACTTCTAGACGCAGATTCCTGTTTCCAGAGACTGATATTGCC
CGTAGTGCACGATTCGTACGAACAATTCAAAAAAGATGCCGATACTACAC
TGCGACATGGAAGTGAAGGCTATGGGAACATGTAATTTTACATTCCATTG
TATTGACTCAATCGTTAAATCAAAGTGTAGAGCCCTTTTGTTCATAAACA
CGTTTATATTTATAACTAGTTAACTTTGTATTCGTTGCTCGCGATACCAT
GGTTATCTTTTTCgaacataatttttttgaaaaaaggtattAAACTTTCa
gtcttcttttgtttttgcttttgtttttagAGGTTAAACAAATCACCTTT
CTATGGTACACACTCGGAAAAGGGTGCAAcctctttttttgtttatttta
aatttttatcttGAAGATTTCTgtagataaaaaaagaaaaccacAGTTTT
TATAAATAAGGCAAGGGACAAGGGGAGTGCATCAAGTTGATTTTGTTCAA
TCATAAACCAAAAATAGACTGAGAATTGTACTGTGGTTTTATTCATTTGT
TGCAAACCAAAGAACCGAACAACCCACTCCCATCAgggggggcaagcagt
tagtacagaaCACtatgtgtactaactgatttttggaaaaatctgtaCCC
CACCACCACCCCCTGTCACTTAGTACACCGTGTACTAACTGTCTTTGACC
TTGCTCAATATATATACCACCCCCCAAAATAAGGATCCGTCTCTCTACGG
TGCATTCCAGGTGAATTTCACACCCCAGGGAGGTTTTATGAGGtgtattt
ttacgtttttacctGTCTTTACCAGGTTTTTACCACTAACTActttcaaa
caaataaaaatataacaaattatGGAGTAGGTCAACCGCAGTGGGGGGAA
AAATTCTCGTTTTGAAAAcagttaatacaccttttttcttccaaaatttt
GTATACACCACCCCTTTCGGCAGTTAGTACACAGGTGTACTAACTGtatt
ttgcaaatttgaaaatgtaCACCACCCCTTTTAACAAATTATGGAGTAGG
TCAACCGCAGTGGGGGGAAAAATTCTcgttttgaaaacaattaatacacc
ttttttcgTCCAAAATTCTGTATACACCACCCCTTTTGGCAGTTAGTACA
CTGGTGTACTAActgcattttgaaaatttgaaaaatggacccaccacggt
actaagtgTCATGGGTGtcgtgtactaactgcttgccccccccCTGCTCC
CATGAACTGAATCAGACTTTTATTATATCAGTTTATAATTATATGTatat
agaaaaaagaaagatgtagttttatgtttatt Run BLAST on NCBI protein sequence of TCONS_00040299-protein >TCONS_00040299-protein ID=TCONS_00040299-protein|Name=TCONS_00040299-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MFPALDALKIMSTMNKHKNFDDTVDALNTFSLDPSSVSTGAEVITIYTQQ
VTTKDELLTVKRENLWKDAMRFYKIASARKSMLFNKFRVDFDGEVGVDAG
SLSIEFFTKFFEQARSELFEMVPSGIYLIPKRSGGNLTSFKIFGMAMAHS
LMHGGPPFPYLHLWCYLMLLDKSDDEIAACLFESYENLIPLNAGSSTVIQ
FLNKLSICKSNDEIQAILDSAEGPAFEQIINSSQWDINVEVNINNIETLK
SIILWEELVTKREKQIKAMREGMEILGFLPFLQNYEYLLREFFVGNTKEL
TPEVLSQIILWDDAENPDHPAYPTLHQ Run BLAST on NCBI transcript from alignment at sc0002383:1977..14302+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040299 ID=TCONS_00040299|Name=TCONS_00040299|organism=Clytia hemisphaerica|type=transcript|length=12326bp|location=Sequence derived from alignment at sc0002383:1977..14302+ (Clytia hemisphaerica)
aagtcataaaaaatcaacctgaataaatgcaatcggaattccagagaact
tcataattccccaaacaacattacattactatgtcaaactcccattacat
aaattttacaattacgtcagagtagactacacTCGCCAccaaagaggttt
atttggaaagggtaattacattttaatgttcgcttcttttttaaagattg
gccgggttggaaaagtatgaatttctttgtacatattttacctaccccaa
atatttaggaggctgagttttaaacgaattgtcaagttgaaacaaacgat
aaatgtatcaaatttggtctgttttatttaccccctggtgacttaacaaa
agagacttaactcgatgttacaatccaattattgaaagtttgtctcggcc
ttttcataatgagcgagacatacgttctctgattacgcaattttcatatt
gacattttcgaggcattttgatgtaactgctggAGCTGGTAGACATTCCG
AAGAATCAAGAAGAGTAGGGGGTAGAAGAAGCAGAAAAAATCGACAATCT
TCGGCTTCAACAAAGCCGCCTtatacagtcaggcacatcctggcaaatga
acggggtatttttcacttgcgaccattggcaaatgaacggggtatttttc
acttgcgaccattggcaaatgaacggggtcgaaaacgaaagtgacgtaat
agcgccgtatacccagtttaattgaaccgggttggaaatattttgcttca
tttcaaagaactgcatagatgaaattttttttccatgggtcaattttgtc
ttcgaagattgaagaaacttttaacgaaaaaataaagttcccggttttct
tccttttttccctttttcagtttgaagttcatttttattcattttNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtca
cgcttttagcctgagacgtcctatctcatttacactgggtgacgaatacc
ccatgcaaatgctcaccccgttcatttgccaggatgtgcctgactgttaT
AGGCTAAAGGAAGTGATTCTACTTCCATGTCGCCGCTCCAACATTGTTAG
GAGTCCTTTAAAGGCTCAATTAGTTCAAGCAggtaaaatttgctatatat
atcttttaccaatacccagacgatctcaatcgaacgcaatcgaatctcaa
tcgaacgtcaaaattctgggtaatattcgattgttgTTCCACTCGACTGg
tttgatcgtcgattccgcttgattgagatcgtctggctttattcttgcag
cttctcaacatccaagctctcaaaacatcacaagccgaatgaaaatactt
tcaatttcccgtagaaattatgcgatgaacaatccgggggggggggtcaa
tgAATCAATGATAGAATGCTTAAAGGACCCTGccaacgcaccggacttaa
cgaacaccggacacgcaaaagtccggtgtaaaatgagaatttttttacca
ccggacaatctctacaccggacttaaggaagttggatgtccggtgttgga
gaaggatatttttttccaccggacatgaccagtccggtacTATCAtcgac
ttattgcgtccggtgtaacgaaaagatactttttgccaccggacaaatac
accggacagtccagTGCGTTGGCAGGGTCCTATGcttaatcgaacgcaat
cgaacatcaatcgaacgcaatcgaatatcaattgaatctgaaaattacaG
TTATattcaattgagattcgattgcgtctgacaatcgaatttcaatcggt
cgattgcgttgaTTTGGTTcatgactggttcgatcgtcaattccgttcga
ttgagatcgtctggcaatACAATTTCACATTAAGAATCtgagttggttgg
ttggttggtcggtcaattaagaaaatttatttgtcAGAAAATTGAGAGGG
GGTTTATCTTAAAAAATCCTGCATAtactaataaaaatagacaatatgaa
tgacaaatttcattaaaaaacaccAATACACATTTCCTGTGTAATTCGCA
AAACAGATGTGCGCGCATTACCTATTTTGTTGCTCTCCTGGTGAACAAAT
CTGTTTCTGCCTGGgtttccttagggaaagttttttttttttttttaact
taacCAGACAgtactaatcgataaattcaattatcgaagtaatcgatgAT
GATTGAAATAATCGAACGACCACtttatcgattaacaatcgaatgtcgag
taccaaaattaaaaaaaaaattgtgagtattcaatcactttcttaacaac
cctttgAAGACTTGATAACCGttcgagtactttgattgttattaattact
ttcgataactttgaccagaggaatgtaaaaagatggaaaaacagcttctt
gaaaacaatggaaaaacggctcatcatataccaggtctcttgcccttaag
ggagtttatatcgagtaaataggtttcttttgttgttgctataaaaaatc
tgcataattagcgtgttgtgacaaaattcttttgtttcaagcctgattat
gcgcaaacttttagggcttatattttgaatacaaaatacctatacgaaaa
ggtacctatatcatctcgctcagaatttcctagtgATTCTACTggtataa
ccgcatcatgaccgcatcataatatggaaagctagagttcgagaaaatta
taacttcatcttgatttacttgacttctgacagttttacaagaaccaatt
taatatcattgcttTAAGAATTTCTATtactatacattggtaaaaatatt
gctccttatttttaaagattgaactagtaatcggcaaaaaaggaaaaaca
aattttcatttttatcgtcaaatcatgtagaaaccgtccaatttgtatgg
cgagctgtcttttctggactttcatttaatgacttAGGTCATtaaacgtt
tttacaatagaattttcaatagaagtgattgttgaactttgagtaatcag
aaaaactgtttttccatctctttacattcctctgctttgacaactttgat
aaccaataattttcataatgtataatgaaaatttgaaaaaattccatATA
TGTCAATAAAAGCTggagaaaattagaaaaaaaaattaatattattaata
atgtaaaaataataattaaacgtgtattttttaggaCTGAAGAATTTGAG
CTTTCCATTCTACTTGTGTCTTTTTTTGCAGCTTAATTTCAGGTGGCCGT
GAGCCAGCACACATCGcatgtcaaaacaaaaaattagaattgaaaaaata
ttagaTTTTTCTTCTCTTGCAAACACAACAACACGGTTAGGTGAAATAAA
CAATGGCGGCTTTGTTTTTATGAAAGCTATGGGTTCTCTTTTCGctgttt
ctcaatttttctgacAGTTAATAACATAATTCAATGCACATATGGGACCC
TGAGCCTGAGCTTTTATTTTAGCCAGTTTAGTTTTGTTGATTTCGTTCTC
TTTATGTATGTTGTTTGTACACAACATACACAACACTAATTTGATAACAC
CAATTTTGGACTAACACCAATAAGGCTAATGATTCACAAGATTTCagcct
aaaatttgcaaaatatgaatttttagcCAAAAACACTTGCAACTTCTAAG
AACATTGCAAAAGTCTGCAGAATGCTCCTTCAAGtacgatattcttataa
aaagtgtattAGGATGTATATGGATTCAATATTAGAGGATTGTCAAACAA
TAGAGAGCCATTTACCATTTAGTCAACAATTCATGTCAAACAAGTAGCAT
TTCCAAACTAGTGGGTATTTGATCATCTCACTTGTTTGACAGGTCATTTG
TGCAACACTGTTGATTTAACCTTTGGTTGGTTTACCCCACAAATGTTtgt
aaaatcacaaaaaagttcTATGAAATTACTTTATTTATTGTTTACACATA
ACTTGTGGTAAATTTTGGACTAGCGgttcgaagaaaaataaaaataaaat
tgacataTTTAGTTTATatatgtttagttttttctgatttttgtctGCAA
AGGTTCtctaaaagatggctgaagtaatttttctcagaTAATTTTTGTTT
GCCGTAAAGCAAGTTTTGATTATGAGGAATTAACCTCAGAGAAAGCACAA
TGTTTGCAAACTGTGCTTGTCTTGCAAAATCACTGAGACAGGTTTTAGAG
ATtcatagatgtttttttgctggGATGGATCTTCCAAGAAAAATGTTTGA
GTCAAGAGTCTATTGTTCCTTTCCATCTGTTGGGTCATGGAACAGGCCTC
AGAACCATATAAAAAAATAGACTCTATAATAATCAATTCTTACAATTATC
TTTATAGGACTGGTATACAATCAGGTCCAGCTGCGAAGGGACCTTAGTGT
CAATGGGGTGTATGATATTCTCTTGGAACTTTTCAAGGATCATTTGAATG
ATATTAATGAGCATCCAAAGTGagtaaatttgaaaacagtAATGGATGCA
AAATATGTAAAACATTTtcagttttgataaaaatgacaCACTTCCTATTT
ACATCAGAGCTCCGAATCTGCttctaggtcccccctgagttttaGGTCCC
CTcacttttcagtaaggttcaggtcccagcaaagaaaaataatttggcAC
CAAATTATTTcgattctcaacttcagttgagctagaatctgagaatgtct
gtgtgtgtgtctgtgtgtctgtgtgtctgtcaccaaaactttggggcagg
ctggagtcttcaaaaatggtccgattgggctgaattctcaacttcagttg
agctagaatctgagaatgtctgtgtgtgtgtgtgtctgtgtgtcggtcac
caaaactttggggcaggctggagtcttcaaaaatggtccgattgggctga
attctcaacttcagttgagctagaatctgagaatgtctgtgtgtgtgtgt
gtctgtgtgtcggtcaccaaaactttggggcaggctggagtcttcaaaaa
tggtccgattgggctgaattctcaacttcagttgagctagaatctgagaa
tgtctgtgtgtgtgtgtgtctgtgtgtcggtcaccaaaactttggggcag
gctggagtcttcaaaaatggtccgattgggctgaattctcaacttcagtt
gagctagaatctgagaatgtctgtgtgtgtgtgtgtctgtgtgtcggtca
ccaaaactttggggcaggctggagtcttcaaaaatggtccgattgggctg
aattctcaacttcagttgagctagaatctgagaatgtctgtgtgtgtgtg
tgtctgtgtgtcggtcaccaaaactttggggcaggctggagtcttcaaaa
atggtccgattgggctgaattctcaacttcagttgagctagaatctgaga
atgtctgtgtgtgtgtgtgtctgtgtgtcggtcaccaaaactttggggca
ggctggagtcttcaaaaatggtccgattgggctgaattctcaacttcagt
tgagctagaatctgagaatgtctgtgtgtgtgtgtgtctgtgtgtcggtc
accaaaactttggggcaggctggagtcttcaaaaatggtccgattgggct
gaattctcaacttcagttgagctagaatctgagaatgtctgtgtgtgtgt
gtgtctgtgtgtcggtcaccaaaactttggggcaggctggagtcttcaaa
aatggtccgattgggctgaaatgttgcacacttgatccttgggcaaatcc
ctggggctgtttttttcattttttcaaaattttaatttttggggcctggg
gacgagtttttcgccaaaacgaggctaaaacccaaaatgctataattttt
tttaagccattaagtttacaattgagcctacgaatgatttcaacgatact
gaagttgagccagtgcggttagcacgttcgacagttttaatatgttatat
atttttaaatattctttctttttgtgGTGTGTGCAGGTGTGTGTACCACT
ATATGTCCATAGTACCACCCCTCTCAAGtgcagataaaaataaaaaagta
gaatatttaaaaacagaacattaaaaccaaccaaaaaaatatttttataa
tttcttaatttaggggaactcaacaaatttgtcattttcatttttttcct
gatttttggtaatattaagtataaaaatgacaaaaagtatTTAATTCTGA
TCTCTCgaataaaaatcatgaaaaatctctcttaacttcagttaaaaatg
tgttaaaaaatcacccccttttttaaaaaaaaagattgtcTTCTCTTTGG
ATTTATGACGTCACAGTATTCAGAAAATAGAACAAATTCAGTTATGACTG
CAGTATGTTATCAGAGTtctgttttaaataagaaataaatacatAGAAAA
GGATTCCTGGTAAATTGTGGGTGATTTAGCTGAATAACAATAAACAATCC
AACaagaaacacaaaaatttaGTCACAAACCCTCTACTGAAAGGCATGTC
TTCACTGATTTCTAGCCTGAGAAGATAAGCATCTTCGGCTTTCTGAATAC
AGATACACGTCATAAAACAGCtgaaagtcttttttatttgataaataatt
tcatttttgtaGAGGGGAGCCTCTTTTTAAAAGCtcattaaacaaatttt
tagagtgaaAGGAGAGTTGCAAccttgaaatcttgaaaattatcATTAAA
ACAAACCATCAAACCATCAAGatagaaacgaaaaaatccaaaatttgttg
agttcccctttaatTATTGTGATTAGCCCCCAGAACTTTAGTGCAGCCCT
tcaggtccccccactttttaagGCCCCCTCTGAGTTTAGAAAATGAGACA
GCTCTCACCCACTTTTAGGCCGATTTTAAATTTacacccccccccaaaaa
aaaataagtgggggggggcAGAGCCATGCATTTAGAGAAGTGAGGGGCTT
GATTATATATAACccttttttaaagcattttgtCTATTTGGGTTGACTAG
AGTTTAGTGACAATACAAGGggatgatttttaatttttaactttatagat
tatttttttatttttgttctgtTCAGCCCATtcctaaaaatgttttgaat
tgagAAATTACTTAAAAGTGTAAAATTAAACCTTGATCATACACGTTTTT
GTAAGaaacaactttataagaaactgGAGGCTGAAAATAAGGAAATATTA
AGGAATTAACCAtaagatttcaaattaaaaaaaaaaacagaaagaaattt
tcttttttgaatcaATAAAACTAGCGAAATACTAAAAACACAAGAACATC
TTTTAAAATGGttgcaaaacaaaaattagaagtaaaaataaggaaaataa
gGAACAAATTAAGGAGCTGTGAGCCTCAGGCTTTTTTAGAAGATAAGGGA
CTTCAGTCTCAACCCCATCAGACTAAGgttctttttaaaataaacaaTGG
GTAGTCCAGAAATTTCATCCCATCTCtagttttattttctttttttcaaa
ttgaaaaaaattcagcaTATCAggaaaggcaaaaaaaatttcttcaattt
aACATAAAGAAAGTTTTATGTATTCTGTAGGTTAGAAATTCAGAAAATAA
TATGTTTTAAGAAAGATGCTGAATTTTTCCCTTTTCTATTTTTGGATCAT
TAGATTCGCccctttttgtaaatttgtggaCTTTTGGAACAGGCTTGAGG
CTTTAAAAAAGTACCAGGGTAATTTGgtgataatttttgatttttttaaa
ggttcCACATTCTTACTGGCATTGGCCAGAATTTGGTCACACCAAGAACA
ACAGGACCATTGGATGCAGCAAATATCCATGCTGTATTTggccaaaaaat
tgtttggcTTATACCAGTAAAACGCCTAGTAAGTTATTTTGGACTAATAA
AACTACAGAGAATTATTTGCCAACAAAGATGCATTTTTTTCACTGGATGC
GCTAAATCCACCTAAAAACATAGTGCAGAGGGTTTTCTACCCATGCCCTG
AGAGTCTCCCctattgattttcaaaaaaatgttttgataaaaagaCATCC
AAATCATGTCAATGTCCAAGgacaaaaatgttaattttgacaagaagaaa
aaaggtcctataaattaaccaatGCTTTTTTTGGGAtcagctcattagtt
ttttctgattttttacacaatgatgcaaaatggcaacaCCCAAAATGTGG
TAGATCctgattttaaaggaaaaaatttgaggcaaatttgggccaatacT
GTACGTGCCTAaaaagtttttctgactttgTCCAAAGTTCTGTCAtcact
tttttctgatttttggcagaaagatggtGAAGTGGTTTTCCCTGGAACAT
TTTTGTTTGTCGGAAATTCCCTCCAACCATTTACATTTAAGGAATAatca
gatgaaaaatgaaatttgaccCACAGCTAGTCCTGAGTAAAACCTTCAAA
TTTTTGCACGGACAAACTTTCCAAaactaaaatatttcaatttgaaatct
GAGAATTTTGAACGTTACATGGTATTGTTTTTcagcaaaacttcaaaatt
tcaaagtggcatATCTCAGCCATTGAACTTTTGTTTgcgaaaagattttt
ttgaggtTTGAGTCAGGGGAAGCTGTATATTCAtttttcaactgatttaa
gCTTTCTCAGGATCGGCTGATTATTCTTttatgatttttggcacaatgat
gcagaATAACAATGTCCAATATGTGAATGATCCAAAAGATTTTGGGGCAA
ATTCCGGCaaatgcctaaaaatagggtttctGGACTaagtgcaaaattgc
ttcatttgttttttctgatttttggcagaaagaaagATGACAAGATTCTC
TGACAGAATGCTGAAGTAATTTTCCCaggaaaatttttgttcataaaata
caacttttcgtATTTTGGGAAATTCACCTTTACCACTTCACAATTTTCAT
TAGataagctttatttttccagtcTGAATTGTTGTacaattattgaaatt
tttttcctttttcatctgATGTTGAATCCATTTAAGTAACTATGTTGCTT
GTTGAAAATGCTCCAAACCCCACACAAACCGGCCTTCATCGGCACCAATG
ACATGGCTTTTTCTtaattaaaagaatttttcagattttaatatTGAATT
TGACCAACACAATAGTTTATACTTGAccaaaagctttttttaagaaagtt
aAGTATTGGGAGGGACCCACCATGGTTCGACaggaaaatttttagatttt
acccTCAGATtgtctttttttaaagtaaaggAACAATCTTGTATTTGAAA
AACAATGTTATgcttctttgaaaaatcttaatcAACCCCACCCTTATTCC
CAACATTTTCCCTTTTTATCCATAAATCTGACCCCTCccctatttttctc
ttttttggaaGTTTAAATCCCCCTTTatggaggggggggggctcgCACTA
TGAAGCTGCCAAACTACATAAtactttcaaatatattttcatagCGTATA
TGTGAAGAATTTGATGAGTTGTGTCTTTCCGACGGTGAATACTCTGGTGG
CAGTGGAGTTGGTGGCAGTGGAGCTGGTGGTGGTAGCAGTGGAGTTGGTC
GTGGTGAATACTCTGGTGGCAGTGGAGCTGGTGGTGGTGAATACTCTGGT
GGCAGTGGAGCTGGTGGTGGTGAATACTCTGGTGGCAGTGGAGCTGGTCG
TGGTGAATACTCTGGTGGCAGTGGAGCTGGTGGTGGTGAATACTCTGGTG
GTGGTGAATACTCTGGTGGCAGTGGAGCTGGTGGTGGTGAATACTCTGGT
GATCGTGAACATTCTACTAAACCAACCACAGAGGAAATGTTCGACACGTT
GTAAGACATGTTTCCTGCTCTTGATGCACTAAAAATCATGAGTACAATGA
ACAAACACAAAAACTTTGATGACACAGTAGATGCGCTTAATACCTTTTCA
CTTGATCCATCTTCAGTCTCAACGGGTGCAGAAGTAATTACCATATATAC
ACAACAAGTAACGACCAAAGATGAGCTTCTCACAGTGAAAAGGGAAAATC
TCTGGAAGGACGCAATGAGGTTTTATAAGATTGCTTCTGCTCGTAAGTCA
ATGCTATTCAACAAATTCCGTGTGGACTTTGATGGGGAAGTTGGAGTTGA
TGCTGGCTCTCTTTCAATagagttttttacaaaattctttgaaCAAGCAC
GTTCAGAACTGTTTGAAATGGTCCCAAGTGGCATTTATCTTATTCCAAAG
CGATCTGGTGGAAATTTGACATCATTTAAAATATTTGGGATGGCTATGGC
TCACAGTTTGATGCATGGTGGGCCACCATTTCCTTATCTCCACCTGTGGT
GCTATTTGATGCTTTTAGATAAAAGCGATGATGAAATTGCAGCTTGTCTA
TTTGAAAGTTATGAAAACCTCATTCCTTTAAATGCTGGCTCATCAACTGT
TATCCAATTCTTAAATAAGTTATCTATTTGTAAATCGAATGATGAAATCC
AAGCAATATTAGATTCCGCAGAAGGACCTGCGTTTGAACAAATAATAAAT
TCGTCCCAATGGGACATAAATGTTGAAGTAAATATCAATAACATCGAAAC
ATTGAAGTCGATCATTTTATGGGAGGAATTGGTCACAAAAAGAGAAAAGC
AAATCAAGGCTATGAGGGAAGGCATGGAGATCTTAGGATTTCTCCCATTC
TTACAAAATTACGAGTACCTCTTAAGAGAGTTTTTTGTCGGAAACACGAA
AGAACTGACACCAGAAGTTTTATCACAAATCATACTTTGGGATGACGCAG
AAAACCCAGATCACCCAGCATATCCGACGCTACATCAATGAAGCCAATGT
GGGTACTCTTACATCTCTCCTAAAGTTTATTACCAGTCATGCCATCATCA
CAAACTTAACAGATTTTAAGATTTCACTTAAACTTGCAGATAACAAATTC
ACACTTCTAGACGCAGATTCCTGTTTCCAGAGACTGATATTGCCCGTAGT
GCACGATTCGTACGAACAATTCAAAAAAGATGCCGATACTACACTGCGAC
ATGGAAGTGAAGGCTATGGGAACATGTAATTTTACATTCCATTGTATTGA
CTCAATCGTTAAATCAAAGTGTAGAGCCCTTTTGTTCATAAACACGTTTA
TATTTATAACTAGTTAACTTTGTATTCGTTGCTCGCGATACCATGGTTAT
CTTTTTCgaacataatttttttgaaaaaaggtattAAACTTTCagtcttc
ttttgtttttgcttttgtttttagAGGTTAAACAAATCACCTTTCTATGG
TACACACTCGGAAAAGGGTGCAAcctctttttttgtttattttaaatttt
tatcttGAAGATTTCTgtagataaaaaaagaaaaccacAGTTTTTATAAA
TAAGGCAAGGGACAAGGGGAGTGCATCAAGTTGATTTTGTTCAATCATAA
ACCAAAAATAGACTGAGAATTGTACTGTGGTTTTATTCATTTGTTGCAAA
CCAAAGAACCGAACAACCCACTCCCATCAgggggggcaagcagttagtac
agaaCACtatgtgtactaactgatttttggaaaaatctgtaCCCCACCAC
CACCCCCTGTCACTTAGTACACCGTGTACTAACTGTCTTTGACCTTGCTC
AATATATATACCACCCCCCAAAATAAGGATCCGTCTCTCTACGGTGCATT
CCAGGTGAATTTCACACCCCAGGGAGGTTTTATGAGGtgtatttttacgt
ttttacctGTCTTTACCAGGTTTTTACCACTAACTActttcaaacaaata
aaaatataacaaattatGGAGTAGGTCAACCGCAGTGGGGGGAAAAATTC
TCGTTTTGAAAAcagttaatacaccttttttcttccaaaattttGTATAC
ACCACCCCTTTCGGCAGTTAGTACACAGGTGTACTAACTGtattttgcaa
atttgaaaatgtaCACCACCCCTTTTAACAAATTATGGAGTAGGTCAACC
GCAGTGGGGGGAAAAATTCTcgttttgaaaacaattaatacacctttttt
cgTCCAAAATTCTGTATACACCACCCCTTTTGGCAGTTAGTACACTGGTG
TACTAActgcattttgaaaatttgaaaaatggacccaccacggtactaag
tgTCATGGGTGtcgtgtactaactgcttgccccccccCTGCTCCCATGAA
CTGAATCAGACTTTTATTATATCAGTTTATAATTATATGTatatagaaaa
aagaaagatgtagttttatgtttatt Coding sequence (CDS) from alignment at sc0002383:1977..14302+ >TCONS_00040299 ID=TCONS_00040299|Name=TCONS_00040299|organism=Clytia hemisphaerica|type=CDS|length=984bp|location=Sequence derived from alignment at sc0002383:1977..14302+ (Clytia hemisphaerica)
ATGTTTCCTGCTCTTGATGCACTAAAAATCATGAGTACAATGAACAAACA
CAAAAACTTTGATGACACAGTAGATGCGCTTAATACCTTTTCACTTGATC
CATCTTCAGTCTCAACGGGTGCAGAAGTAATTACCATATATACACAACAA
GTAACGACCAAAGATGAGCTTCTCACAGTGAAAAGGGAAAATCTCTGGAA
GGACGCAATGAGGTTTTATAAGATTGCTTCTGCTCGTAAGTCAATGCTAT
TCAACAAATTCCGTGTGGACTTTGATGGGGAAGTTGGAGTTGATGCTGGC
TCTCTTTCAATagagttttttacaaaattctttgaaCAAGCACGTTCAGA
ACTGTTTGAAATGGTCCCAAGTGGCATTTATCTTATTCCAAAGCGATCTG
GTGGAAATTTGACATCATTTAAAATATTTGGGATGGCTATGGCTCACAGT
TTGATGCATGGTGGGCCACCATTTCCTTATCTCCACCTGTGGTGCTATTT
GATGCTTTTAGATAAAAGCGATGATGAAATTGCAGCTTGTCTATTTGAAA
GTTATGAAAACCTCATTCCTTTAAATGCTGGCTCATCAACTGTTATCCAA
TTCTTAAATAAGTTATCTATTTGTAAATCGAATGATGAAATCCAAGCAAT
ATTAGATTCCGCAGAAGGACCTGCGTTTGAACAAATAATAAATTCGTCCC
AATGGGACATAAATGTTGAAGTAAATATCAATAACATCGAAACATTGAAG
TCGATCATTTTATGGGAGGAATTGGTCACAAAAAGAGAAAAGCAAATCAA
GGCTATGAGGGAAGGCATGGAGATCTTAGGATTTCTCCCATTCTTACAAA
ATTACGAGTACCTCTTAAGAGAGTTTTTTGTCGGAAACACGAAAGAACTG
ACACCAGAAGTTTTATCACAAATCATACTTTGGGATGACGCAGAAAACCC
AGATCACCCAGCATATCCGACGCTACATCAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040299-exon-sc0002383-1491911889:1977..2137 | TCONS_00040299-exon-sc0002383-1491911889:1977..2137 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1510915933:1977..2137 | TCONS_00040299-exon-sc0002383-1510915933:1977..2137 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1575043694:1977..2137 | TCONS_00040299-exon-sc0002383-1575043694:1977..2137 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1491911889:6384..6495 | TCONS_00040299-exon-sc0002383-1491911889:6384..6495 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1510915933:6384..6495 | TCONS_00040299-exon-sc0002383-1510915933:6384..6495 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1575043694:6384..6495 | TCONS_00040299-exon-sc0002383-1575043694:6384..6495 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1491911889:9778..9904 | TCONS_00040299-exon-sc0002383-1491911889:9778..9904 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1510915933:9778..9904 | TCONS_00040299-exon-sc0002383-1510915933:9778..9904 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1575043694:9778..9904 | TCONS_00040299-exon-sc0002383-1575043694:9778..9904 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1491911889:11521..14302 | TCONS_00040299-exon-sc0002383-1491911889:11521..14302 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1510915933:11521..14302 | TCONS_00040299-exon-sc0002383-1510915933:11521..14302 | Clytia hemisphaerica | exon |
| TCONS_00040299-exon-sc0002383-1575043694:11521..14302 | TCONS_00040299-exon-sc0002383-1575043694:11521..14302 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002383 | supercontig | sc0002383:1977..14302 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000569 | HECT_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004842 | ubiquitin-protein transferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0004842 |
ubiquitin-protein transferase activity |
Blast
The following BLAST results are available for this feature:
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