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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040297 ID=TCONS_00040297|Name=TCONS_00040297|organism=Clytia hemisphaerica|type=transcript|length=1262bp
CTGGCATACTGTAGATAGGGGTAATAAGAATAATTGATattgaaatgatt
gaaattGCACATCacgattaaaaaatttttcattcccTTCTCAGGAAATA
AACGTGCCGTAGAAGATGCTTTCCGCTGGTTACGCCATGGCGCCACTTTC
GTTTTATTCGGCGTTTGTGGGAAAGGTGTCAACGTGAGTTTCGAAGGGTA
CAGTATCTACCAAAAAGAATTACGAATCGTCAGCTCGTTTCTAAACCGCT
TCTCGTACGCGCGGACTgtaaatctcgtacaccataTGTCAGATAGGTAT
TTAGACTTTAAACATTTGGAGGTCGCCTCTTACAGCTTACATGACTATGA
GGCCGCCCTTGACGCCCTACGGAAAGGTGTGATTTCAAAAGCTGTCTTTG
AGTTTTAAGCACATGCAATCTGGTTATATTTATCATCATTATCATCATAT
AACGCCCTTGACGCCCTATGGAGGGGCGGGATTTCCAAAGCTGTCTTTGA
GTTTTAAGTACATGCAAGCTGGTTATATTTatcatcattatcatcattTA
CCGCCCTTGACGCCCTATGGATAGGCGTAATTTCCAAAGCTGTCTTTGAG
TTTTAAGTATATGCAAGCTGCTTATATTTATCGTCATTATCATCATATAC
CGCCCTTAACGCCCTATGGATAGGCGGGATTGCAACAGCTGTTTTTGAGT
TTCCAATGGATGTAAGCTAATGGTGGTTTATGATTTTGGTGGTGAAGCCA
TCCGTAGGGCTTTTAATTAGTTTTTCCACGAGAGCTTTGTAGATAAAAGA
TACATTTGACATTCGGctacgaaatgaagccattctattggttaaattca
gCTCTTACGTCACATCTAACCAataaaatggcttcatttcgttttggCGA
AACGGAATCGTTTCGTGCGAAATTTTGTTCTTCGcttcattaaaaaatat
catACCTATCTTTTGTGTCGTAAAAGTAAACGATTGGGGAGATTAGTAGA
ATTCGCCCTAGCTTTCAACCCACGTGTTCGGTAGAGGCACAGTGGAATTT
CCTCGGTCTCGGTTGTGAATTTTTCTTCATCCATATTAGAGATTATTTTA
CATTATTTAACAAATTTTCATTCACTTTTTGTAAAAATTACAATTTTTTT
TTTGGATTCATTTTTTTAATTTAGTAGATTGCAATTAGTAGTTATGGAGA
GAAATAATGTTTATACTTTGTAGATGAAATGGAAGTAAAGATTTATtgtt
actttaaaaaat Run BLAST on NCBI transcript from alignment at sc0002381:15312..16573 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040297 ID=TCONS_00040297|Name=TCONS_00040297|organism=Clytia hemisphaerica|type=transcript|length=1262bp|location=Sequence derived from alignment at sc0002381:15312..16573 (Clytia hemisphaerica)
attttttaaagtaacaATAAATCTTTACTTCCATTTCATCTACAAAGTAT
AAACATTATTTCTCTCCATAACTACTAATTGCAATCTACTAAATTAAAAA
AATGAATCCAAAAAAAAAATTGTAATTTTTACAAAAAGTGAATGAAAATT
TGTTAAATAATGTAAAATAATCTCTAATATGGATGAAGAAAAATTCACAA
CCGAGACCGAGGAAATTCCACTGTGCCTCTACCGAACACGTGGGTTGAAA
GCTAGGGCGAATTCTACTAATCTCCCCAATCGTTTACTTTTACGACACAA
AAGATAGGTatgatattttttaatgaagCGAAGAACAAAATTTCGCACGA
AACGATTCCGTTTCGccaaaacgaaatgaagccattttatTGGTTAGATG
TGACGTAAGAGctgaatttaaccaatagaatggcttcatttcgtagCCGA
ATGTCAAATGTATCTTTTATCTACAAAGCTCTCGTGGAAAAACTAATTAA
AAGCCCTACGGATGGCTTCACCACCAAAATCATAAACCACCATTAGCTTA
CATCCATTGGAAACTCAAAAACAGCTGTTGCAATCCCGCCTATCCATAGG
GCGTTAAGGGCGGTATATGATGATAATGACGATAAATATAAGCAGCTTGC
ATATACTTAAAACTCAAAGACAGCTTTGGAAATTACGCCTATCCATAGGG
CGTCAAGGGCGGTAaatgatgataatgatgatAAATATAACCAGCTTGCA
TGTACTTAAAACTCAAAGACAGCTTTGGAAATCCCGCCCCTCCATAGGGC
GTCAAGGGCGTTATATGATGATAATGATGATAAATATAACCAGATTGCAT
GTGCTTAAAACTCAAAGACAGCTTTTGAAATCACACCTTTCCGTAGGGCG
TCAAGGGCGGCCTCATAGTCATGTAAGCTGTAAGAGGCGACCTCCAAATG
TTTAAAGTCTAAATACCTATCTGACAtatggtgtacgagatttacAGTCC
GCGCGTACGAGAAGCGGTTTAGAAACGAGCTGACGATTCGTAATTCTTTT
TGGTAGATACTGTACCCTTCGAAACTCACGTTGACACCTTTCCCACAAAC
GCCGAATAAAACGAAAGTGGCGCCATGGCGTAACCAGCGGAAAGCATCTT
CTACGGCACGTTTATTTCCTGAGAAgggaatgaaaaattttttaatcgtG
ATGTGCaatttcaatcatttcaatATCAATTATTCTTATTACCCCTATCT
ACAGTATGCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040297-exon-sc0002381-1491911889:15312..16573 | TCONS_00040297-exon-sc0002381-1491911889:15312..16573 | Clytia hemisphaerica | exon |
| TCONS_00040297-exon-sc0002381-1510915933:15312..16573 | TCONS_00040297-exon-sc0002381-1510915933:15312..16573 | Clytia hemisphaerica | exon |
| TCONS_00040297-exon-sc0002381-1575043694:15312..16573 | TCONS_00040297-exon-sc0002381-1575043694:15312..16573 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002381 | supercontig | sc0002381:15312..16573 . |
Blast
The following BLAST results are available for this feature:
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