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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040285 ID=TCONS_00040285|Name=TCONS_00040285|organism=Clytia hemisphaerica|type=transcript|length=547bp
ttttatgaaaatggaTGGGAGTCGCAAAAGAATatcaaattgaaacaaat
tcTAAACTTATACTACAGTTTCAGAGACTTAGCAAGGGATATTCGTTGCA
CTCATGTTGACCAACCTCGAATTGATTCATTTGgcaaaagaaaattgttt
cCAGAAATTTTTGATCTATTCCAATACCGACGTATTGCATGGTATGCCAT
ACCTACACTATTTGCGCAACCATCTTAGTACTTTGATGAAATTGTTTGCT
GACTTATTTGGTTTTGGCTACGGTGTGTTTTCTACCTGTGCTGGTGAGCA
TCTTAATAAACGCATCAAATGTTGTGAATTGCATGACACTAACCTGGATG
AGAAGAGATTTTACACCATCATTCATTTAATGCGTGTGAAGCAACTTCAA
TtcacaaaaaagtattttacCTTCTGGAAAAAACATTGTATGTTCAGCTT
GTGGTGAAACTGGAcataacaagaaaaataaaagctGCCCAATGCATGAA
AGCCACCCTAATTTGCAATTCCAATTTAGTGACAATGAAGGAGATTG Run BLAST on NCBI transcript from alignment at sc0002376:12043..12960+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040285 ID=TCONS_00040285|Name=TCONS_00040285|organism=Clytia hemisphaerica|type=transcript|length=918bp|location=Sequence derived from alignment at sc0002376:12043..12960+ (Clytia hemisphaerica)
ttttatgaaaatggaTGGGAGTCGCAAAAGAATatcaaattgaaacaaat
tcTAAACTTATACTACAGTTTCAGAGACTTAGCAAGGTATGAATTGTTTA
TGACTCCGGAAGGTTACCAATGTTTTTCAATCTGTGTAAATAAGCCTGAA
ATGTCATATGCTGTGACTTATTTATAACTCTGGGGTTGACAGTTCATTCT
CCCCATTGTGCTATTCAATTGTATATATAATAAGCAAGAAATCTTacaac
aaatgaaaatattttctagtAACTTTTACAGGGGTATGGACAAAATATAC
AGAATCACTAGGGGGATTCAGACACAGGGTActgacccatagccgggtgg
tggtgtctatttttgtatttaaaaaaagttagtaccctgGTACTACTTTA
GGGGTCGGGGTGGGTATTTTTCACTAGTATTATATACTTGCTTTATTTTA
ATTTCAGGGATATTCGTTGCACTCATGTTGACCAACCTCGAATTGATTCA
TTTGgcaaaagaaaattgtttcCAGAAATTTTTGATCTATTCCAATACCG
ACGTATTGCATGGTATGCCATACCTACACTATTTGCGCAACCATCTTAGT
ACTTTGATGAAATTGTTTGCTGACTTATTTGGTTTTGGCTACGGTGTGTT
TTCTACCTGTGCTGGTGAGCATCTTAATAAACGCATCAAATGTTGTGAAT
TGCATGACACTAACCTGGATGAGAAGAGATTTTACACCATCATTCATTTA
ATGCGTGTGAAGCAACTTCAATtcacaaaaaagtattttacCTTCTGGAA
AAAACATTGTATGTTCAGCTTGTGGTGAAACTGGAcataacaagaaaaat
aaaagctGCCCAATGCATGAAAGCCACCCTAATTTGCAATTCCAATTTAG
TGACAATGAAGGAGATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040285-exon-sc0002376-1491911889:12043..12128 | TCONS_00040285-exon-sc0002376-1491911889:12043..12128 | Clytia hemisphaerica | exon |
| TCONS_00040285-exon-sc0002376-1510915933:12043..12128 | TCONS_00040285-exon-sc0002376-1510915933:12043..12128 | Clytia hemisphaerica | exon |
| TCONS_00040285-exon-sc0002376-1575043694:12043..12128 | TCONS_00040285-exon-sc0002376-1575043694:12043..12128 | Clytia hemisphaerica | exon |
| TCONS_00040285-exon-sc0002376-1491911889:12500..12960 | TCONS_00040285-exon-sc0002376-1491911889:12500..12960 | Clytia hemisphaerica | exon |
| TCONS_00040285-exon-sc0002376-1510915933:12500..12960 | TCONS_00040285-exon-sc0002376-1510915933:12500..12960 | Clytia hemisphaerica | exon |
| TCONS_00040285-exon-sc0002376-1575043694:12500..12960 | TCONS_00040285-exon-sc0002376-1575043694:12500..12960 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002376 | supercontig | sc0002376:12043..12960 + |
Blast
The following BLAST results are available for this feature:
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