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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040256 ID=TCONS_00040256|Name=TCONS_00040256|organism=Clytia hemisphaerica|type=transcript|length=1042bp
aaatttataaagattgaagaattccttcgaaagttataggtaaaagaaaa
aagagtgcacatttatcgtgaacagactttagtatatacaagttgttttt
tttataaggaaccttaacttggctccgagcctggagttccttattttgcc
agagagtttcagcttcaaagttccttatcaagTTCCTTAGTTACTTaact
gctaagtttggatttgCTAAGTGTGTAGCTTCTTTATCAGCATTTTTTGT
CTTTATGACATATTGAAAGGTGTTTGAGCAATATTTTCCGTCTTTTATTT
AGGTTGTTGTTAATGTGTGCAAGTTCAAATTGAACTCTCGCTGTTtctta
acttgattttttattctcagcctgagcaattccttaacaattccttattt
ctcagaccattttcagcctcaagttccttataaacgtgttccttattaaa
aaataaaacgtgtagTAGCATATAATTATATCATAGTATATTACAGCCCT
TTGTATTCTTTTAAGTTATGACCGCAGCCGCATAAGGTCTGTAGGTAAAG
ATAGTATATTTCATGAAATGGTCCACCAAACCggatcaaaataaaagaag
atagaaaataagaaaaagggaTCAGGTCCAGTTGGACTGGTCGCTGGttg
gattcttgaccagtttTTGAAACTGGTCAAGAATGTACCCGGCCGGGACT
CATTTTACTGACCCGATTTcgtaaaatcttacaaaaaatcTGGTCAAGAA
CCCACCCCTCAGCTGGTCAAGAATCTAACTTTCTGGTCAAGAATTTACCC
GTGATCTGGTCAAGGACCTACCCCTCAACTGGTCAAaaatccacccgacc
tggttaAGGACCTGCCCCCAAACCGGttcaagaatccacccgacctggtc
aaggaCCTGCCCCCAAGCTGGTCAACAATCCCAAGAATCTACCCCCAACT
GGTCAACAATCCAGCCGACCTGGTCAAGGACCTGTCCCCAAACTGGTCAA
CAATCCGCCCAACCTGGTCAAGAATCTACCCCCTAACTAGCC Run BLAST on NCBI transcript from alignment at sc0002366:8004..9045 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040256 ID=TCONS_00040256|Name=TCONS_00040256|organism=Clytia hemisphaerica|type=transcript|length=1042bp|location=Sequence derived from alignment at sc0002366:8004..9045 (Clytia hemisphaerica)
GGCTAGTTAGGGGGTAGATTCTTGACCAGGTTGGGCGGATTGTTGACCAG
TTTGGGGACAGGTCCTTGACCAGGTCGGCTGGATTGTTGACCAGTTGGGG
GTAGATTCTTGGGATTGTTGACCAGCTTGGGGGCAGGtccttgaccaggt
cgggtggattcttgaaCCGGTTTGGGGGCAGGTCCTtaaccaggtcgggt
ggatttTTGACCAGTTGAGGGGTAGGTCCTTGACCAGATCACGGGTAAAT
TCTTGACCAGAAAGTTAGATTCTTGACCAGCTGAGGGGTGGGTTCTTGAC
CAgattttttgtaagattttacgAAATCGGGTCAGTAAAATGAGTCCCGG
CCGGGTACATTCTTGACCAGTTTCAAaaactggtcaagaatccaaCCAGC
GACCAGTCCAACTGGACCTGAtccctttttcttattttctatcttctttt
attttgatccGGTTTGGTGGACCATTTCATGAAATATACTATCTTTACCT
ACAGACCTTATGCGGCTGCGGTCATAACTTAAAAGAATACAAAGGGCTGT
AATATACTATGATATAATTATATGCTActacacgttttattttttaataa
ggaacacgtttataaggaacttgaggctgaaaatggtctgagaaataagg
aattgttaaggaattgctcaggctgagaataaaaaatcaagttaagaAAC
AGCGAGAGTTCAATTTGAACTTGCACACATTAACAACAACCTAAATAAAA
GACGGAAAATATTGCTCAAACACCTTTCAATATGTCATAAAGACAAAAAA
TGCTGATAAAGAAGCTACACACTTAGcaaatccaaacttagcagttAAGT
AACTAAGGAActtgataaggaactttgaagctgaaactctctggcaaaat
aaggaactccaggctcggagccaagttaaggttccttataaaaaaaacaa
cttgtatatactaaagtctgttcacgataaatgtgcactcttttttcttt
tacctataactttcgaaggaattcttcaatctttataaattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040256-exon-sc0002366-1491911889:8004..9045 | TCONS_00040256-exon-sc0002366-1491911889:8004..9045 | Clytia hemisphaerica | exon |
| TCONS_00040256-exon-sc0002366-1510915933:8004..9045 | TCONS_00040256-exon-sc0002366-1510915933:8004..9045 | Clytia hemisphaerica | exon |
| TCONS_00040256-exon-sc0002366-1575043694:8004..9045 | TCONS_00040256-exon-sc0002366-1575043694:8004..9045 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002366 | supercontig | sc0002366:8004..9045 . |
Blast
The following BLAST results are available for this feature:
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