TCONS_00040238 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040238
Unique NameTCONS_00040238
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1075

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040238 ID=TCONS_00040238|Name=TCONS_00040238|organism=Clytia hemisphaerica|type=transcript|length=1075bp
GACAAATGTATATTCCTTCTATGGATTAGCGTACACACAAATACAATACT
GCAGACTATAAAAGGTGGTGAAAAATATTCAGCGTACAAGAAAAAATAAT
AGAGAGACAATTTTCCGAAGATACGAAATGCATTTCCAAAAACTGATCTA
AATCCATCGATAAGATTTGCATTTGAATCTGAGACAGTGTTGAACAAGAG
CACTTTGCCTGCTGATTGAgcttgaaaataaacaaaacactTAATTGCCA
CAATAGTTACACCAAACGCTATCTGTCCAGCTATTGTTGGTATCACTATT
AACTTTGGAAGAACCAGGAGAGACAAAAGACATCCAGCCAGTGAACAGCT
CATGACATATCCATAAAATATTGCCAAGGGTCCTGCAAAAACCTTTCGAT
AAACTAGCACCATCAGAAAGATATAGGTTGAAAATCCAACAAAAACATGA
AGCCAAGACAAAGTGTTCATCTGCCAATGAAAAGTATTAACGGAATACAA
AGTAACCATAGCAACTGCAGTCGTTACTGAATATCTTAAGACTCCATAAC
TTAGACATAGTGATAAAATATCTAATTTAAAGAGTTCTCTCCAGCCTAGT
AACCTCCTTTCTTGAGAAGCTTCTCCATCTGTGTTGCTGGATGAGTTATC
ATATCTGTCAACAAGAGGTTCCCGTTCGGGGTCCTCATCTTGCTCTCTTT
CACGTTCCTCAACAAGAGGTTCCCGATCGGGGTCTTCCTTCTGCTCTCGA
ACACGTGCATCAACAAGTGGTACCCGATCTTGGTCCTCCTCCTGCTTTCG
AACACATGTCTCAACAAGAGGTACCCGTTCGGGATCATCCTCCTGCTTTC
GACCACGTGCTATCGCAACAGCATCTTCACCAAGTTTTTCCAGATCTTTA
GAAAGATCGATAACCAAAAACCAAGATATTACAAAGATGACTAATGTTAT
TGCAGCGGTTAAAAATTGGATTGCGTTGTATTTATTGATTTTCCAGCTAC
CGATATGGATATTGACGTAGGAGAATAAGATAGGAAGACCAGGACCAACA
TTCATTCCAACAGAATAAAGAAATT
Run BLAST on NCBI

transcript from alignment at sc0002359:11238..24656+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040238 ID=TCONS_00040238|Name=TCONS_00040238|organism=Clytia hemisphaerica|type=transcript|length=13419bp|location=Sequence derived from alignment at sc0002359:11238..24656+ (Clytia hemisphaerica)
GACAAATGTATATTCCTTCTATGGATTAGCGTACACACAAATACAATACT
GCAGACTATAAAAGGTGGTGAAAAATATTCAGCGTACAAGAAAAAATAAT
AGAGAGACAATTTTCCGAAGATACGAAATGCATTTCCAAAAACTGATCTA
AATCCATCGATAAGATTTGCATTTGAATCTGAGACAGTGTTGAACAAGAG
CACTTTGCCTGCTGATTGAgcttgaaaataaacaaaacactTAATTGCCA
CAATAGTTACACCAAACGCTATCTGTCCAGCTATTGTTGGTATCACTATT
AACTTTGGAAGAACCAGGAGAGACAAAAGACATCCAGCCAGTGAACAGCT
CATGACATATCCATAAAATATTGCCAAGGGTCCTGCAAAAACCTTTCGAT
AAACTAGCACCATCAGAAAGATATAGGTTGAAAATCCAACAAAAACATGA
AGCCAGGACAAAGTGTTCATTTGCCAATGAAAAGTATTGACGGAATACAA
AGTAACCATAGCAATTGCAGTCGTTACTGAATATCTTAAGACTCCATAAC
TTAGACATAGTGATAAAATATCCAATTTAAAGAGTTCTCTCCAGCCTAGT
AACCTCCTTTCTTGAGAAACTTCTCCATCTGTGTTGCTGGATGAGTTATA
ATCTCTGTCAACAAGAGGTTCCCGTTCGGAGTCCTCCTCCTGCTCTCGAT
CACGTGTTTCAACAAGAGGTTCCCGTTCGGGGTCTTCCTTCTGCTCTCGA
CCACTTGCCTCGTCAAGTGGTTCGTGTTCGGGATCCTCCTCCTGCTTTCG
AACACGTGCCTCGACAAGTGGTTCCCGTTCTTGGTTCTCCTCCTGCTTTC
GAATGCATGTCTCGACAAGAGGTACCCGTTTGGGATCCTCCTCCTGCTTT
CGAACACGTGCCTCGACAAGTGGTTCCCGTTCTTGGTTCTCCTCCTGCTT
TCGAATGCATGTCTCGACAAGAGGTACCCGTTTGGGATCCTCCTCCTGCT
TTCGACCACGTGCTATTGCAACAGCATGTTCACCAAGTTTTTCCAGATCT
TTAGAAAGATCGATAACCAAAAACCAAGAAATTATAAAGATGATCATTGT
TATTGCAGCGATTAAGAATGGGATTGCgttgtatttatttattttccaat
TACCGATTTGAAAGTTGACGTATGAGAATAAGATAGGAAGACCAGGACCA
ATATTTATTCCAACAGAATATAAAAATTCATACCAACTAAGAAATTTGAC
CAATTCTTTGTCATTATAACATCTTCTGGATTCACctagaattgaaaaaa
tattatatagatATTGTTGAGATGATAGTTATTGAACATATGATGAACAC
ATGAGAATATCAACATTAAATGGTTTTTAAATCTGTGTGTCACAGACACG
TTAGAAACCCAACCCAACTGGAAAAATTGGGTCAAgctttcgtccccggt
gggaaaatttcCCTGTTTCAAAATTCGATGGAAAAACTGCACTCCACACC
TTCCACACTGGATTTTTTAGCTTTGAACAACAAGAATTTCTAACCCCTTA
GGGTTTCGATACAAATTTTTATCCTCGCTGTGGTAAATTCAACTATattt
taatcggattaacttgCGCGAAATTAAACTCGTAAAACTTAATCTACGTG
AAATATTGAAAACGCTTATTTCGGTGGAGGAATCTGCCAAAACTCCCTAT
TGGTTGCGAAGTATGtctattttcagcttttttcaggttcattcaaaatt
taatcCGACTGAAGTCGAATGTCTCGAAATTTACGACGTTTACGTTTACA
GACGAGCCATTTAGTTAGAAACGTCTTATAACCCTAtctttataactcga
aattATTCCTTATCTTGAACAAATATGTGTTCCCAGAGTTAAAAACATCC
ACCGTAGTTTGGCCAAAAAAGGCTATAGGGGGGGGGCAGATTTCACCGGA
AATCCGGCCGTCGAAATAGTTCCTTGGCCGGCTGAATAGTCGTCCGGCCG
GCGGAATTGTTATCTGGCCGGCGGAAAATCGGCCGTCGGGGAAAGTTATC
CGGTCTGCAGAAATTGaggtcgagttatttttttgagttatttttttgaG
CTACGAAAAACCGAGTTGTTGTGtcctttttcgtaatttttcgCTTGATT
ATAATAACCTTATCAACAATCTGGTACTTGGGAACCAAGTTCCTAAATCT
GACCCTGATCCCCCGTGATATAAGATTCTAAGGCAAGGGTGTGGTTTTGA
ATCATTTGATAAGGCCCACAAAGTCATATACAGTACTTTCCTTTGATAta
aaactattttatttcagAACTGAGACATGGGTGATATTAGTTTCTTATGG
TACGGCGCCTACTTTGAGATCAACTGATGCTTATATTTTTGCTTTATTAA
TACACTAAACGGCAATTCCAGAGGAAGGAACGTTACGTCACGCACATTTT
TGGCTGGATACCACCAGTAGGGACCTAGGGGTTCCGCGACCAATGAACCA
TTTGATAGCACCCATAGCTAGACGGGATAAAAATTTTGTTGGAATGGCCC
TTGACACCAAACCATTTAGGATGGGAATACAATGAGATCTATCATGCTGA
AAACGATAGAATTATGAGAATTATTTTAAATCCCAAATTGATAATGATAT
CTTTAGTTCTTTTACAATAACTCGGAAAAACTCAATTTTAATTTGAGTGT
CGGTCAATTATACTTGGGACGTGGTTTcactgaaatttttaaaaacccta
GAGAAAAGTTTTAGGAAGTAATCCAGAACGTGGTTTTACACAAACgtcgg
attgaaagtaaaatctattgttagatttcaaaaattgcagtcctcaaaaa
cgaAGGAACTGCTACAGACACAATCCGTTGTCATGATTGCGGCGgggcaa
ttttttttccatcagTGGACGCAGACCTGATTAAGCGActgaagacctga
attaacggcTGAAGACCTAAACCAACGGCGGAAGACCTGAACCAACGGCg
gaagacctgaattaacggcTGAAGACCTAAACCAACGGCGGAAGACCTGA
ATCAACGGCCGAATACCTGATTTAACGGCCGAATACCTGATTTAGCGGCG
CGTTCTAGGTGCGTTCTGGATGAGAAATAAGTggattcactttttcttga
ttGGGAGAGGTTAAAGATTCTCCTTTAGCCttttgggctttaaactcaat
gatcgggatacaatttttttctaaaaaattgattaaagatggtggatata
acTTAGTTCCCCTAAGGCAGGTCAGTGCTAGCTTTTACATTGAAATAGAG
TATAAAAAAGATCTTACCACATACTGCAGTTTGCAAGGATTCATTGATGC
CGCATAGAAATCGTCCAGTCATTACCGACCAAATATGCCAAGGGATTGAA
TACATTAAGTTCCCAATACATATGACACCCAAATTGAGCAAAAACACAAC
TCTTAAATTTCGCGTACAATCAATGTATCGTCCAAAAAGTATTCCGCTTA
TAAGATTACTAACAGCGAATAAAGTCTCCattacactgtaataaaatgtT
GCTTGAAGTAAAGATAACCCAAAGTTCTCCGAGAAGTAGTAGAGTACAGT
CACTTCCAGTGCTTGGCTTTCAATTCCGTAGAGGAGAATCAGAATACATG
CGAGAGCTGTAGTTCGAGTTCTATTTTTCTTCCATTCGAGATATTCCAAT
GAGGTTTCCATTATATGATTTCCAGTAACCTTTTGTATTCCTcagctaaa
atcaaaaatatgatttttaaaatcttcttaTTATGTATGGTTTTATAAAa
gaccctcttctcacagatccactgGGATCCTTTCCCACttaaaaaatttg
ccaaaatatcgtcccaggTGGAAAATGATACCCCAATTTTTGTCCTCAAT
GAAAATAACCaaataaaatattatgctatttttcccatctgCACTgagtt
ttctgacttgaaagcaaaaaaattaaaatccctAGCCATGAAAATATAGG
AattcaatccccattgagtttcattCCGTTATCTTTATCCCCACTGGAAG
AAAAATCCTAactggtctgtgagaagggggtgatATATGGCTTGctaatg
ttttttaagaaaatatctGAAATTCATTACATTACATACCAATAATGTTT
TCTCAAAATGCTAAACTATTCAAAATACACAAATGCAAAAATATGCGACA
ATTATAGcaatccaaaattaaaaaaattggatttaATGAACAAACTGTTA
TTCATCTCTAGGTTTTTGAGCTGGTGAAATTATAAAGTTTAGAGACCCTT
TTATAGCACTACAGTGTGTTCCGCAAAAAAAGTATATACTCAAATAATTA
AAGTCAACTTTTGAAATGAATGATGATcgtttttgaatgatttttaaaac
taCTGAAAGCACAGCTATTCAGTTTTCTACTGTCCAAATTTCATTTCGAA
CAATTCTTCTTTAGTGAGATATGACGCTTTTACTACACCCtgttgaagtt
taaaaaaagttgagatgcataatttttattaccaaagagttaattaattt
ttgattgacaggtcagttttttgtcaatttgaTGAAACTTTGCATTTTAA
AAGATTGACCTATGCAGCTTGGAAATTAATTATCTCATTAACAAAAGGCT
TTTCCATAGGAATTCTTTCAGCAGTGGAAAGAcgaatgatttttctttct
tttgcattaaaaatttagattttttttatctttcttccaATTTGAAATTA
ACGTTACTTTTTAGTGAAgtaattatgaaaaaatttacttGATCTCCGAT
GTTTAAAATCTACACCTTTGCTTACTTATGACTTGATATCTCTTGAATTG
AAAATTCTCTTGTATTGAATTTTTGACCACAAAAAGCTGGTTATGCTTTT
AGCTGGTATAAAAATTAAACTCATTATAAAGATAGTTTTCTCAGAGCTAC
GCTTTACTTTTTGAGTAGACTTTTTTGCGGAACACACTGTATATAGTATA
GTAGTAGTTTTAACCTTTGACGCACTTTTACACTTATTTAGAACAATTTT
ATCTCTAGACAACAGCAAATTAGAGTAAACGTGAAAAAACTTTAGtaact
gaattttttaaataaatgagGTATTATTTGTTACTAAAAGGTTACTGCGT
TTaatgtaccgtgaaaagcactgGCCGAAATGATACATCGACCTGTGCTG
ACCAATCcagtctattatttcgattcaataaagtgacatttccataatta
atagtttagtaattactgttatacatacatttgggaatcgtgtagaagat
ttcttttgaaagaaactcatttcttcaattacacttggagttTTCTGGGG
AATCCGCCAATAGTAAACATGTACattgatacagtctgctagataTTAGG
GAACTTAAGCATCTAGAACGGCGACTTTGATATGTAGACTGAGCTAAACG
AGGGGAGAATGCTCAGCGGAGAGATCAATAAACTAAATGGTTTATGGTTT
CGTACCATCGATCAACTTATATTCTTAATTCAacttataataatatttta
acagcATTTAGTTCTATGAAATATCTAAGGTCATACTCCTATCATGTCTT
TTTCGATCTCTGTCTTCGTTGTTTGATTCCGCAGCTTTTATAGCTGTGAA
TGGAATGTCGTTAGTTCTAATTCTGGTAACAGATATTGGCCTTGGTCCGT
ATGTATTTCATTTGTATATTTCTTGCCTTGTTAGTTTGAGGTGGTTTAAT
TGAACCTTTTTCTGATGGGATGGCCAGCTGGCTTTAAGCTCAAGCTGACC
ATATTaaaatatggtaatatttgctcgtCATCTTTGATTCCTTCTACATA
GTGATTAGATTGATACATGTGCGATAAAAATTCTTTACTTGGGGTTCCTC
AGAGATTGAtatgttctttgaaaactcaacctctgatattAATGCAGACA
ATGCAGTCGTGTCTATTTAGAGCTTTAGATAGAATGTGCGAGACTAGAGT
AGAGCCATTATTTCAATAAGAGTACTTTcattttcttgtcattttttatc
gCAATTTATTGTCTTAATTAACACCCTTTCTCTGAGACCCAGTGGAATAC
ACCCTACTGGCCACCCCAGTgaaaaaatcttccaaaaaagGTCCATAATG
GATGCTCAAAACCTGCAGGGGCATACCGTAAATCAtcgaataagcgcccg
ggcgcttatttaattttcagGCTCTaaagggggcgcttattcaagcgggg
cgcttatttttttatttcagaaatttgtatatcaacaaattcggaatttg
cttaaacttaactgtttcaaagggttgatttttcaaaaaaggatgaataa
aagaaaaattggaaaaatccaattgacaatttctatcattttattcttaa
tcgctttctttctttttaagtcacaagtatctactcaatatcttattcaa
tcaataacaatattcgagggggcgcttattcaaagggggcgcttattcga
gcggggcgcttataatattattttaactaaaagggGGTGCCTATtggagc
ggggcgcttattcgaggatttacggtagGGGCGTTCAAAAATAACAACAG
CTAGAACAATTTGATACACTTTTTAGAATAAACTGCTATAGATGGCATTA
TAAggattataagaacattataaggctttgtggactctaaaaaacccgat
ttctttggaaaatgggcaaaaatgctcacaaaatagtgaaaatataagag
aatgttaagaacatttctaggcttgaaactcaaaaagttaaggacatcct
aaggcttaaaaaaattgaatgttctCATAAAATGTGGCATAGCTCAGAGC
TTTAAACAAGTAAATTCTATTATTTAATTAAATTTACAGGTACTGTAGTT
AAAATGGAGTATGACGCCTGAAATACCTAAATTTATCTTAAAGTAAGCTA
AAGAAACATCAAATGATAATCAATGAGATGAAATAATAGGATGAAACATG
AAAGGATTTTTCTCTTACCGCTTTCAATAAAGCGTCGTCTTCAAATAGCC
ATTTGTATGGAAGCCAGGGACGACGTATGTTTGAATGTGGAATTATCGGA
CACAGGTGTTCGTAACAAACTGACAAATGATTGATTGATATTGAAAGTAT
GACAAAatgtgttcaaactgaaaaataaaattgatacaAATTGATCTAAG
TTGATAGATtacaaatttgattgaaatgtACTTCAGAAAAATTGAGTTGA
CAAAGCCTTGATATAAAAAATACAGTATAGAAAAAATTAGCTCACCAACC
TGCTAAATATGTGAAGCGATgtgtaaaaataattccaaatgttcaaaatt
tgtagaaTGTAGAAAAACAGATTCAATTTGTTCACTGATTTCTTGAAAAC
ATTCTGATTTCTTCATACCACACTCACGCCTTATGATATGTGATTGAATG
ATAGTGAAAAAAGCTGAAATGAGATCTGATATGCTAGATCTCGAATGTTC
ACGGGAGACATTAATTAATAAATATAAAGAACTAATTGACAAATGACGTC
GTAATGACCTATGAgtataaaatttgttttttaatttcttttcttataaa
taaaatgatATCATTTGCACGTTCGTGCTGCATTCCCCCAACGTGGAAAA
GTGAAATGTGAATCCATCCAGAAACAGTTCAGTTCTTAAACATTGCATTG
AGTTCTTGCAAAATATCCATTTCACCAAGATGATGATGACAACTAAATCT
CTGACACACCTGGTAGTTTTATCATAGTCCATTATAGAAACACTGGTCtt
gaaggcttttgtctctttttattattaaaagatggagcttacgtaccgaa
attgatttattttgcaaactttttgatcatttgactagaaaatagaccaa
tcccaagaggattttttggtaacgtgatcaaaaagtatgcaaatcacagc
ttgtcttttgtttgtaacaaaagaaaatttaacaaaaagctaaaacaaaa
cattgccagaccggtgttttttataatgactatggttttACGTTTTGCAG
TTTCATTTGAATTGACATACTCCTTATCAACTTTACGAAGTTCACTATCT
TTACTAACATGAACAGTTTGTATTCTTCCAAGATGATATGTCTGGGCGTC
TGGGCAATGGAAGAATCGTTCTTAAGGAAAAGGACAATATCACCCTTTTT
CAAGTGCTTGTCGTTCTTAAACCACTTTGGTTGTGAAATAAGCTTTGGAA
CATGTGAGATCAACCAGTTTTCAAACCACGTGTTGAAGATGTCGATATTC
GTTTGTTACGTCCGAGAAGAACTCTGTTGGGTGTAATAAGGTCCATGCTC
TCAAAATCAGATGTGATGGAACCAAGTGCGAGAGGCATGTTGTTGAGACT
GTTCGAAATCTCTGATGCCACCGTTTCCCATTGAAGGATTGATAGTCTTG
ATTGAGAAATCTTCCTCTCGATCGATCTTGAAATCTCCTTGATTTTGCGT
TCAATCTTTCCTTGGTAGTTGTGTCCACCAACTGGACTAACGTCGAATTC
AATGGATTAGTTACGATGAAGTCTGGCTCGTATTCAATTTTGACGTCTTC
ACATCCTTTGATAAGTTGGCTACAAGAGTAGATGAAGAGCCTCTGAGGAT
AACCATGGTGAGATGAAAATTGTACGAACGCTTGGATGAAGGCAACAGTG
CTATAGTTGTCCATGATCTTGATTGATGTAGCTGAAGTCGTCATTCAGCA
GAAGACCGTCAACCAAAGTTTGATTGTTGATCGTCTGTGGTGATTGCAGT
ATGCCTTTACAGGCCCTACAAGATCAATCTGAGAATAATAAAATGCAGGG
GAAAATGTTAATTGAGGAGACGAGAGCTTGCCTATTTCAATGCTCACAGT
CTTCTTTTCAATGTACCGACATCGAGTACAGTTTCGTTTGATACGTTTGA
CAATTTCACGTCCTTCAAGAACGTATGCTTTCTTAAGGACAAAACGTAGA
ATTGATTCGTTAccaccactgacctttatataccctggacaaagcttctc
aatctcagccaagcaaaatctttgatcggagttttttgaaaattggtacc
ctaatgtcggcactactcgatagcggtgtaaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTTGTTGT
AGACAGATGGCTTGTTGAAATGTTTGACCTCCATCGTTGCTTTGCGAAAG
AAATAATCTTCCGCTTGCTTGATGTCGTCTTTGGATGGACCATTACTGGA
TTGATCGAACTTTTCTGTGACTGTTCTCGTCTTTTTCTTGTTGTTTCTCA
TCCATCTCATCTTCCTGATGCTCTTGATAATTATTGCTAAAACCCTAacc
attttcattgtttcagaaaacaattgatgttctagctttgtccgcaaagg
acaactgtcatggcggctcgaagatgtctgatttaaaaaaatgtttatcN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNcgagaaatcagcaaaaatctgttacttgtatatccagtgtata
ataaatccttggtttATCTTGCTTTTACTTCCGATGGAACAACAAAGTTG
ACGTTGCATGTAACATCAAGAGGTGCCTTTAAGCCTAATTGACTTTAATG
ACTGCGTTTCTTTGTGAAACTCTTGAAGATCTTTAGAGGTAAGAGTAATT
TTGCTTACCTTTTTAACAGGAAACTTGGATTCATTTTGATACATCCAGTC
TTGGCCGATGAACCGTTCTGACTTTGGCTGGACCTCTGATAACTGGACAC
CTCTCCTTGTTGCTACGTCGGCCATCATTTGATTGGAGTTTATGAATCTC
CAGATGTTTGTGAGTCGATGGACTTCGATTAGTCTGTTTCGAACCAACTG
CTTGAGTTGAAGCTCAGTGTTTGATATCCAATGAAGCACAATGGTGTTGT
CTATGATTTTCAAGCATCCTTTATCCTTTGTGATGTTTTTGGAATGCTCT
TTTGACATAATATAATATGACgacgcgaaaattttaaaacctatctcaat
cattttcaaactgTTGCGATCTTTTTTAAACTGTCgggatatttttcaag
ttgtcatgaTAATCTTCAGACTGTCgtgatatatttttttacattttgtt
aaatgcatgtaacaaccttctactcagaatcatattcgaactcgatactt
ttttcgtAACACCCTGTATAAGagtaagaatttctgtccaactatattca
ctcagaaGATTTGGATGCCAGAGAAGATGCCAGAGCGTGAAGTAATATTA
GAAGATATTACAATGGTGTATATCGTGAAAATAAACAATTAAGTCAATGC
TTAAAAAATACAttagctttttgtttttgtcgagGCTGCAATCCACTAAT
AGGGGCGAGTACTCTTAAAATAGCTCTTACTGCAATTTCTTTTATAGATA
GTAAAAGATCACTTAGTAAGATTAAGGCTGACATGAAAGAAATGCTTACT
GGAAAGTAANgtatatagctcgttggatagcttagagtctcctctttctt
ttgggcgccttcggcgccgcccgattgaggaagggcgtggtgggcggcgg
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNaaaaataacgatttctaactcaaactgggcattacaggagggcttcgc
cctcctatatagcccatgtcgtatatatacgacatcggcacttaaagggt
taaatgcATGTAACAACCTCTATTCAGAATCATattcgaactcgatactt
tttttcgtaACACCCTGTATAAGAGTAAGattttctgtccaactatattc
actcagaaGATTTGGATGCCAGAGAAGATGCCAGAGCGTGAAGTAATATT
AGAAGATATTACAATGGTGTATATCGTGAAAATAAACAATTAAGTCAATG
CTTAAAAAATAcattatctttttgtttttgtcgagGCTGCAATCCACTAA
TAGGGGCGAGTACTCTTAAAATAGCTCTTACTGCAATTTCTTTTATAGAT
AGTAAAAGATCACTTAGTAAGATTAAGGCTGACATGAAAGAAATGCTTAC
TggaaagtaaaaaatcaaacaatgctTGGAAATAATGAGAAATTGAATTG
ATGTTTTTCTACCCGGTCTGCtcttctaaatttaattttagtgTGACAAA
TGTAAATTCCTTCTATGAATTAGCATACACACAAATAATATACTGCAGAT
TATAAAAGGAGGTGAAAAATATTCAGgatataagaaaaaataatagaaag
ttGATTTTGCGAGGATACGAAATGCATTTCCAAAAACTGATCTAAATCCA
TCGATTAGATTTGCATTTGAATCTGAGACAGTGTTGAACAAGAGCACTTT
GCCTGCTGATTGAGCTTGAAAATAAACAAAGCACTTAGTTGCCATAATAA
TTACACCAAAAGCTATCTGTCCAGCCATTGTTGGTATCACTATTAACTTT
GGAAGAACCAGGAGAGACAAAAGACATCCAGCCAGTGAACACGCCATGAC
ATATCCATAAAATATTGCCAAGGGTCCTTCAAAAACCTTTCGATAAACTA
GCACCATCAGAAAGATATAGGTTACAAATCCAACAATAACATGAAGCCAA
GACAAAGTGTTCATCTGCCAATGAAAAGTATTAACGGAATACAAAGTAAC
CATAGCAACTGCAGTCGTTACTGAATATCTTAAGACTCCATAACTTAGAC
ATAGTGATAAAATATCTAATTTAAAGAGTTCTCTCCAGCCTAGTAACCTC
CTTTCTTGAGAAGCTTCTCCATCTGTGTTGCTGGATGAGTTATCATATCT
GTCAACAAGAGGTTCCCGTTCGGGGTCCTCATCTTGCTCTCTTTCACGTT
CCTCAACAAGAGGTTCCCGATCGGGGTCTTCCTTCTGCTCTCGAACACGT
GCATCAACAAGTGGTACCCGATCTTGGTCCTCCTCCTGCTTTCGAACACA
TGTCTCAACAAGAGGTACCCGTTCGGGATCATCCTCCTGCTTTCGACCAC
GTGCTATCGCAACAGCATCTTCACCAAGTTTTTCCAGATCTTTAGAAAGA
TCGATAACCAAAAACCAAGATATTACAAAGATGACTAATGTTATTGCAGC
GGTTAAAAATTGGATTGCGTTGTATTTATTGATTTTCCAGCTACCGATAT
GGATATTGACGTAGGAGAATAAGATAGGAAGACCAGGACCAACATTCATT
CCAACAGAATAAAGAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024417XLOC_024417Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040238-exon-sc0002359-1491911889:11238..11683TCONS_00040238-exon-sc0002359-1491911889:11238..11683Clytia hemisphaericaexon
TCONS_00040238-exon-sc0002359-1510915933:11238..11683TCONS_00040238-exon-sc0002359-1510915933:11238..11683Clytia hemisphaericaexon
TCONS_00040238-exon-sc0002359-1575043694:11238..11683TCONS_00040238-exon-sc0002359-1575043694:11238..11683Clytia hemisphaericaexon
TCONS_00040238-exon-sc0002359-1491911889:24028..24656TCONS_00040238-exon-sc0002359-1491911889:24028..24656Clytia hemisphaericaexon
TCONS_00040238-exon-sc0002359-1510915933:24028..24656TCONS_00040238-exon-sc0002359-1510915933:24028..24656Clytia hemisphaericaexon
TCONS_00040238-exon-sc0002359-1575043694:24028..24656TCONS_00040238-exon-sc0002359-1575043694:24028..24656Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002359supercontigsc0002359:11238..24656 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.087183	0.0771085	0	0.122295	0.557016	0	0	0.292172	0	0.313927	0	0.449207	0.283781	0.630797	0.171751	0.624882	1.24988	0.321641	0.523717	0.217011	0.131339	0.0561744	0	0.11109	0.384776
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040238 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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