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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040228 ID=TCONS_00040228|Name=TCONS_00040228|organism=Clytia hemisphaerica|type=transcript|length=874bp
gaaTAAAGGTATTTCTAGTAACGTGTTACATCCTTGAGTATAAACAAATA
TGGCTTCTTCCTACCCCAAAGAATATGGGTTTGATgttaaatttattgaa
aaactggATAAGGACAATATAAAGTGTGCCATATGTTTTATGGTTTTACG
AGAACCGTTGCAAGGGTCAAGATGTGGTCATAGGTATTGCAAGAAATGCA
TTGAAGAATTCCATGAAAAGAACCCAAAGAAATGTCCGCAAGATTGGCAG
GACAATGAGTGGTTTAAAGACTTGGGAAAGGAAAGAGAGATTCTTGATTT
GAAGATTCGATGTAAAAATCATCGCGATGGATGCACCTGGCAGAACGAAC
TTCGAGATCAAGAGGAGCATTTGAAGACATGTGATTTCGAAACTATTCAA
TGTAATCTACGATGCGGGGAACCTGTGTTACGCAAAAACCTCCAAAGACA
CTTGGACAAAGACTGCCCTTTGATTTCAACGTGCGAGTATGAGGAATTCG
GCTGTCTTTTTAAGGGTACAAGGGACCAACTGTACAATCACATGTCACAA
GCGATCAGTCAACATTTCTCCCTTGAAATGAAGCATGAAATTCGAAACAC
CAAAAAAGAATTCAGTGACAAATTACACGAAAAAGATCTCAGAATTCAAG
AGATAACAAAGGAGTTTGATGCCCAACTGAAGGAAAAAGATGAAGAAATT
AAACGCCTGAAAAAAGATGTCGAGGAGACTAAAAAAGATTTCACCCGAGT
TATCAATCAAACTAAAACTGAACAACAAACAGCCATCGAAGAAACCAAAA
AGGATTTCACCCGGGTTGTCAATGAAACCAAAAATGAACAACAGAAAGCC
ATCGAAGAAACCAAAAAGGATTTC Run BLAST on NCBI transcript from alignment at sc0002355:8960..19052+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040228 ID=TCONS_00040228|Name=TCONS_00040228|organism=Clytia hemisphaerica|type=transcript|length=10093bp|location=Sequence derived from alignment at sc0002355:8960..19052+ (Clytia hemisphaerica)
gaaTAAAGGTATTTCTAGTAACGTGTTACATCCTTGAGTATAAACAAATA
TGGCTTCTTCCTACCCCAAAGAATATGGGTTTGATgttaaatttattgaa
aaactggATAAGGACAATATAAAGTGTGCCATATGTTTTATGGTTTTACG
AGAACCGTTGCAAGGGTCAAGATGTGGTCATAGGTATTGCAAGAAATGCA
TTGAAGAATTCCATGAAAAGAAgtaagtttttttattcaaatacagggtg
tccctaataaaagtatcgagtttaaACATGCGATTGAGCCCtttttacta
ttcccctgttgcataGTTTTATATacgattctttacaaacatgttttaat
tgttgcgtttttctcatgatcgtaatttcgttgcatttgttaacaggcag
agtatgtttttattgttacgtgatgacaaagaaaaaagagggagagctta
aaatacaattttgtgaatacacacttaaaactttctactcaatcgcatgt
tcaaactcgatacttttattagggacaccctgtatttatCGTTTTACTTC
TCATTTATCTTTTTTTCGATCAAGCGTTTTATTGCTCAAACTCACTACCC
TATTGGGAAATTATTCCGTGTAGTCATATGGTTTCCTTTAAGAAACTTTT
ATCACTGATAGCAAATTTGCATCTTTATGAATGGCTATCGAAAGCATCCA
GCGAGGTTCCTGAGTTAAAAATTATGATCTGTTTTTCAAAGCTAAAGGAA
AGGGAAAACAGGTATTTTAGGGAAACAGGCTATCATCCGCTGCTTCTGAG
CTATGAGCTAAATCATTAACCACATACTAAAAATATACATTTTGGAAAAC
AAATACAATgtggagactttaaaaacaaatgagAGATGAAATACTTGACA
GGTTAGTAATAATAACTCGTTTTTTAGCCCAAAGAAATGTCCGCAAGATT
GGCAGGACAATGAGTGGTTTAAAGACTTGGGAAAGGAAAGAGAGATTCTT
GATTTGAAGATTCGATGTAAAAATCATCGCGATGGATGCACCTGGCAGAA
CGAACTTCGAGATCAAGAGGTTTGATNAAATCATCGCGATGGATGCACCT
GGCAGAACGAACTTCGAGATCAAAAGGTTTGATTCCTTTCCGTAATGTGA
CATTCACAACTGCAGTTTAGGCTGAAAACTTTTAAGGGGGGATAAGAAGC
TTAATTTAAAACTactgttttgaaaaatagattAGGATCTCGAAGTTGCG
GAAATGGTCCGTCCTTCTGAAATTTCTCccaaaaagctttttttctcact
ttttatgGCTCATTTGCTCTCAAATCAAGCACTACTATACACATTGGGAA
GCCTAAAAACCTAAAAACGTGCCCTTAACGGCTGCAGCTTTAGAAACTTA
CCCCCCTCATAGTTGTATACTGACtggaaatataattttaacTCCCGTTC
GATTaaatacatgcttttttatgagaaccaGTAGATTTTGGTTCAGGCTG
GGCTGTTGTTAGTTTTTCAAATTCTCAGGCTTATGTCCTGACGATGTTTT
TAATAGGCTTAGTTTCTtaacttaaaaacttaaaatgggtttttaatatt
ttaaaaatctattaaaatcaATACTTTCTTGGTAATGTCTGAACTCTGAG
CCTCatgattgttcttaatttgttcttagcttttggcccattttcagcct
catgttcttataaaaaagcgtgcattacgattttacaatattttgttctt
ttgtagGAGCATTTGAAGACATGTGATTTCGAAACTATTCAATGTAATCT
ACGATGCGGGGAACCTGTGTTACGCAAAAACGTAAGAACGACAACCGTCT
TTATAGACAGAATTTTAATTAATCTTTTACTGAATTTTTAGGGTACACAT
GTAATATTCCTATACCTTATCTGAATTTATAATCTCGGGATgttctcaat
ttctttttaaatttaataaaGAACTATTAGTTTCCtttgaaacaaacaaa
acttaTCAGGTACAAATCTTACTTGTGTGCGCTAATCAATGCCATTGGTA
TTGGACTCAATAAACTGAAGAAGCGAACTTTAAATGTTATATTTAAACGT
TATATTTAAATTTTAGCTCCAAAGACACTTGGACAAAGACTGCCCTTTGA
TTTCAACGTGCGAGTATGAGGAATTCGGCTGTCTTTTTAAGGTAATTTTC
TGAAAGCAAATATTCGAGGATCGACCTTACttttgtctcccgaatagacg
gagGGGGGGTCCAAATATacagggggtaggaaaatttttctaaattctag
taagcgggggggatggaataagcaATAAACAAGATGactcagagtcgaaa
atttcgcatagtGCTCGATTAttcatagatgaaataatcatattaaacGA
CTGGGGAGTACTAAGGTTCGAGAATATCAGGGCAGACCTGAGAAAACTGG
CCATAGGGAATAAAGCTACCCTTAAAGAGACAAGGCAAAAAAAGAGCACA
TTTTCATTTatgacttttcaattttttcgtacTTAAATAATTCAGAGACT
TGGGAAGGTCAAAAACAGATTTTTAGCATCAGCACATACCTGACACCTAG
TTACTACCCACCCTCACCATTAATAGAATGCAATAAATAGAACGGGACTA
GAAAACATCTTTATTGTCACATAAAAATGACCTGTCCCAGTGTGGCCAAG
TTACATAAATAAATATCTTttactatttacaaaaatattaaaagtttata
CCTGGTAGAGAGGTAGGTAAATTCTGTACagagattcaaaattttcaatg
ttcaaTTATACTTTAGTGTCAAAATGTTGATTGATTGACTTCAATAAATC
TTTTGCTAGACGCAAGATCAAGTtggataattaaaaactccagcacaAAT
CTCATTTACTTCACTTTCCAATGGATGCAAGGGTAGCCTCAGTTATTGTT
GTTCTTTCCCTCGCATTCATTTTGGGTTGACCCAGGCAAAGACCCCTGCG
AGTGAGAATCAAAACCTCAGTTGCCTGTGTagtaaccaaggtcaatgacc
actataccaacAATATCACGAAGCCCCAATCCAACATGCCAGACTCTCCT
ATTcgatacaatcaataacttttttcCAATCCATGACCAATCGATAATTA
GATAATAAGGCCCCGAAGctgttttgtgatgacgtcatagggactttttt
gcagcgtgattatgtacgtgatttggaaatttttccttcgtgattgcgtg
attagaggtcaaaacgtgattgtgatttgaaaattttttgagccGTGCTA
tgtgatttggaatttttcaaagggatgcgtgattgtccatttttttggtg
atttgcgtgatatcgtgatcagagttaccgcttGGTAATCGATAGATTGG
AtatcaattgattttgataatcGCTAAATCAATATTTTAAGGGAAGCTCG
ATTGGCTATAGATTGATCGATTTTCCATCGATTGACTTTAAAGATGCTCG
ATTGATCCAGAGGAATGTatagagatggaaaaacagcttcttgaaaacaa
tggaaaaacggctcgtcatataccaggtctttTGCCCTTAAGgaagttta
tgtcgagtaaataggtttcttttgttgtcgctataaaaaatctagcgtgt
tgtgacaaaattcttttgtttgaagCCTGATTATGCGGAAACTtctaggg
cttatattttgggtacacttCTCCTATACGAAAATGTACCtatatatctt
cttgctcagaatttcttagcgattctactgatataaccacATCATGACCG
CAgtataatatggaaagctagagctcgagaaaattataacttcatcttga
ttttactcgacttctgacagttttacaagaactaatttaatatcattgcg
ttaagaatttcttttgctatacattggtaaaaatattgctccttattctt
aaaaattgaactagtaatcggcaaaaaaggaaaaacaaattttcattttt
atcgtcaaatcatgcagaaaccgtccgatttgtatggcgagccgtctttt
ctgcatttaatgacctaatcaacgtttttacaatagaattttcaatagaa
gtgatcgttgaactttgagtaatcagaaaagctgtttttccatctcttta
cattcctctgcttATATAGATTGACACCCCTTAACATAAATTCCTCTGTG
AAATACTTAGTAAATGATAATCTGTCTTACAACACAACTTAATCAAATAT
ATCAACATTATTTTCTacctgtaaaaatgaagatcatacgTGTCTGTGTT
GTTGTTTTATGTGTAGTGATGTTCAAGTTAGTGCATttactagcctggat
atccaagctcaaaattttagaaaaaataaaatttacctcaacatacaaag
ttctaaaattatagagcttggtctccctagagaatgaaagNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
agagaatgaaagtgaaaacccatgtttcctagccaacccagggcagcaaa
acagaaattaataaaaagcagtcttacaagatctaaaactattttaaACA
TCCaaatattacaccaaagtccataaaaaagtttgcatgcattatcatga
ccaaccatatgttttcttggaaaatgaacttgcctctgttttcttctttt
ttatgttttcatgtaacagaaagccctatcttcactagcaactggaggac
tatcctatttatgctttagaattgctcaacgccgtgtagattggccCTTA
CGGATTTAGCGAAGTGAGCGCAAGCAAGCGGACTGCATTCTCTTAaagag
aatgcaaatcgctctagggagaccaggctgtaaaccagaacataaaatat
caaaaactagactgtgaaatagtttacagcctggatatccaggctatgca
TTTACTAGGGACCGTgtacaaatattgttttaatCGTTTGAGAAAAAATC
GTATAGTGAAAAGGTATGAAACGATTTAGTAgccaaaaatttgaagaaaa
atcgtTTTCTAAACGATGACTGACAAACTATGAAAATGAATTTGTTTTCA
TtcgttttaaattttgaaaatcgtttACAACCGTCTTAAATATCCAGATT
TCGTTTATTTGtactcaaaatcgttttggtgtaCTCAAAATAGTTTTGGT
gttctcaaaatcgttttggtgctctcaaaatcgttttggtgctctcaaaa
tcgttttggtgctctcaaaatcgttttggtgcTCTCAAAATCCTTTTGGT
GCTCTCAAAATCGTTTTAGGTTTATATAGATCGTTCTTTTAAATAGAAAA
ACGTTCCATCCGAAGGCAAAACGTTTCAATAAAATGAAATCGTTTTTCCT
CCATTAAAATTCAGTTCGTGTACCAGACATGGCCAAGTAAAGGTACAAGA
GTGGAGAGAAAAtacatacagtatatggcccccaaaacggagacgtcCCC
CAAAAcagaggttttcattaaaaagaagattctgacttgtagatttatca
gaattaaacgatttttgtttattttgaaagaatgatggttatacttaaaa
atgagNgagttatgaaaatggggtataggaaactttctacacctaatacc
gttcagaaaatgcaaatacatctgtgactttagaggctgggtaaaagata
tagcatcttgaaggtcaaccagtatNNNNNNNNNNNNNNNtttggagccc
tagaatcagcattgataaaaccgaaaattctaaatatgagaaaaagcaaa
aaatcttggaattctatacctatcaccttgagttaataatttacaacaaa
aaattaacattatatataaaatttttcgctgaatcagcaaaaacggcaaa
ttctgtcattttttttcaaaatatataggagaaaaatatctttaaagctt
aatattttcagtttcagttaagctttttttctaaaattttcacagcttat
tccatacatgaatggaactattNNNNNNNNNNNNNgaacttgattaagac
gttgttaaatcaaaattgtcattttgaaaatttctaaattttcagtttgg
actttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNtgaaatatttcataaaaatcataaattttac
atccatcggctcgtaaatttaagggaaaacacaaatatgttcatagtttt
tcccccttttACCACCgggttaataatttgattttagctatACCTCCGTT
TTAGGGGCCCCAAACCTACATTTTGACAatcaggggtatactgtaaaaat
tttatcaaataaatttatgcccaaaaccctctaaatcatatttcaaaact
atggtcaaaattttgtattcataNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNcaaaaatttttgtaaaatctcttttcctccagatttgagagaag
tttcaaatttgatcgccgttttgggggccacatactgtaggtcaatataa
aaaatatatggactCTTAATTGTCGGTGTGAATGTTCATgctattttgat
tcccctacccattagctttccaaaaatgtatacagTAAcgagtgctttga
ctaaaaaagtcgcacgattttaaaaaatttcctcCTACTAATAAAGCTTT
AGTGTTTTCGAATATTAAAAGTGGCATACGGTTGGGCTTATCAGAATAAA
TGAACATGTTTGGCGAGAATTGAGAGCTTTTGGATACTAATTTAAATAcg
ttcatttttattcactgTTTAAAAGGAACATTCTACCACATGAATTTTGA
AGATTGGTTGAAGTTATAAACAATATgatcaaaaaacttaaaaatatcgT
TTTTCCAGATAAAAATCAATCAAGACGATTCCCAAAGtacattttgtatt
tttgaaagagCTCTGTTTTACTGCATTGGTGCATTTTAGGGTATTTTGTT
TAATATTTCAGATATTTGTTTCATAGGTTAGATATTCAATTACTAGTTTA
GATATTCGTTTAATAGTTTAGATATTCGTTTTAGAGGTAAGAAATTCGTT
TTGATAGTTTCAAATTCGTTTAATTGATCGTTTGAACTTgaagactttct
tttcaaatcgtTTTACCACTTTTTGTTCAaagaaaaacgtttaaaatcgt
TTCATAACGTTTCAGCCTGACATCGCTTTAAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCT
TTAAATTGGTACGATTCTTAAACGATTAAAATCATTTGGGAAACGAAAGA
AATCGTGTAAATTCGTTGAAAAGTGGAACAATATTTGTACACGGTcccta
actacacaaacataaaatactatgctaaaaGAAATATCAACCTCTTTAAG
CActctaaaaacatcaaaaacacgaTAAAAATACAAACAACCAAGGCATA
AAACCTGACAGCATGCTGAATACGCCATTTGTAATGAGCAATGTTTACAA
ATGCTTGGTTACGTCTACGTAGCACTTGCGGACTGGAATTATTAAACAAA
ACGCTAAATTTTATCTTAGCAAGTTAGTCCATCTTTAGAATTTTATTAGA
ATATTCGAGAAGTTTTTAACACCGTGGCCTCGTGgtcaagcactttcgtt
tttaaaattttattctaCACCGACGAccaccgcgaaaggctatcgtaata
ctttcgctatgcgaaattaaaaaagtctttaacaaatgaacacgcaAAAT
AAGAActaatactaacaaaaaggaaaatttttaccAAGTTTAAGGTTTAT
CTACACTGTaatgaaatattgaattattcgaaatTAATTAGCgagggggg
tcttaataagagcgtaAGAGGGATATatcttttttctcttaacaattagc
ggggagGGACATCTATTTGGGAGACAAGAATAGAAGGGGGCGAAAAAATC
CTTAAACAATGTACATTCGATGAATAATTATGATCCTTACACATAGTTCT
AGTGGGGTCTGGGTAGGAAGATTCAATTTTTACCCCTATTTGAGGAACAA
TATACCCCCCTTACGTAGCAAATGCCTTCCNTTTTTaccttaacaattag
cggggagGGGCGTCTATTTGGGAGATAAGGGGGCGAAATAATCCTTAAAC
AATGTACATTCGATGAATAACAAGAAGCCGGaccggcgtgaaggtccagc
tgacgtggcaataaccgaatgtcgttcgtaccgggttccttaagtgaccA
CGCAAAAAATTTCATTACCACCCTCCACTCTGAACTCCTATTCTTTGGCA
CTTTTTTTGtattgctaagttttgaaagtttttgatgcatttctcgaaat
ttcgaaacttttgccactgacgggattcgaacccactatatacaaagcac
ctatgattagaacgccagcgccttaaccactcggccatcgagtcacaact
gcattaaggagttcaaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAaaccctacctgaccctacctga
aacaaccctttaatctaaccgagaaatttgactctactaccaattcaatc
taaaacataggtcaaacatcgcgcgggtaggcggggcaaaaattctagat
cggcggttggtttagcctggacttgttaatttattgcgcgcacacgCCCC
GACAAAGataaaatcttttcgatcagttgctttttaaaggtccattctgc
tgcgcgctggaccaattaTGACCCTTACACATAGTTCTAGTGGCGTCTGG
GTGGGaagattcaatttttcaccTATTTGAGGAACACTATCCCCTTACAT
AGCAAATGCCTTCCTTAAATATAAAGACCTTCTTAGAAAACAGGAGACCA
AATGAACCCtttacaagattttttgaaaatctcatgTAAGAAAGCACCTC
ACGCTCCCCAGGCTAGTGGAGGTGATAAAAACTATGTTACAGGAGTCTAT
TATTCGAACGATGGAGCTTATTTTTGTGTTATAATTATGTGTTATCTTaa
agaagaacaatttttttctaatgcGTTTTGGTTTCTGTAAAATCATCAAA
TCACGGTGATATATTAACTGTTTAATCTTTCAGGGTACAAGGGACCAACT
GTACAATCACATGTCACAAGCGATCAGTCAACATTTCTCCCTTGAAATGA
AGCATGAAATTCGAAACACCAAAAAAGAATTCAGTGACAAATTACACGAA
AAAGATCTCAGAATTCAAGAGATAACAAAGGAGTTTGATGCCCAACTGAA
GGAAAAAGATGAAGAAATTAAACGCCTGAAAAAAGATGTCGAGGAGACTA
AAAAAGATTTCACCCGAGTTATCAATCAAACTAAAACTGAACAACAAACA
GCCATCGAAGAAACCAAAAAGGATTTCACCCGGGTTGTCAATGAAACCAA
AAATGAACAACAGAAAGCCATCGAAGAAACCAAAAAGGATTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040228-exon-sc0002355-1491911889:8960..9181 | TCONS_00040228-exon-sc0002355-1491911889:8960..9181 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1510915933:8960..9181 | TCONS_00040228-exon-sc0002355-1510915933:8960..9181 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1575043694:8960..9181 | TCONS_00040228-exon-sc0002355-1575043694:8960..9181 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1491911889:9887..10028 | TCONS_00040228-exon-sc0002355-1491911889:9887..10028 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1510915933:9887..10028 | TCONS_00040228-exon-sc0002355-1510915933:9887..10028 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1575043694:9887..10028 | TCONS_00040228-exon-sc0002355-1575043694:9887..10028 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1491911889:10716..10790 | TCONS_00040228-exon-sc0002355-1491911889:10716..10790 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1510915933:10716..10790 | TCONS_00040228-exon-sc0002355-1510915933:10716..10790 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1575043694:10716..10790 | TCONS_00040228-exon-sc0002355-1575043694:10716..10790 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1491911889:11076..11150 | TCONS_00040228-exon-sc0002355-1491911889:11076..11150 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1510915933:11076..11150 | TCONS_00040228-exon-sc0002355-1510915933:11076..11150 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1575043694:11076..11150 | TCONS_00040228-exon-sc0002355-1575043694:11076..11150 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1491911889:18693..19052 | TCONS_00040228-exon-sc0002355-1491911889:18693..19052 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1510915933:18693..19052 | TCONS_00040228-exon-sc0002355-1510915933:18693..19052 | Clytia hemisphaerica | exon |
| TCONS_00040228-exon-sc0002355-1575043694:18693..19052 | TCONS_00040228-exon-sc0002355-1575043694:18693..19052 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002355 | supercontig | sc0002355:8960..19052 + |
Blast
BLAST of TCONS_00040228 vs. Swiss-Prot (Human)
Match: TRAF4 (TNF receptor-associated factor 4 OS=Homo sapiens GN=TRAF4 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.744e-27 Identity = 61/151 (40.40%), Postives = 83/151 (54.97%), Query Frame = 2
Query: 77 GFDVKFIEKLDKDNIKCAICFMVLREPLQGSRCGHRYCKKCIEEFHEKNPKKCPQDWQDNEW---FKDLGKEREILDLKIRCKNHRDGCTWQNELRDQEEHLKTCDFETIQCNLRCGEPVLRKNLQRHLDKDCPLIST-CEYEEFGCLFKG 517
GFD KF+EK K + C +C +REP+Q S CGHR+C C++EF + KCP+D ++ + D E ++L L IRC + +GC W LR + HL TC F I C RC + R++L HL DCP CE+ GC F G
Sbjct: 3 GFDYKFLEK-PKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CGCDFSG 150
The following BLAST results are available for this feature:
|
