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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040192 ID=TCONS_00040192|Name=TCONS_00040192|organism=Clytia hemisphaerica|type=transcript|length=1114bp
CAACAATTCAGGACTAGGTATAtttccaatgaaataattttcaaactgtC
TTAAGGGTCATGCCCTTTTTTGCTAAGTATTTAAGGAAATGTAACTAGTT
CAAACTCTACCTCTAGCCTTTGAAGATTTTAGTTACTCGTTCAAAGCTTG
TAAGGTAACGAAAGGCTCCTTTACCTTTTGATTGGCGGGAAGAGTGTTGT
TTATTCGCTCAAGCAtcgtcatttttttctataGCACAGAAACTACCCCT
TACCTGTCTTCATGAAAAAGACTGTTTAGATGTCGATTAGTTTTGGACGT
ACTGTATGGAGGGTGCCTTTTACACTTCGGGACTGAATTTTGATCGCAGC
GCCCTCTTATTGAAGAGAACGTGCTGGCATTTTTGGATTGGGTTCGNGAT
CGCAGCGCCCTCTTATTGAAGAGAACGTGCTGGCATTTTCGGATTGGGTT
CGCATTGTAAATGGTGATGTATGTACATGTAGGCGGTGGATAAATTAGCA
ACTAGGTTCTTTAATACCAGAATTACGCAAGCCTAACTGTGCCATGGCTG
GTTGTGCATCCTCGCCAATTGTCCCAAAATTAGAGAAGAAAGGAGGTAAG
CAGAATCTTGAGCAAACTTTTACCTGTCTCAAAGCCATGTCTGTCTAGGG
TAAAGGGAGGCAACACTCCttctcacagccccactgggaatcctccccac
tggaaaaaatggccaaaattttgtccccactgaaaatagaTCACCGCAAA
TTATTGTGCTactttttccaactgaattttcagctcaaaaacaatagaat
tcaaatccTCAGTCATGAGCAAAATGGGAATAttaatccccattgagttt
tggtccgctttttttacccccattggctgaaaaaatctcaccgggtctgt
gagaaaggtgTGTGATGCAGGTAAAAAAGATTGGATGATAACAGTAGGAA
AACACTTTTGGAAATTTCCTGCCATTTTCGAATCCCCTTTTCATCCTTTC
TTGTCTTGTAGACATTTCGGATACGAACTTCGAGACACAGCACGTAATGG
GATAGTGACAATCGATGGAACAAAATACGATTTTGATGGtaagtttattt
ttttggaaatgagc Run BLAST on NCBI transcript from alignment at sc0002349:22209..23322- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040192 ID=TCONS_00040192|Name=TCONS_00040192|organism=Clytia hemisphaerica|type=transcript|length=1114bp|location=Sequence derived from alignment at sc0002349:22209..23322- (Clytia hemisphaerica)
CAACAATTCAGGACTAGGTATATTTCCAATGAAATAATTTTCAAACTGTC
TTAAGGGTCATGCCCTTTTTTGCTAAGTATTTAAGGAAATGTAACTAGTT
CAAACTCTACCTCTAGCCTTTGAAGATTTTAGTTACTCGTTCAAAGCTTG
TAAGGTAACGAAAGGCTCCTTTACCTTTTGATTGGCGGGAAGAGTGTTGT
TTATTCGCTCAAGCATCGTCATTTTTTTCTATAGCACAGAAACTACCCCT
TACCTGTCTTCATGAAAAAGACTGTTTAGATGTCGATTAGTTTTGGACGT
ACTGTATGGAGGGTGCCTTTTACACTTCGGGACTGAATTTTGATCGCAGC
GCCCTCTTATTGAAGAGAACGTGCTGGCATTTTTGGATTGGGTTCGNGAT
CGCAGCGCCCTCTTATTGAAGAGAACGTGCTGGCATTTTCGGATTGGGTT
CGCATTGTAAATGGTGATGTATGTACATGTAGGCGGTGGATAAATTAGCA
ACTAGGTTCTTTAATACCAGAATTACGCAAGCCTAACTGTGCCATGGCTG
GTTGTGCATCCTCGCCAATTGTCCCAAAATTAGAGAAGAAAGGAGGTAAG
CAGAATCTTGAGCAAACTTTTACCTGTCTCAAAGCCATGTCTGTCTAGGG
TAAAGGGAGGCAACACTCCTTCTCACAGCCCCACTGGGAATCCTCCCCAC
TGGAAAAAATGGCCAAAATTTTGTCCCCACTGAAAATAGATCACCGCAAA
TTATTGTGCTACTTTTTCCAACTGAATTTTCAGCTCAAAAACAATAGAAT
TCAAATCCTCAGTCATGAGCAAAATGGGAATATTAATCCCCATTGAGTTT
TGGTCCGCTTTTTTTACCCCCATTGGCTGAAAAAATCTCACCGGGTCTGT
GAGAAAGGTGTGTGATGCAGGTAAAAAAGATTGGATGATAACAGTAGGAA
AACACTTTTGGAAATTTCCTGCCATTTTCGAATCCCCTTTTCATCCTTTC
TTGTCTTGTAGACATTTCGGATACGAACTTCGAGACACAGCACGTAATGG
GATAGTGACAATCGATGGAACAAAATACGATTTTGATGGTAAGTTTATTT
TTTTGGAAATGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040192-exon-sc0002349-1575043694:22209..23322 | TCONS_00040192-exon-sc0002349-1575043694:22209..23322 | Clytia hemisphaerica | exon |
| TCONS_00040192-exon-sc0002349-1510915933:22209..23322 | TCONS_00040192-exon-sc0002349-1510915933:22209..23322 | Clytia hemisphaerica | exon |
| TCONS_00040192-exon-sc0002349-1491911889:22209..23322 | TCONS_00040192-exon-sc0002349-1491911889:22209..23322 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002349 | supercontig | sc0002349:22209..23322 - |
Blast
The following BLAST results are available for this feature:
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